| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,376,959 | C→T | 89.2% | N256N (AAC→AAT) | elaD → | protease, capable of cleaving an AMC‑ubiquitin model substrate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,376,959 | 0 | C | T | 89.2% | 898.8 / 87.0 | 305 | N256N (AAC→AAT) | elaD | protease, capable of cleaving an AMC‑ubiquitin model substrate |
| Reads supporting (aligned to +/- strand): ref base C (16/17); new base T (149/123); total (165/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
AATGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGATC > CP009273/2376813‑2377104 | aTGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATattcaattca > 1:4349813/1‑149 (MQ=255) tGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCAt > 2:2383434/1‑149 (MQ=255) tGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAAGACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAACAAAATAATAAACTACAAATAAACTGCGTCATATTCAATTCAt < 2:121010/149‑1 (MQ=255) ttAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCa > 2:2451568/1‑149 (MQ=255) ttAAGAGCGATCCATCATGGCCGAATGAACTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATAATAGTTTCGCTACAGAAAATAGTAAAT‑ACAAAAAATAATAAACAACAAATAAAATGCGTCATAATCAATTCATTGCGTGCa > 1:72574/1‑149 (MQ=255) gagCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAg > 2:3030186/1‑149 (MQ=255) gCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATTAGTCATATTCAACTCATTGCGTGCACTAGGc > 2:3691967/1‑149 (MQ=255) gCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGc < 1:1178953/149‑1 (MQ=255) aTCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTAt < 1:943888/149‑1 (MQ=255) catcatGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGAt < 2:4006819/149‑1 (MQ=255) atcatGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATa > 1:3466228/1‑149 (MQ=255) atcatGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATa < 1:2256761/149‑1 (MQ=255) atcatGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATa > 1:1265387/1‑149 (MQ=255) tcatGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATaa < 2:274448/149‑1 (MQ=255) atGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAg < 1:3775792/149‑1 (MQ=255) tGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAAATACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGa > 2:3591389/1‑149 (MQ=255) gCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGaaa > 1:2590838/1‑149 (MQ=255) gCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGaaa < 1:4151177/149‑1 (MQ=255) ccGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGaaaa < 2:4114318/149‑1 (MQ=255) cGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTCGGCTATGATAAAGAAAAt > 1:3222294/1‑149 (MQ=255) cGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAAt < 1:3706794/149‑1 (MQ=255) cGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAAt > 2:3254215/1‑149 (MQ=255) gAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAAtt > 2:1544475/1‑149 (MQ=255) aaTGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTc > 1:4324442/1‑149 (MQ=255) aTGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCa > 2:788438/1‑149 (MQ=255) tGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCAc > 2:4545883/1‑149 (MQ=255) gTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTaa < 1:188072/149‑1 (MQ=255) gTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTaa < 2:931448/149‑1 (MQ=255) gTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTaa > 2:671031/1‑149 (MQ=255) ccAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGc < 2:2046597/149‑1 (MQ=255) ttATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCgtgt < 1:1834717/149‑1 (MQ=255) tATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTc < 2:3387716/149‑1 (MQ=255) aTTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATTTTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCa > 2:2635252/1‑149 (MQ=255) tCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCAtt > 2:583339/1‑149 (MQ=255) ccATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAAt > 2:3867302/1‑149 (MQ=255) cATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATa > 1:2895446/1‑149 (MQ=255) cATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATa > 1:4602480/1‑149 (MQ=255) cATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATa > 2:2264069/1‑149 (MQ=255) aTAAAGACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAg < 2:3496182/149‑1 (MQ=255) aaaTACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGtt > 2:4448968/1‑149 (MQ=255) cTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAAt < 2:4373091/149‑1 (MQ=255) tGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAAtt < 2:2513516/149‑1 (MQ=255) ggCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTc < 1:3929716/149‑1 (MQ=255) ggCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTc < 2:1965024/149‑1 (MQ=255) gCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCt < 2:72659/149‑1 (MQ=255) ggACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGa > 1:1809862/1‑149 (MQ=255) gACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGaa > 1:4032581/1‑149 (MQ=255) gACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGaa < 2:760226/149‑1 (MQ=255) acacTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAAc < 2:4488347/149‑1 (MQ=255) cacTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACt > 1:1039129/1‑149 (MQ=255) acTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTc > 2:1419475/1‑149 (MQ=255) acTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTc > 1:2491459/1‑149 (MQ=255) cTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCa < 2:536813/149‑1 (MQ=255) tGGATATTAGTTTCGCTACAGAAAATAGTAAATAAAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCa < 1:1325164/149‑1 (MQ=255) ggATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAAAAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATg > 1:1537060/1‑149 (MQ=255) tttCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATg < 1:4435284/149‑1 (MQ=255) ttCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGt > 1:3069671/1‑149 (MQ=255) cTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGaa < 2:1322647/149‑1 (MQ=255) tACAGAAAATAGTAAAT‑AAAAAAAATAATAACCTCCAAATAATATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGTAAATTCACTTATGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGATATGTCGaat < 1:1944187/149‑1 (MQ=255) tACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAATAAAATTCAATTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGaat > 2:4666781/1‑149 (MQ=255) tACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCAGTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGaat < 1:2078694/149‑1 (MQ=255) cAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGaataa < 1:4675666/149‑1 (MQ=255) aaaTAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGaatcataat > 2:3150041/1‑149 (MQ=255) aaTAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAataataata > 2:2998003/1‑149 (MQ=255) aaTAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAataataata > 1:1417376/1‑149 (MQ=255) aTAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAatat > 2:4464835/1‑149 (MQ=255) tAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAAATCATGGGAGAAATGTCGAATAATAAtata > 1:2744113/1‑149 (MQ=255) aGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAGTGTCGAGTAATAATATaa > 2:3140846/1‑149 (MQ=255) taaat‑aaaAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATaaaa > 1:239627/1‑149 (MQ=255) aat‑aaaAAAAATAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGt > 1:2382341/1‑149 (MQ=255) aat‑aaaAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGt > 2:357844/1‑149 (MQ=255) aataaaaaaaTAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGtt < 1:2142847/146‑1 (MQ=255) aaaaaaaTAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCAt > 1:1138089/1‑149 (MQ=255) aaaaaTAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCAttt > 1:1511/1‑149 (MQ=255) aaaTAATAAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTaa > 1:2456047/1‑149 (MQ=255) ataataAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTCTGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTGAAAt > 2:3258187/1‑149 (MQ=255) ataataAACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAAt < 1:906947/149‑1 (MQ=255) ataataAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAAt < 1:1709028/149‑1 (MQ=255) taataaACTACCAATAAACTGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATg < 2:4640685/149‑1 (MQ=255) taataaACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATg > 2:170222/1‑149 (MQ=255) aataaACTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGa > 2:614057/1‑149 (MQ=255) aaCTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGGAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCa > 1:522865/1‑149 (MQ=255) aaCTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCa > 1:57403/1‑149 (MQ=255) aaCTACAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCa > 1:4134252/1‑149 (MQ=255) tACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACGAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCagag < 2:4739220/149‑1 (MQ=255) cAAATAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGat > 2:4255776/1‑149 (MQ=255) aaaTAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGata > 2:1874150/1‑149 (MQ=255) aaTAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGataa < 2:2590838/149‑1 (MQ=255) aTAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGataat < 2:2812007/149‑1 (MQ=255) aTAAAATGCGTCATATTCAATTCATTGCGTGCACTAGGCGAAGATAAAGAAAATTCACTTAACCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGTATAATAAAATAAAAGTTCATTTAAATGAACCAGAGagaat < 2:244863/149‑1 (MQ=255) aaaaTGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCCGAGATAatat > 1:3541144/1‑149 (MQ=255) aaaaTGCGTCATATTCAATTCAGTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAatat < 1:2835817/149‑1 (MQ=255) aaaTGCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATAtt > 2:2158418/1‑149 (MQ=255) gCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTa > 2:3603069/1‑149 (MQ=255) gCGTCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTa > 1:2985840/1‑149 (MQ=255) tCATATTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACAt < 1:335203/149‑1 (MQ=255) atatTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGc > 1:854097/1‑149 (MQ=255) atatTCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAAAATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGc > 1:689263/1‑149 (MQ=255) ttCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGa < 2:4765253/149‑1 (MQ=255) ttCAATTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGa > 2:341735/1‑149 (MQ=255) | AATGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAAT‑AAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGATC > CP009273/2376813‑2377104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |