| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,885,611 | G→T | 80.0% | R628S (CGT→AGT) | yoaA ← | putative ATP‑dependent helicase, DinG family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,885,611 | 0 | G | T | 80.0% | 583.1 / 194.7 | 309 | R628S (CGT→AGT) | yoaA | putative ATP‑dependent helicase, DinG family |
| Reads supporting (aligned to +/- strand): ref base G (34/28); new base T (140/107); total (174/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
GTCGTTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCTGT > CP009273/1885465‑1885759 | gtcgtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGaa > 1:2102945/1‑149 (MQ=255) tcgtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAAc < 2:1198643/149‑1 (MQ=255) cgtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAAcc < 1:3261460/149‑1 (MQ=255) cgtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAAcc < 1:1167112/149‑1 (MQ=255) ttCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGc > 1:4444845/1‑149 (MQ=255) ccACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCAc > 1:1784553/1‑149 (MQ=255) acaGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACgg < 2:3431352/149‑1 (MQ=255) acaGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACgg < 2:3370800/149‑1 (MQ=255) aGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGc > 2:2153648/1‑149 (MQ=255) ggCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCaa < 2:4263505/149‑1 (MQ=255) cAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCa < 2:434086/149‑1 (MQ=255) agagCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCAc > 1:919169/1‑149 (MQ=255) gagCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACg > 2:1547502/1‑149 (MQ=255) gCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACggg < 1:313733/149‑1 (MQ=255) gCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACggg < 1:198557/149‑1 (MQ=255) cAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGt < 2:4534140/149‑1 (MQ=255) ggCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGc > 1:199966/1‑149 (MQ=255) ggCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATGACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGc < 1:946604/149‑1 (MQ=255) ccTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGt < 2:2068150/149‑1 (MQ=255) gTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAAGTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAAGGTCACGGGTGCGTGgcgc < 1:299963/149‑1 (MQ=255) cgcgGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcgg < 1:748594/149‑1 (MQ=255) cgcgGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCgcgg < 1:3493350/149‑1 (MQ=255) gcgGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcggg > 2:2913288/1‑149 (MQ=255) gcgGTATCGATAGCCAGAAGTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCAGCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcggg < 1:1381836/149‑1 (MQ=255) ggTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcgggcg > 2:3190479/1‑149 (MQ=255) tATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGggcggc > 1:2587416/1‑149 (MQ=255) gATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCACTGTCACGGGTGCGTGGCGCGGGCGGCAGAc > 1:1705189/1‑149 (MQ=255) aGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTgg > 1:4553755/1‑149 (MQ=255) gAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCgaga > 2:3680035/1‑149 (MQ=255) gAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCgaga > 2:1081010/1‑149 (MQ=255) gAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCgaga > 2:1081053/1‑149 (MQ=255) aaTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGaa < 1:2031386/149‑1 (MQ=255) aTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGaaa < 1:2121249/149‑1 (MQ=255) aTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGaaa > 1:4378538/1‑149 (MQ=255) aTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGaaa < 1:4531193/149‑1 (MQ=255) ttCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAAc > 1:372634/1‑149 (MQ=255) gCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTc > 2:4005433/1‑149 (MQ=255) gCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTc < 2:4639092/149‑1 (MQ=255) gCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTc < 2:2242726/149‑1 (MQ=255) tGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAAATACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTcgcg > 1:4474388/1‑149 (MQ=255) gggTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCgcgc > 1:2226578/1‑149 (MQ=255) gggTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCgcgc > 2:2277470/1‑149 (MQ=255) ggTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGcc > 2:342477/1‑149 (MQ=255) ttCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCACTGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTaa < 2:4390906/149‑1 (MQ=255) ttCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTaa < 2:546927/149‑1 (MQ=255) tCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAg < 1:100315/149‑1 (MQ=255) tGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGAc > 1:3856388/1‑149 (MQ=255) tGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGAc > 1:1661808/1‑149 (MQ=255) gCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAATGTCGCGCCGTAAGGACg > 2:1738710/1‑149 (MQ=255) gCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACg > 2:4179641/1‑149 (MQ=255) ttAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCa < 2:201139/149‑1 (MQ=255) ttAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCa < 1:3999870/149‑1 (MQ=255) aGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATc > 2:1427455/1‑149 (MQ=255) gATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCa > 2:3398922/1‑149 (MQ=255) aTCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCAc < 2:1156294/149‑1 (MQ=255) tCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCAcc < 2:2447850/149‑1 (MQ=255) aaTAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAg > 1:79005/1‑149 (MQ=255) aTAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGc > 2:1265472/1‑149 (MQ=255) tAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGcc > 1:480644/1‑149 (MQ=255) gaaaaaGGCGCGCATCATACCAGACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGcc < 2:776183/148‑1 (MQ=255) aaaaaGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCg < 2:3844595/149‑1 (MQ=255) aaaaGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGa > 2:2734483/1‑149 (MQ=255) gcgcgcATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTc > 2:543790/1‑149 (MQ=255) catcatACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACaaa > 1:875433/1‑149 (MQ=255) catcatACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACaaa < 1:2405164/149‑1 (MQ=255) atcatACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAAt > 2:936951/1‑149 (MQ=255) tcatACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATc > 1:2740277/1‑149 (MQ=255) tcatACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATc < 1:1037298/149‑1 (MQ=255) taccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAcc > 2:180481/1‑149 (MQ=255) accatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCa > 2:3985856/1‑149 (MQ=255) atacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCa > 2:1305207/1‑149 (MQ=255) tacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCAc > 1:1879412/1‑149 (MQ=255) tacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCAc > 1:4269690/1‑149 (MQ=255) cTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGc > 2:4151929/1‑149 (MQ=255) tCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGcc > 1:1092734/1‑149 (MQ=255) tAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGa < 1:739382/149‑1 (MQ=255) tAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGa > 2:2379817/1‑149 (MQ=255) tAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGa > 1:680787/1‑149 (MQ=255) aCAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtc > 2:3248359/1‑149 (MQ=255) aCAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtc > 2:4102425/1‑149 (MQ=255) cAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcg > 2:2140043/1‑149 (MQ=255) aaaTTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgt < 1:2652786/149‑1 (MQ=255) aaaTTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgt < 2:3040031/149‑1 (MQ=255) aaaTTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgt < 2:876347/149‑1 (MQ=255) aaTTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgtc < 1:2277470/149‑1 (MQ=255) ttACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCgg > 2:653943/1‑149 (MQ=255) tACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGc < 2:371862/149‑1 (MQ=255) aCCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCg > 1:1322032/1‑149 (MQ=255) ccTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGt < 1:2524676/149‑1 (MQ=255) ggaggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTcgc > 2:3926076/1‑149 (MQ=255) ggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGac > 2:1767731/1‑148 (MQ=255) ggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGaa > 1:1610155/1‑149 (MQ=255) aTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATc < 2:3562746/149‑1 (MQ=255) tGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCa < 1:4320273/149‑1 (MQ=255) ggTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAg > 1:4271881/1‑149 (MQ=255) tCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGc > 1:2380617/1‑149 (MQ=255) cAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCt > 1:283476/1‑149 (MQ=255) aGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAc < 1:557466/149‑1 (MQ=255) aGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAc > 1:3406212/1‑149 (MQ=255) aaCTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAccccc > 2:1017738/1‑149 (MQ=255) | GTCGTTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCTGT > CP009273/1885465‑1885759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |