| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,501,358 | G→T | 5.4% | R6S (CGC→AGC) | fryC ← | putative enzyme IIC component of PTS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,501,358 | 0 | G | T | 5.4% | 1211.1 / 25.4 | 313 | R6S (CGC→AGC) | fryC | putative enzyme IIC component of PTS |
| Reads supporting (aligned to +/- strand): ref base G (120/176); new base T (7/10); total (127/186) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 317 total aligned reads displayed.
ACACCGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGAAACGTTCG > CP009273/2501210‑2501506 | acacCGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCg > 2:2999750/1‑149 (MQ=255) cacCGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGt < 2:3513410/149‑1 (MQ=255) ccGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCtttt < 1:2656598/149‑1 (MQ=255) ccGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGttt < 2:3815958/149‑1 (MQ=255) gCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGttttt > 1:2478391/1‑149 (MQ=255) cccATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCTtttttt > 2:4779712/1‑149 (MQ=255) ccATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTa > 2:1963215/1‑149 (MQ=255) cATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTaa < 1:79919/149‑1 (MQ=255) cATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTaa < 1:2230899/149‑1 (MQ=255) tAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATg < 1:1237242/149‑1 (MQ=255) aaTTAAGGTCGGCACCATGCGAGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATgg > 2:2123057/1‑149 (MQ=255) aTTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGc > 1:253384/1‑149 (MQ=255) ttAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGcc < 1:880298/149‑1 (MQ=255) ttAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGcc < 1:3546/149‑1 (MQ=255) tAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCa > 1:3978467/1‑149 (MQ=255) aaGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCAt > 1:2492334/1‑149 (MQ=255) gTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAAc < 1:4212778/149‑1 (MQ=255) ggCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAAt < 2:229351/149‑1 (MQ=255) ggCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAAt < 2:3716574/149‑1 (MQ=255) aCCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTAt > 1:4572540/1‑149 (MQ=255) aCCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTAt < 2:340199/149‑1 (MQ=255) aTGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATccc < 2:3963523/149‑1 (MQ=255) aTGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATccc > 2:441432/1‑149 (MQ=255) gCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTg < 1:4779881/149‑1 (MQ=255) gTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTc < 1:4729674/149‑1 (MQ=255) gTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTc > 2:3224109/1‑149 (MQ=255) tGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCg > 1:2383314/1‑149 (MQ=255) tGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCg > 2:3664823/1‑149 (MQ=255) tGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGGTGCACTGCGATGGTTAAAGGCCATAACAATAATCCCTGTCg > 2:4188683/1‑149 (MQ=255) aaTCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAat < 1:1178424/149‑1 (MQ=255) tCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAatat > 2:3095177/1‑149 (MQ=255) ccTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTa < 2:1177242/149‑1 (MQ=255) ccTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTa < 2:2520670/149‑1 (MQ=255) ccTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTa < 2:456471/149‑1 (MQ=255) tGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACt < 1:108047/149‑1 (MQ=255) cATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACtgtt < 1:1323641/149‑1 (MQ=255) cATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACtgtt < 2:2057118/149‑1 (MQ=255) tCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACtgttgt < 1:716950/149‑1 (MQ=255) tCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACtgttgt > 1:2194158/1‑149 (MQ=255) tCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACtgttgt < 2:1313838/149‑1 (MQ=255) cacaTGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTgttgtt > 1:4135920/1‑149 (MQ=255) gctgcGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCagag < 1:2001749/149‑1 (MQ=255) gcGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCTTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCa < 2:1687778/149‑1 (MQ=255) gggAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAat < 1:4268383/149‑1 (MQ=255) ggAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAatc > 1:358630/1‑149 (MQ=255) gTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAatcatc < 1:3756384/149‑1 (MQ=255) gTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAatcatc > 1:3438029/1‑149 (MQ=255) ttCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCAtct > 1:4486548/1‑149 (MQ=255) ccAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGa > 1:3220378/1‑149 (MQ=255) cAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCTTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGAt < 2:4359212/149‑1 (MQ=255) cTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCGGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCttt < 2:1527594/149‑1 (MQ=255) ggTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTTATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTtga < 1:1820850/149‑1 (MQ=255) ggTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTtga < 1:626552/149‑1 (MQ=255) agagGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGc > 2:1039509/1‑149 (MQ=255) agagGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGc < 1:3410790/149‑1 (MQ=255) agagGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGc < 1:3015605/149‑1 (MQ=255) ttCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGttttt < 2:3790598/149‑1 (MQ=255) tCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATTATGCCCGCAGCGTTTTTa > 1:384910/1‑149 (MQ=255) cTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTaa < 2:198915/149‑1 (MQ=255) cTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTaa > 1:4758907/1‑149 (MQ=255) ttAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAAt < 2:3148714/149‑1 (MQ=255) ttAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAAt > 1:3666090/1‑149 (MQ=255) tAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAAtt < 1:2876277/149‑1 (MQ=255) ctgccgctgccgCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCg < 1:4034808/149‑1 (MQ=255) cgctgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCt < 1:2746761/149‑1 (MQ=255) cgctgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCt < 1:1507182/149‑1 (MQ=255) cgctgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCAGAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCt < 1:2085969/149‑1 (MQ=255) ctgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGc < 1:934717/149‑1 (MQ=255) ctgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGc < 1:3324394/149‑1 (MQ=255) tgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCTTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCa > 2:1513908/1‑149 (MQ=255) tgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCa < 1:3963314/149‑1 (MQ=255) tgccgcACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCa > 2:2380637/1‑149 (MQ=255) cACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTg < 1:2636905/149‑1 (MQ=255) cACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTg > 1:2817386/1‑149 (MQ=255) cACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTg > 2:1075740/1‑149 (MQ=255) cGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGAtt < 2:4052995/149‑1 (MQ=255) cGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGAtt > 2:2231006/1‑149 (MQ=255) cGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGAtt < 1:2058719/149‑1 (MQ=255) ggATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGAttt > 2:1697002/1‑149 (MQ=255) gATGCGCCAGGCACAACGGTTGCACTGCTTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTc > 2:2725576/1‑149 (MQ=255) gATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTc < 2:1598870/149‑1 (MQ=255) gATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTc > 2:664221/1‑149 (MQ=255) aTGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCa < 1:2999750/149‑1 (MQ=255) tGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCAt < 1:3210972/149‑1 (MQ=255) cgcCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATaa < 2:2606732/149‑1 (MQ=255) gcCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATaaa > 1:2619504/1‑149 (MQ=255) cAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATTATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACg < 1:423711/149‑1 (MQ=255) aGGCACAACGGTTGCACTGCTTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGt < 1:524918/149‑1 (MQ=255) aGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGt < 1:1450117/149‑1 (MQ=255) ggCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTc > 2:4458319/1‑149 (MQ=255) ggCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTc > 1:1249412/1‑149 (MQ=255) cGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTTCTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGAt < 1:3183929/149‑1 (MQ=255) gggtGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGAtt < 2:2596490/146‑1 (MQ=255) gTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTc > 2:3048062/1‑149 (MQ=255) ttGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCg > 1:3513039/1‑149 (MQ=255) tGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATCTGACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGa < 2:765689/149‑1 (MQ=255) cACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGaaa < 1:1023492/149‑1 (MQ=255) aCTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGAAAc > 1:4331747/1‑149 (MQ=255) cTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGAAAcg > 2:4498305/1‑149 (MQ=255) gCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGAAAcgtt < 1:1691580/149‑1 (MQ=255) | ACACCGCCCATAATTAAGGTCGGCACCATGCGTGAAATCCCTGACATCACATGCTGCGGGAGTTCACCCCAGAAGCTGGTTTTAGAGGCCTGCGGATTCTTAACTGCCGCTGCCGCACCGGATGCGCCAGGCACAACGGTTGCACTGCGTTTTTTAATGGCCATAACAATTATCCCTGTCGAATATTACTGTTGTTCAGAGGCAATCATCTCTTCGATTTCTTTGATGATGCCCGCAGCGTTTTTAATTGCGTCCTGCAAAGTGATTTCATAAACGTCGCGTGATTCGAAACGTTCG > CP009273/2501210‑2501506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |