| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,108,459 | T→A | 9.2% | N307Y (AAT→TAT) | wcaM ← | colanic acid biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,108,459 | 0 | T | A | 9.2% | 928.4 / 65.2 | 300 | N307Y (AAT→TAT) | wcaM | colanic acid biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base T (126/146); new base A (18/10); total (144/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.68e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 312 total aligned reads displayed.
GAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACTGCCGACAA > CP009273/2108311‑2108607 | agaTTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAAtatta < 1:3874016/149‑1 (MQ=255) gaTTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAAtattat < 1:2615314/149‑1 (MQ=255) aaTGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTatcaatca < 1:614908/149‑1 (MQ=255) cgcgCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGaaa < 1:1505627/149‑1 (MQ=255) gcgcAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAAt > 1:988149/1‑149 (MQ=255) gcAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGGGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTAACAATCACGAAATTg < 2:4750458/149‑1 (MQ=255) gcAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTg > 2:2740050/1‑149 (MQ=255) aaTTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTc < 1:1627313/149‑1 (MQ=255) aaTTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCAATTAAATATTATCAATAACGAAATTGTc > 1:2038337/1‑149 (MQ=255) tttATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTcac > 2:3972107/1‑149 (MQ=255) taAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAAcc < 1:2258953/149‑1 (MQ=255) taAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAAcc > 2:4203254/1‑149 (MQ=255) aaGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCg > 1:1027160/1‑149 (MQ=255) gCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTa < 1:2041858/149‑1 (MQ=255) cAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTaa > 2:1436561/1‑149 (MQ=255) aaGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTaaa < 1:2176688/149‑1 (MQ=255) aaGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTaaa > 1:2006456/1‑149 (MQ=255) gATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATa < 1:1107068/149‑1 (MQ=255) aTGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAg > 2:714082/1‑149 (MQ=255) aTGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAg > 1:536012/1‑149 (MQ=255) tGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGc > 2:2205175/1‑149 (MQ=255) tGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGGAAATAGc > 1:3993049/1‑149 (MQ=255) gAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCg < 2:2775553/149‑1 (MQ=255) gTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGAc > 2:4619114/1‑149 (MQ=255) gTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGAc < 2:1974199/149‑1 (MQ=255) gTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGAc < 2:576265/149‑1 (MQ=255) tCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTcgc > 2:4051810/1‑149 (MQ=255) tCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTcgc > 1:4598152/1‑149 (MQ=255) aGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGtt < 2:3405892/149‑1 (MQ=255) ttGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTAt < 2:3741063/149‑1 (MQ=255) gAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTCTCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCa > 2:1614019/1‑149 (MQ=255) gAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTGTCa > 2:4469591/1‑149 (MQ=255) tCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGcc > 2:1553161/1‑149 (MQ=255) tCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAAGGcc < 1:4217343/149‑1 (MQ=255) tCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCt > 1:3126061/1‑149 (MQ=255) cACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCtt < 2:2066237/149‑1 (MQ=255) cACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCAGAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACACCCGTAAATAGCGTCTGTCGCGTTATCAATGCCCGCtt < 2:2854872/149‑1 (MQ=255) cACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCAGAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCtt < 2:3035063/149‑1 (MQ=255) ccGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACTTGGGGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCt < 1:4121255/149‑1 (MQ=255) cGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCtt < 1:3964447/149‑1 (MQ=255) cGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCtt < 1:1701464/149‑1 (MQ=255) ggAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCACTCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTa < 2:1877564/149‑1 (MQ=255) gAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTAc > 1:2453506/1‑149 (MQ=255) gAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTAc < 1:147176/149‑1 (MQ=255) gAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTAc < 1:1203047/149‑1 (MQ=255) gTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGc < 1:1082488/149‑1 (MQ=255) tATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCg < 1:3695879/149‑1 (MQ=255) aTCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTTTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGt > 1:3374401/1‑149 (MQ=255) tCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTg > 2:3148895/1‑149 (MQ=255) tCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTg < 2:4358814/149‑1 (MQ=255) cGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGa < 2:3184610/149‑1 (MQ=255) gagagaTATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGat > 2:1104708/1‑149 (MQ=255) gagagaTATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGat > 1:3332642/1‑149 (MQ=255) gagaTATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGatat < 2:1469997/149‑1 (MQ=255) gaTATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTg < 1:2574292/149‑1 (MQ=255) atatTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCCCGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGc < 1:4097808/149‑1 (MQ=255) atatTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGc > 2:4165276/1‑149 (MQ=255) atatTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGc < 2:3507494/149‑1 (MQ=255) tatTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCg > 1:547369/1‑149 (MQ=255) tatTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCg < 1:3265716/149‑1 (MQ=255) atTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCgg < 1:472544/149‑1 (MQ=255) atTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTAATAATCATTTCAATATTATCAAAAAAGAAATTGTCACAACCCTAAATAGCGACTGTAGCGTTATCAATGACCGCTTTCATAATGAAAAACGGCGTGATATTGAgg > 1:917045/1‑149 (MQ=255) tttccTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTAAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGc < 2:4609980/146‑1 (MQ=255) ttGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGc > 2:85637/1‑149 (MQ=255) gCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCtt > 2:4436520/1‑149 (MQ=255) gCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCtt > 1:2703242/1‑149 (MQ=255) gCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCtt > 2:3544705/1‑149 (MQ=255) tttAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGa < 1:4022616/149‑1 (MQ=255) ttAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGat < 1:1902023/149‑1 (MQ=255) tAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGata < 2:1855848/149‑1 (MQ=255) aaTTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGatat < 2:120454/149‑1 (MQ=255) ttACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTa > 1:344012/1‑149 (MQ=255) aCCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACg > 2:2303769/1‑149 (MQ=255) cccATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGaa < 2:2931155/149‑1 (MQ=255) cccATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGaa < 1:2883600/149‑1 (MQ=255) ccATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAAt > 2:1335253/1‑149 (MQ=255) aGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAAAGCCCGCTTTCTTACTGAAAACCGGCGTGATATTGCGGGCTTTGATATTAAGAATAACa > 1:3617066/1‑149 (MQ=255) ccGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACaaa < 2:4091077/149‑1 (MQ=255) cGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACaaaa < 1:4759981/149‑1 (MQ=255) aTTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATg > 1:2245419/1‑149 (MQ=255) aaCATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGttt < 2:617730/149‑1 (MQ=255) aaCATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGttt > 1:4339867/1‑149 (MQ=255) aCATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTa < 2:2432998/149‑1 (MQ=255) tCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCa < 2:1223581/149‑1 (MQ=255) cccGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCAt < 2:360087/149‑1 (MQ=255) cGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCAttt > 2:2572901/1‑149 (MQ=255) cgcTATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCa > 2:3107849/1‑149 (MQ=255) gcTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCaa < 1:3850994/149‑1 (MQ=255) gcTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCaa < 2:3259523/149‑1 (MQ=255) gcTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCaa > 1:2974344/1‑149 (MQ=255) tATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACa > 1:1374484/1‑149 (MQ=255) tATTAATCATTTCAATATAATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACa > 1:3763680/1‑149 (MQ=255) tAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGt < 2:2005718/149‑1 (MQ=255) aTCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTAt < 1:671698/149‑1 (MQ=255) aTTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCaa < 1:2221712/149‑1 (MQ=255) ttCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACt > 2:1734451/1‑149 (MQ=255) aaTATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACTGcc > 1:3076853/1‑149 (MQ=255) attatCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACTGCCGAc > 1:4425553/1‑149 (MQ=255) ttatCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACTGCCGACa > 1:3174217/1‑149 (MQ=255) ttatCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAAAAAAATGTTTACCATTTTCAACATGTATCAACTGCCGACa > 1:3569996/1‑149 (MQ=255) | GAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCGGAAATTTTGCGGTATCGAGAGATATTTGCCTTTAATTACCCCATAGCCGATTAACATCCCGGCGCTATTAATCATTTCAATATTATCAATCACGAAATTGTCACAACCGTAAATAGCGACTGTCGCGTTATCAATGCCCGCTTTCTTACTGAAATCCGGCGTGATATTGCGGGCTTTGATATTACGAATAACAAAATGTTTACCATTTTCAACATGTATCAACTGCCGACAA > CP009273/2108311‑2108607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |