| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,004,533 | G→T | 89.3% | T151T (ACG→ACT) | yedL → | putative acyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,004,533 | 0 | G | T | 89.3% | 447.3 / 34.7 | 202 | T151T (ACG→ACT) | yedL | putative acyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (15/9); new base T (61/104); total (89/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 204 total aligned reads displayed.
AGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGA > CP009273/2004387‑2004678 | aGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGActct > 2:2923066/1‑149 (MQ=255) gATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTa > 2:3844534/1‑149 (MQ=255) tGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTGAAGCAATg > 1:846564/1‑149 (MQ=255) cTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCTATGCGa > 1:3550522/1‑149 (MQ=255) ttCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaa < 1:1096405/149‑1 (MQ=255) cATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaaaa < 1:1816013/149‑1 (MQ=255) aTCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaat < 1:4753209/149‑1 (MQ=255) gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaataat < 2:4564333/149‑1 (MQ=255) gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaataat < 2:4008972/149‑1 (MQ=255) gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGTCTCTATTCGAAaataat > 1:2387283/1‑149 (MQ=255) ccTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATg < 2:4727492/149‑1 (MQ=255) cTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGa < 1:151517/149‑1 (MQ=255) tGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGaa < 1:698772/149‑1 (MQ=255) tGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGaa < 2:2857901/149‑1 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAAt < 1:1465662/149‑1 (MQ=255) cTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGc < 1:3402343/149‑1 (MQ=255) cTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGc < 1:2707144/149‑1 (MQ=255) aGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CAt < 1:4273744/149‑1 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGa < 1:3245853/149‑1 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTATCTAATCGAAAAAAATTAATTGA‑CATGa > 1:4668275/1‑149 (MQ=255) aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACAATATTCGAAAAAAATTAATTTC‑CATGaac > 2:2072156/1‑147 (MQ=255) cGGGGACACAGGCTGGATTTACGGCCTGCCATCAAATTTATTTGAAGCTTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGcc < 1:3615026/149‑1 (MQ=255) gggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCa < 2:2904729/149‑1 (MQ=255) gggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCa < 2:3676441/149‑1 (MQ=255) gggTACACAGGCTGGAGTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCa < 2:2904196/149‑1 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCCTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTGTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCCTTGCCACACTGCGAAAATAATGAATTGC‑CAAGAGCCCGAc > 2:3262584/1‑149 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGAc < 1:1267633/149‑1 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGAc < 1:1266120/149‑1 (MQ=255) acacAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGTCACAAAGCGAAAAAAAATAATTGA‑CATGATCCacaaa > 2:4409231/1‑145 (MQ=255) acacAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAATTGACGCGATTCGAAAAAAATTAATTTC‑CCATAGCCAGAcc > 1:565794/1‑148 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACgca < 2:4256375/149‑1 (MQ=255) ggCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTTATTTTTACTATTCGAAAAAAAAGGATTTC‑CATGTGCCCGACcccgca > 1:1651733/1‑149 (MQ=255) ggATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATAATTGACACTATGCGAAAATAATGAATTTCACAT‑AGCCAGACGCAGCACAtt > 2:3419597/1‑149 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAAAGAATTGC‑CATGAGCCAGACGCAGCACATTCt > 2:197357/1‑149 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGACTCTATTCGAAAAAAAAGAATTGC‑CATGAGCCAGACGCAGcacaatat > 1:305814/1‑145 (MQ=255) tttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCtt < 2:2415626/149‑1 (MQ=255) ttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTg < 2:164375/149‑1 (MQ=255) ttACGGCCTGCCAGCAACTTGATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTg < 2:4514589/149‑1 (MQ=255) cGGCCTGCCATCAACTTTATTTGAAGCCTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCAt < 2:2913320/149‑1 (MQ=255) tGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGAc < 2:3656040/149‑1 (MQ=255) tGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGAc < 1:4785012/149‑1 (MQ=255) tGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGAAAATATGCGAAAAAAATTAATTTA‑CAAGAGCCAGACGCAGCACAAAATTGCATTCGAc > 1:1434804/1‑149 (MQ=255) gCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAAATTACACTATTCGAAAATAATTAAATTC‑CAGGAGCCCGACGCAGCACAATCTTTCAATAGACg > 1:2367608/1‑149 (MQ=255) gCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTAATCGATTCGAAAATAATTAATTTC‑CATGAGCCCGACGCAGCACAATAATTCATTAGACg > 1:3476579/1‑149 (MQ=255) gCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCAAACAGTCGATTTTTATCATTGACGCTATTCGAAAATAATTAATTTA‑CATGAGCCAGACCCAGCACAATCTTGCATTCGaag > 2:4545063/1‑147 (MQ=255) cATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTACTCAATTCGAAAAAAATGAAATTG‑CAAGAGCCAGACCCAGCCCAATCTTTCAATAGAccgg > 1:2633307/1‑146 (MQ=255) tCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACACTATGCGAAAAAAATGAAATTC‑CATGAGCCAGACGCAGCACATTAATGCATTCGACGtgca > 2:3540668/1‑148 (MQ=255) aTTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCttt < 1:2216022/149‑1 (MQ=255) aTTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCttt < 1:2216342/149‑1 (MQ=255) aTTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCttt < 1:4025278/149‑1 (MQ=255) aTTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGAATCTAATCGAAAAAAATGAATTTC‑CATGAGCCAGTAGCAGCACAATCATTCCTTAGACGTTCTGCGCCgtt > 1:4354796/1‑149 (MQ=255) tttGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTAATAGATGCGAAAATAATGAATTTC‑CATGAGCCAGACGCAGCACAATAATGCATTAGACCTGCTGCGCCtttt > 2:2888612/1‑148 (MQ=255) tGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttatt < 1:881422/149‑1 (MQ=255) aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat < 2:1852802/149‑1 (MQ=255) aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat < 2:2246215/149‑1 (MQ=255) gCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATc > 2:2762801/1‑149 (MQ=255) cATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCa < 1:3844780/149‑1 (MQ=255) aTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATTAATTTC‑CATGATCCAGACGCAGCACATTCTTGGATTCGGCGTGCTGCGCCGTTATTTATccc > 2:1387372/1‑147 (MQ=255) tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGAATCTATGCGAAAATAATTTATTGG‑CATGAGCCAGACGCCGCCCATTCTTTCCTTCGACGTGGTGCGCCTTTATTTATAAcc > 2:603692/1‑149 (MQ=255) ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACca < 2:1176026/149‑1 (MQ=255) gTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATGATTGACTAGAATCGAAAATAATGAATTTA‑CATGTTCCATAAGCAGCACATTCTTGCCTTCGAAGTGCTGGGCCATTATTTATAAAcag > 2:200776/1‑149 (MQ=255) gTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAATCGAAAATAATGAAATGC‑CATGATCCAGAAGCAGCACAATATTGCAGTCGACGTGCTGCGCCGttatttataaacac > 2:3682907/1‑143 (MQ=255) cGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCGAAAATAATTAATTGC‑CATGAGCCAGACGCAGCACAATATTTCATTCGACCTGCTGCGCCATTATTTATAAACAACAgg > 2:3339065/1‑149 (MQ=255) tGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATTCGAAAAAAATGAATTGC‑CATGAGCCAGACGCAGCACAATATTGCATTCGAAGTGCTGCGCCGTTATTTATCACCAGCAGGaaa > 2:644354/1‑149 (MQ=255) gATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAAc < 2:1089271/149‑1 (MQ=255) tGCGATCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGcc < 2:3527452/149‑1 (MQ=255) gCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCt < 2:86846/149‑1 (MQ=255) gAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg < 2:1661601/149‑1 (MQ=255) gAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg < 1:4597101/149‑1 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGt < 1:4644661/149‑1 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGACTCAAAGCGAAAAAAAATAAATGC‑CCAGAGCCACACCCAGCACAATCTTGCATTAGACCTGCTGCGCCATTATTTTTAACCAACACGAAACGCCCTGt > 2:1215376/1‑149 (MQ=255) ccGTTTGCTGATTATCGCCTTGATCCACCCAGTCGATTTTTATCAGTGACTCTATGCGAAAATAAAGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTcc < 2:3957187/149‑1 (MQ=255) ccGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTcc < 1:2307820/149‑1 (MQ=255) cGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCa < 1:4502225/149‑1 (MQ=255) tttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTAATATAATCGAAAATAATTTAATGA‑CAAGATCCAGACGCAGCACAATGTTGAATTAGTCGTGCTGCGCCTTTATTTATAAACAGCAGGAAACGCCTTGTCCATa > 1:1174833/1‑149 (MQ=255) ttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATTCGAAAATAATGAATTTC‑CATGAGCCAGACGCAGCACATTAATGCATTCGACGTGCTGCGCCTTTATTTATAACCAGCAGGAAACGCCTTGTCCAAAg > 2:1558746/1‑149 (MQ=255) ttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAg < 2:3750224/149‑1 (MQ=255) tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGa < 2:2686794/149‑1 (MQ=255) tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAATCGAAAATAATTAAATGC‑CAAGAGCCAGACGCAGCAAATTCTTGCATTCGACGTTCTGCGCCTTTTTTTATCAACAGCCGGAAACGCCGTGTCAATAGa > 2:4684707/1‑149 (MQ=255) ttATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGcccc < 1:3310374/149‑1 (MQ=255) aTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAAAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATAACCAGCAGGAAACGCCTTTTCCATAGACGccccgt > 2:776531/1‑147 (MQ=255) tCGACTTGATCCACACAGTCGATTTTTATAATTGACTCGAAGCGAAAATAATTAAATGC‑CATGTGCCAGACGCAGCACATTCTTTCAGTCGACGTGCTTCGCCGTTATTTATCACCACCAGGAAACGCCGTGTCCATAGACGCCCCATc > 1:4342585/1‑149 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACAt < 2:850174/149‑1 (MQ=255) gATCCACACAGTCGATTTTTATAATTTACGCTATGCGAAAATAATGAATTTC‑CATGAGCCAGACGCAGCACAATCTTTCATTCGACGTGCAGCGCCTTTATTTATCAACAGCAGGAAACGCCTTGTACATATACTCCCCATCCACATgc > 2:3159275/1‑149 (MQ=255) tCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATgcgc < 2:1023829/149‑1 (MQ=255) acacaGTCGATTTTTATCAATGACGCTAAGCGAAAATAATTAATTGC‑CATGAGCCAGAAGCAGCACATTATTGAATTCGACGTGCTGCGCCTTTATTTATCAACAGCAGGAAAAGCCTTGTACATATAAGCCCCTTACACAAGCGCcac > 2:4203452/1‑149 (MQ=255) tCGATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaaa > 1:1000583/1‑149 (MQ=255) gATTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAAcc > 2:2171844/1‑149 (MQ=255) aTTTTTATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct > 1:618610/1‑149 (MQ=255) tttttATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCGCATGCGCCACAAGAAACctc < 2:3978505/149‑1 (MQ=255) tttttATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctc > 1:2743550/1‑149 (MQ=255) ttttATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctct < 1:2911393/149‑1 (MQ=255) tttATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTa < 1:4201876/149‑1 (MQ=255) tATCATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAtt > 2:4374938/1‑149 (MQ=255) cATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCa > 1:2308299/1‑149 (MQ=255) cATTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCa > 1:4698490/1‑149 (MQ=255) aTTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg < 2:2884025/149‑1 (MQ=255) aTTGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg < 2:2883974/149‑1 (MQ=255) tGACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTAGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTg > 1:1346097/1‑149 (MQ=255) gACTCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGa > 2:4499082/1‑149 (MQ=255) | AGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGC‑CATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGA > CP009273/2004387‑2004678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |