| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,946,583 | G→A | 24.4% | V21I (GTC→ATC) | yecN → | MAPEG family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,946,583 | 0 | G | A | 24.4% | 755.6 / 245.1 | 353 | V21I (GTC→ATC) | yecN | MAPEG family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (156/111); new base A (44/42); total (200/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
Only 100 of 356 total aligned reads displayed.
GTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAG > CP009273/1946435‑1946730 | gTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATg < 1:2364767/149‑1 (MQ=255)gTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATg < 2:793922/149‑1 (MQ=255) tCCGGCTATTCCACAGCTATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGGTGTTATTAATGAAGTTCTCTTTTGATATc > 1:2082904/1‑149 (MQ=255) ggCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGtt > 1:3861881/1‑149 (MQ=255) gCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTc > 1:742287/1‑149 (MQ=255) aTTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGcc > 1:3783492/1‑149 (MQ=255) tCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTg < 2:3243076/149‑1 (MQ=255) caGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATATACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGCTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGaa > 2:1545011/1‑149 (MQ=255) caGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGaa < 1:1438349/149‑1 (MQ=255) caGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGaa > 1:1822599/1‑149 (MQ=255) caGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGaa < 2:1926487/149‑1 (MQ=255) cAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGc < 1:2522796/149‑1 (MQ=255) aTCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAg > 2:3083925/1‑149 (MQ=255) tcttctCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGt > 1:780372/1‑149 (MQ=255) tcttctCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGt > 1:4311428/1‑149 (MQ=255) cTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGcc < 2:2272504/149‑1 (MQ=255) tGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCt > 2:2759401/1‑149 (MQ=255) ttGCCACCTCTCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGc < 2:4280733/149‑1 (MQ=255) gCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGa > 1:1003005/1‑149 (MQ=255) cACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcg < 1:1826045/149‑1 (MQ=255) aCCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcgg > 2:2707706/1‑149 (MQ=255) aCCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcgg < 1:2190728/149‑1 (MQ=255) ccTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcggc > 2:3558846/1‑149 (MQ=255) ccTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcggc < 1:3394893/149‑1 (MQ=255) tATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTACGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcggcgg > 2:486451/1‑149 (MQ=255) tATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGAcggcgg > 2:4500065/1‑149 (MQ=255) aTAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGtttt < 1:3686457/149‑1 (MQ=255) aCAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCg > 1:3170049/1‑149 (MQ=255) cAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGa > 1:2991834/1‑149 (MQ=255) aGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGaa > 2:3691996/1‑149 (MQ=255) ggTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTATCGAAc > 1:3986049/1‑149 (MQ=255) gTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACt > 1:2924253/1‑149 (MQ=255) gTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTAGCCTGCGAATTCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACt > 1:533679/1‑149 (MQ=255) aTCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCaaa > 2:2781626/1‑149 (MQ=255) tCGGCCATTTTACAGGGAGTTTGTATGGTAAGCGCGCGGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAg < 2:1450169/149‑1 (MQ=255) gCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTATCGAACTGCAAAgcgc > 2:75701/1‑149 (MQ=255) ccATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCt < 1:4468601/149‑1 (MQ=255) cATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTa < 2:1625445/149‑1 (MQ=255) aTTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTAt > 2:3750089/1‑149 (MQ=255) aTTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTAt < 1:920999/149‑1 (MQ=255) ttttAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTAtt < 1:1503906/149‑1 (MQ=255) ttttAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTAtt < 2:2073869/149‑1 (MQ=255) ttttAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTAtt > 2:1690476/1‑149 (MQ=255) tttAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTc < 2:557285/149‑1 (MQ=255) tttAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGAGCTATTc > 2:1084255/1‑149 (MQ=255) tAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGc > 1:4558099/1‑149 (MQ=255) aaaGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCa < 1:1319323/149‑1 (MQ=255) aGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCAtt > 1:3451847/1‑149 (MQ=255) aGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCAtt < 1:2156997/149‑1 (MQ=255) aGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGGTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCAtt < 1:4104986/149‑1 (MQ=255) gggAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTc < 2:1183526/149‑1 (MQ=255) gAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCAt < 1:2452382/149‑1 (MQ=255) gAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCAt < 2:445/149‑1 (MQ=255) aGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATg < 2:2256889/149‑1 (MQ=255) gTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGACTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATgg > 2:263847/1‑149 (MQ=255) tttGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGt > 2:3451448/1‑149 (MQ=255) ttGTATGGTAAGCGCGCTGGACGCCGTTTTAAGTGCGTTGTTATGAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTa < 1:1714915/149‑1 (MQ=255) tGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACTGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTaa < 2:2562806/149‑1 (MQ=255) tGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTaa < 2:284940/149‑1 (MQ=255) tGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTaa > 1:3605953/1‑149 (MQ=255) gTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAAc > 1:3779865/1‑149 (MQ=255) tAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTg < 2:1169802/149‑1 (MQ=255) aaGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTgg < 2:684785/149‑1 (MQ=255) aaGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTgg > 2:62798/1‑149 (MQ=255) cgcgcgGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAat < 2:4171482/149‑1 (MQ=255) cgcTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAatat > 2:4654568/1‑149 (MQ=255) gcTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAatata < 2:4614136/149‑1 (MQ=255) cGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCa < 1:4125716/149‑1 (MQ=255) gCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCAt < 2:604884/149‑1 (MQ=255) gTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGACTGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATcgc > 2:1831974/1‑149 (MQ=255) gTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATcgc > 1:1013122/1‑149 (MQ=255) ttttAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCCTcgcg > 2:882325/1‑149 (MQ=255) ttttAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGGTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATcgcg < 2:2153900/149‑1 (MQ=255) tttAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGa > 1:4631965/1‑149 (MQ=255) tAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGAtt < 1:2793899/149‑1 (MQ=255) aGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATtgt > 1:2576739/1‑149 (MQ=255) aGTGCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACTGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATtgt < 2:1244004/149‑1 (MQ=255) gTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATACGCATTCATGGTAAAGAGGTGGAATATATTCCCCTCGCGATtgtg > 1:1155043/1‑149 (MQ=255) tGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGc < 1:324512/149‑1 (MQ=255) gCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCt < 2:3019138/149‑1 (MQ=255) gCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCt < 1:699871/149‑1 (MQ=255) gCGTTGTTATTAATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCt < 1:3091272/149‑1 (MQ=255) ttattaATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCt > 1:2236822/1‑149 (MQ=255) tattaATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTg > 1:3619193/1‑149 (MQ=255) ttaATGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGtt > 2:2379685/1‑149 (MQ=255) aaTGAAGTTCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTa < 1:2611310/149‑1 (MQ=255) aTGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTAt < 1:1383266/149‑1 (MQ=255) gAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATgg < 2:843111/149‑1 (MQ=255) aaGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGa > 2:3195207/1‑149 (MQ=255) aGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGaa > 1:472436/1‑149 (MQ=255) ttCTCTTTTGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAaat > 1:2048960/1‑149 (MQ=255) ctTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAaatgaat < 2:4075520/149‑1 (MQ=255) ttttGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAaatgaatg < 1:1575538/149‑1 (MQ=255) ttttGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAaatgaatg < 2:2579501/149‑1 (MQ=255) ttttGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAaatgaatg > 1:2205388/1‑149 (MQ=255) ttGATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGgc > 2:7148/1‑149 (MQ=255) gATATCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGgcgc > 2:2017138/1‑149 (MQ=255) aTGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCa < 1:585042/149‑1 (MQ=255) tGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAg > 2:1559807/1‑149 (MQ=255) tGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAg > 1:271154/1‑149 (MQ=255) | GTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAG > CP009273/1946435‑1946730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |