| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,128,696 | C→A | 7.0% | E146D (GAG→GAT) | wzc ← | colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,128,696 | 0 | C | A | 7.0% | 908.1 / 28.9 | 249 | E146D (GAG→GAT) | wzc | colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase |
| Reads supporting (aligned to +/- strand): ref base C (122/109); new base A (6/12); total (128/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGA > CP009273/2128548‑2128843 | ggCTGGCGTGAATGGCTTCTACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCTGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCAtc < 1:130163/149‑1 (MQ=255) cTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCAtctc < 2:3873385/149‑1 (MQ=255) tGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATctct < 1:432152/149‑1 (MQ=255) tGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATctct < 2:4288957/149‑1 (MQ=255) ggCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCtt < 2:4533121/149‑1 (MQ=255) ggCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGGGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCtt > 2:286507/1‑149 (MQ=255) gCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCttt > 2:3103579/1‑149 (MQ=255) gCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCttt < 2:1861098/149‑1 (MQ=255) gCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCttt < 1:223471/149‑1 (MQ=255) tGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 2:2649763/149‑1 (MQ=255) tGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg > 2:2270377/1‑149 (MQ=255) aaTGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGc > 2:4274411/1‑149 (MQ=255) aaTGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGc < 2:65935/149‑1 (MQ=255) aaTGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGc < 1:1182041/149‑1 (MQ=255) ggCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGGGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGt > 2:2462356/1‑149 (MQ=255) ggCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAACATCTGGCCCGCGTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGt < 2:633332/149‑1 (MQ=255) gCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGtt < 2:896025/149‑1 (MQ=255) gCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGtt < 1:2842758/149‑1 (MQ=255) tCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTaaa > 2:3492338/1‑149 (MQ=255) tCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTaaa > 2:1779673/1‑149 (MQ=255) cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAg > 2:4636361/1‑149 (MQ=255) aaCCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAgg > 2:3254980/1‑149 (MQ=255) aCCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggt > 2:3260433/1‑149 (MQ=255) ccATCAGCGTGACGCCTTCTTTTTTCGGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtg < 2:1104243/149‑1 (MQ=255) ccATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtg > 1:2120004/1‑149 (MQ=255) cAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCa < 1:3147688/149‑1 (MQ=255) aGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGGGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCAc > 1:2192088/1‑149 (MQ=255) gCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACt < 2:205004/149‑1 (MQ=255) gCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACt > 2:1986400/1‑149 (MQ=255) gCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACt > 1:2565559/1‑149 (MQ=255) gCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACt > 2:1123297/1‑149 (MQ=255) gTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACttt > 2:3998680/1‑149 (MQ=255) tGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTc < 1:322060/149‑1 (MQ=255) aCGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCAc < 2:3623604/149‑1 (MQ=255) aCGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCAc < 1:4467008/149‑1 (MQ=255) gCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCg > 2:488295/1‑149 (MQ=255) cttcttTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCACCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGtc < 2:4140936/149‑1 (MQ=255) tcttTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGtctc > 2:352983/1‑149 (MQ=255) cttTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCg > 2:1207577/1‑149 (MQ=255) ttttCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTc < 1:441955/149‑1 (MQ=255) cATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTc < 2:2485533/149‑1 (MQ=255) cTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCa < 2:16742/149‑1 (MQ=255) ggCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATc > 2:3366904/1‑149 (MQ=255) ggCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATc > 2:2971052/1‑149 (MQ=255) gCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCa > 1:3826547/1‑149 (MQ=255) gCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCa < 2:764487/149‑1 (MQ=255) ttGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTTTCCAGCACAATAAGCGTAAACACCAGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGAt > 1:3632009/1‑149 (MQ=255) ttGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGAt < 1:3916670/149‑1 (MQ=255) ttGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGAt < 1:1665723/149‑1 (MQ=255) ttGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGAt < 1:4053666/149‑1 (MQ=255) gCCCCCGGGCGCTACAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTCAGCGTAAACCCCTGATCCGCCATCTCTTCCGGGCGGTTAAAGGTGGTCACTTGCACCGTCTCGTTCTGACGTCCCATCAGGCGATcc < 1:2372355/149‑1 (MQ=255) gCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATcc < 1:1932017/149‑1 (MQ=255) ccccGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCa < 1:352983/149‑1 (MQ=255) cccGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCAACTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCAACAGGCGAGCCCAg > 1:4616591/1‑149 (MQ=255) ggCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCg > 1:1515521/1‑149 (MQ=255) gcgcTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGc < 1:695904/149‑1 (MQ=255) gcTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCAc < 1:4154478/149‑1 (MQ=255) cTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCAcc < 1:2055283/149‑1 (MQ=255) aaaGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGa > 2:1713949/1‑149 (MQ=255) cgccgTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATc < 1:3043371/149‑1 (MQ=255) gccgTCGCTGCTGAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAAGACCTGATCCGCCATCTCTTTCGGGCGGTTAATGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGTAAATCg < 2:3672925/149‑1 (MQ=255) gccgTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCg < 2:1653673/149‑1 (MQ=255) cGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAAc > 1:4144207/1‑149 (MQ=255) gctgctCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACg > 2:3913609/1‑149 (MQ=255) gctgctCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACg > 2:1260458/1‑149 (MQ=255) ctgctCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACgt < 1:2794483/149‑1 (MQ=255) tCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGttt < 2:4020242/149‑1 (MQ=255) tCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGttt < 1:884238/149‑1 (MQ=255) tCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGttt < 1:2688835/149‑1 (MQ=255) gTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTg > 2:3037398/1‑149 (MQ=255) ttgttgTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAat > 1:2662341/1‑149 (MQ=255) ttgttgTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAat < 2:4499193/149‑1 (MQ=255) gtCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGa > 2:299924/1‑149 (MQ=255) gtCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGAGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGa < 2:2328126/149‑1 (MQ=255) tCCAGCACATTAAGCGTAAACACCTGATCCGCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTTACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAg < 2:2195716/149‑1 (MQ=255) ccAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAgg < 1:2270377/149‑1 (MQ=255) caaaTTAAGCGTAAACACCTGATCCGCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCga < 2:793831/146‑1 (MQ=255) aTTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGAt < 1:149969/149‑1 (MQ=255) gCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTcc < 1:1791153/149‑1 (MQ=255) tAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCAcc > 2:2060117/1‑149 (MQ=255) aaCACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGt > 2:731713/1‑149 (MQ=255) cacCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGttt < 1:4627981/149‑1 (MQ=255) acCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGtttt > 1:335202/1‑149 (MQ=255) tGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTAcc > 2:2739468/1‑149 (MQ=255) aTCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGACCGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCaa > 2:3582542/1‑149 (MQ=255) aTCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCaa < 1:2971052/149‑1 (MQ=255) aTCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCaa > 2:147342/1‑149 (MQ=255) tCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAg > 1:3003994/1‑149 (MQ=255) tCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAg > 2:582238/1‑149 (MQ=255) tCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAg > 1:613293/1‑149 (MQ=255) ccGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGc < 1:697263/149‑1 (MQ=255) ccGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGc > 2:315870/1‑149 (MQ=255) gCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCAc > 1:829499/1‑149 (MQ=255) gCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCAc > 2:1297010/1‑149 (MQ=255) gCCATATCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCAc > 1:2449217/1‑149 (MQ=255) ccATCTCTTTCGGTCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGTAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCAcc < 1:2717378/149‑1 (MQ=255) ccATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCAcc > 2:2720748/1‑149 (MQ=255) cATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCa < 2:2565559/149‑1 (MQ=255) aTCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAg > 1:3644954/1‑149 (MQ=255) aTCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAg > 2:1586352/1‑149 (MQ=255) | GGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGA > CP009273/2128548‑2128843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |