| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 6.6% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 6.6% | 685.9 / 5.1 | 252 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (147/84); new base A (8/13); total (155/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 257 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170609‑2170904 | aaTAGTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGAt < 2:2497703/149‑1 (MQ=255) atagTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATc < 2:4430333/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGGAATTATTTGTTTTTAAATATCG‑AGATAACGATca < 2:3268497/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATca < 2:2523449/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATTATGAAATTATTTGTTTTTAAATTACG‑AGATAACGATccc > 2:779006/1‑147 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACaaaaa < 2:3236800/149‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACaaaaa < 1:2944400/149‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGa < 2:1180091/149‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTATATTTAAAAATATAAATTAAATATTTTTTTTTAAAAATAG‑AGATAAAGATCACaaaaaacaca > 1:1145551/1‑144 (MQ=255) acctaaTAACCGCCGCGGTGTGTTTTGTTCTGCTTGTGATTTGTCTATACCACTAACTTTTTAATTTCCTGTGTTTTTTTTTGGTTTTAAAAATATAATTAATTTTTTTTTTTTTAATTATGT‑ATATAACGATCACAAAAACGACAata < 2:4106002/144‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATATTGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATg < 2:3170409/149‑1 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATAG‑AGATAAAGATAACAAAAAAGACAAAATTaa > 2:4277163/1‑149 (MQ=255) cATAACCGCCGCGCTGTGCGGTGTTCAGCATCTGCTTTGTCGATACCCCGTACTTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACTATCACAAAAACGACAATATGaa < 2:3714319/149‑1 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTCAAAAAATAATGAAAATATTTGTTTTTATATATCG‑AGTTCACGATCACAAAAACAACACAATGaaa > 1:2644384/1‑149 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTAAAAATATAATTAAAATATTTTTTTTTTAATATAG‑AGGTAACGATAACAAAAAACACAAAATGaaa > 1:2644220/1‑149 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCG‑AGATAACTATCACAAAAACGACAATATGaaaa < 2:3569567/149‑1 (MQ=255) aCCCCCGCGCTGTGCTTTGTTCAGCATCTGCTTTGACGATCCCACGTACATTTTCATATCCTGTCTTTTTTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAatt < 2:923171/149‑1 (MQ=255) ccgccgGGATGTGCTTTTTTCAGCATCTGATTTTTATATACCACTTACTTTTTAATATCCTGTTGTTTTTTTTCTTTTACAAAATTTATTGAAATTATTTGTTTTTAAATATCT‑ATAAAACGATCAAAAAAACGACAATATGAAAatta < 2:1333494/149‑1 (MQ=255) cccccgcGCTGGGCGTTGTCCAGCATCTCCTTTGACTATACCACGTAAATTTACATACCCTGTCTTTTTTTTTCTATTAAAAAATATAATGAAATTATTTTTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAatta < 1:2740391/146‑1 (MQ=255) cgccgcGCTGTGCTTTTTTCAGAATCTGATTTGTCGATACAACTTAATTTTTAATATCGTGTCTTTTTTTTTCTTTTTCAAATTATAATTAATTTATTTTTTTTTAAATATCT‑AGATAACGAACAAAAACACGACAATATGAAAattat < 1:1492758/149‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTTTTTTAAAAAAATAATTTAAATTTTTTTTTTTTAATAAAG‑ATTTTTAGAAGACAAAAACAACAAAATGTTAattatt > 1:3710217/1‑149 (MQ=255) cTGTGGTTTGTCCAGCATCGGCTTTGTCTAAACCACTTACATTTTCATAACCTTTCTTTTTTTTTCTATTAAAAAATATAATCAAATTTTTTTTTTTTAAATATCG‑AGATAACTATCACAAAAACGACAATATGAAAATTATTCgagga < 1:4718189/149‑1 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTGAAAATATAATTTAATTATTTTTTTTTTAATATAG‑ATATAAAGATCACAAAAAAGACAAAATTGAAATTTTTAGAGGGGTg > 1:2690813/1‑149 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 2:2755352/149‑1 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAAAAAATTAAAAATTTTTTTTTTAATAAAG‑AGATAAACAAAACAAAAACCAAAAAATGAAAAATAATTGAGGCGTGGAATGCaca > 1:4585355/1‑147 (MQ=255) aGCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaa < 2:2552036/149‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCGGTCGTTTGTTTTCGTTTTAAAAATATATTGAATTTTTTTTTTTTTAATTATCG‑AGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaa < 2:4526094/149‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTAAAAAAAAAATTAAAATATTTTTTTTTTAATATAG‑AGTTAAAGATCACAAAAAAGAAAATATTAAAAATATTATATGAGTGAAAGGCaaaaaaa > 1:1080140/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTGAAAAAAAAATTAAAAAATTTTTTTTTTAATATAG‑CGAAAACCATAACAAAAACAAAAAAAATAAAAAAATTAGAGGAGGGAAAAGCacaaaaa > 1:4651389/1‑149 (MQ=255) tGTCTATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTATATTTAAAAATATAATTAAATTATTTGTTTTTAAATATCG‑AGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 2:141731/149‑1 (MQ=255) tGTCGATACCACTTACATTTTCATATCCTGTCTTTTTTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCT‑AGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 2:2660257/149‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTAAAAAAAAAAATAAATTAATTTTTTTTAAATATAG‑GGCTAAAGATAAAAAAAAAGAAAAAAATAAAATTATTATGGGGGTGAAAGGGAAAAAAACGGGCAcccc > 2:418769/1‑148 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAATATAAATTAAATATTTTTTTTTTAATATAT‑AGATAAAGAAAAAAAAAAACAAAAAAATAAAAATATTAGTGGTTTGAAAGGCAAAAAAAAGGccaacccat > 1:1564670/1‑142 (MQ=255) cACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAATATAAATAAATTATTTTTTTTTAAAAATAG‑AGATAACGATAACAAAAAAGACAAAATTAAAAATATTAGAGGAGTGTAAGGCAAAAAAAACGCCACCCGCTAgggc > 2:3787249/1‑148 (MQ=255) gTACATTTTCTTATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:173982/149‑1 (MQ=255) gTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATAAAATGAAAATATTTTTTTTTAAATATCG‑ATATAACGATAAAAAAAAAGACAATATTTAAATTATTCGATGTGTGAAATGCAAAAAAACGGCCTCCCGATAGGGaatc > 2:1998155/1‑147 (MQ=255) gTACATTTTCATATCCTGTCGTTTGTTTTGGATTTCAAAAAATTATTCAATTATTTTTTTTTTAATATAG‑AGATTAACATCACACAAAAGCCAATATGAAAATTATTAGTGGTGGGTAAGGCCAAATATCGGCCTCCCGATAGGGCAGc > 2:568202/1‑149 (MQ=255) aCATTTTCATATCCTGTCGTTTTTTTTTGATTTTAAAATATAATGAAAATATTTTTTTTTAAATATAG‑AGATAAAGATCACAAAAAACACACTATTAAAATTTTTAGAGGGGTGTAATGCAAAAAAAATGCCGCCCCATATGGCAGccc > 2:1316994/1‑148 (MQ=255) tttttCATATCCTTTCTTTTGTTTTATATTAAAAAATAAAATCAATTTATTTTTTTTTAAATATCT‑ATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:3486001/148‑1 (MQ=255) ttattatCCTGTCTTTTGTTTTCTTTTTAAAAATATAATGAATTTATTTGTTTTTAATTATCG‑AGATAACTAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCa < 1:394420/145‑1 (MQ=255) tCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGCGCgtg > 2:2991625/1‑149 (MQ=255) cGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCG‑AGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:1587178/149‑1 (MQ=255) ttttgtttTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 2:532666/148‑1 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:2299961/1‑149 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:95971/1‑149 (MQ=255) ttgtttTCGATTTCAAAATATAATTAAATTTTTTGTTTTTAAATATCG‑ATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:3303786/149‑1 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc > 1:3188622/1‑149 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGACAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCTAAGTGCGCGTGTTTTTATGCCg > 2:3394787/1‑149 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGACAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 1:2937838/1‑149 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:1108775/1‑149 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 1:3821961/1‑149 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:3391300/1‑149 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:4041559/1‑149 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:1647916/1‑149 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:844285/1‑149 (MQ=255) acAAAATATATTTAAATTATTTTTTTTTAAATATCG‑ATATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGTCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTCCGCGTGTTTTTATGCCGGATGc < 1:3448672/148‑1 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:201921/149‑1 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCT‑AGATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCGCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 2:1940112/149‑1 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:4242969/1‑149 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:2287908/1‑149 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:501509/1‑149 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:3523028/1‑149 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAGAATTAGTCGAGGAGTGAAAGGCAAAAATACGGCCTCGCGATAGGGACGCCGTAGCACAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:2618558/1‑149 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:1437144/1‑149 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:837092/1‑149 (MQ=255) ataATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:1887865/1‑149 (MQ=255) aTGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:2308819/1‑149 (MQ=255) aTGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa < 2:182572/149‑1 (MQ=255) tGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:179808/1‑149 (MQ=255) taattttttttttttTAAATATCT‑ACATACCGAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:4007043/142‑1 (MQ=255) taattttttttttttTAAATATCG‑AGATACCGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:2238320/142‑1 (MQ=255) taaaTTTTTTTTTTTTTAATTTTGTATATAACTATCACAAAAACGACAATATTAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 1:109527/148‑1 (MQ=255) attttttttttttTAATTATCT‑ATAAAACGAAAACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 1:1250580/144‑1 (MQ=255) aaTTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2331760/1‑149 (MQ=255) aaTTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2978149/1‑149 (MQ=255) ttattTGTTTTTAAATATCG‑ATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg < 2:1043749/149‑1 (MQ=255) ttattTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 2:2139247/1‑149 (MQ=255) tattTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg > 2:305134/1‑149 (MQ=255) tttGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 2:2748856/1‑149 (MQ=255) tttGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:4068536/1‑149 (MQ=255) tttGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 2:3507144/1‑149 (MQ=255) tttGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:778060/1‑149 (MQ=255) ttGTTTTTAAATATCT‑ATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg < 2:3282278/149‑1 (MQ=255) gTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg > 1:670460/1‑149 (MQ=255) ttttAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 2:3171664/1‑149 (MQ=255) ttttAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATCCGTGGCAGTGCt > 2:3535662/1‑149 (MQ=255) aaTATCT‑ATAAAACCAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 1:3261530/149‑1 (MQ=255) aaTATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 1:2862556/1‑149 (MQ=255) aaTATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:900648/149‑1 (MQ=255) aaTATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 1:4394197/1‑149 (MQ=255) tatCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:1166834/1‑149 (MQ=255) tCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:4230961/1‑149 (MQ=255) tCG‑AGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa < 1:2165260/149‑1 (MQ=255) g‑agaTAACGATCACCAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 2:4651389/149‑1 (MQ=255) agaTAACCATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa < 2:2871233/149‑1 (MQ=255) tAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 1:4272075/149‑1 (MQ=255) tAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa > 1:2404499/1‑149 (MQ=255) aCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:1956033/1‑149 (MQ=255) aCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 2:563809/1‑149 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:3315801/1‑149 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCG‑AGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170609‑2170904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |