| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,532,553 | C→A | 9.9% | A130A (GCG→GCT) | cysM ← | cysteine synthase B (O‑acetylserine sulfhydrolase B) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,532,553 | 0 | C | A | 9.9% | 969.6 / 52.8 | 273 | A130A (GCG→GCT) | cysM | cysteine synthase B (O‑acetylserine sulfhydrolase B) |
| Reads supporting (aligned to +/- strand): ref base C (149/97); new base A (16/11); total (165/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
Only 100 of 276 total aligned reads displayed.
TGATAGTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGCCTTTCAGCG > CP009273/2532405‑2532701 | tGATAGTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTc < 1:806139/149‑1 (MQ=255) gATAGTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCg > 2:1312660/1‑149 (MQ=255) aGTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGAGTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCa > 1:1872916/1‑149 (MQ=255) gTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCAt > 2:3834254/1‑149 (MQ=255) tGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCAtc > 1:2855378/1‑149 (MQ=255) ggTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCa < 2:1653603/149‑1 (MQ=255) gtcgtcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAg < 1:4253310/149‑1 (MQ=255) tcgtcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAgc > 1:1199765/1‑149 (MQ=255) gtcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAgcgc > 2:3351804/1‑149 (MQ=255) gtcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAgcgc > 2:4222803/1‑149 (MQ=255) tcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGcc > 2:405345/1‑149 (MQ=255) tcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGcc > 2:2431811/1‑149 (MQ=255) tcCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGcc > 2:3104724/1‑149 (MQ=255) ccccATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCa > 1:3846667/1‑149 (MQ=255) cccATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAg > 1:2764958/1‑149 (MQ=255) cTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATcgcg < 2:32284/149‑1 (MQ=255) tGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATcgcgc < 1:2225174/149‑1 (MQ=255) agaCAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCa > 1:647409/1‑149 (MQ=255) agaCAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCa < 1:2722951/149‑1 (MQ=255) gaCAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCAc > 2:318469/1‑149 (MQ=255) cAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCt > 1:3898936/1‑149 (MQ=255) aaaaTGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCtt > 1:3378401/1‑149 (MQ=255) aaaaTGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCtt > 1:202909/1‑149 (MQ=255) aaTGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTcc < 2:4156714/149‑1 (MQ=255) gATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCt > 1:336615/1‑149 (MQ=255) gcgcCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGct < 1:2251019/149‑1 (MQ=255) cccgccGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCtt < 2:1356465/149‑1 (MQ=255) ccgccgGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCttt > 2:3049612/1‑149 (MQ=255) gccgGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTgg < 2:1497580/149‑1 (MQ=255) cgGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTg > 2:4137582/1‑149 (MQ=255) tttGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACa > 1:1379425/1‑149 (MQ=255) ctgcCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGaa < 1:3710966/149‑1 (MQ=255) gcCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATc < 2:4351002/149‑1 (MQ=255) ccAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCa > 2:2092432/1‑149 (MQ=255) aGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGt > 2:603571/1‑149 (MQ=255) aGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGt > 1:4509466/1‑149 (MQ=255) aGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGt > 2:1907427/1‑149 (MQ=255) aGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGt > 1:2292401/1‑149 (MQ=255) aTTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTc < 1:4283727/149‑1 (MQ=255) tttCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTcc > 2:2119786/1‑149 (MQ=255) ggCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCAcc < 1:2262020/149‑1 (MQ=255) gCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCa > 2:2250529/1‑149 (MQ=255) ccAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATa > 1:1669597/1‑149 (MQ=255) gtggtggtgTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGc < 2:524952/149‑1 (MQ=255) tggtggtgTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCACCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCa > 2:3716349/1‑149 (MQ=255) ggtgTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCa > 1:196194/1‑149 (MQ=255) ggtgTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCa < 1:3464591/149‑1 (MQ=255) gtgtAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCAt < 2:2788050/149‑1 (MQ=255) tgtAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATc < 2:4225989/149‑1 (MQ=255) tAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgc < 2:1039592/149‑1 (MQ=255) tAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgc > 2:608231/1‑149 (MQ=255) aaTGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgcc > 1:4712896/1‑149 (MQ=255) aTGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgccg > 1:967859/1‑149 (MQ=255) aTGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgccg > 2:475525/1‑149 (MQ=255) aTGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgccg > 1:3326426/1‑149 (MQ=255) tGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATcgccgc > 1:4439166/1‑149 (MQ=255) cgcATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCAc < 2:3895728/149‑1 (MQ=255) tAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCg > 2:4395243/1‑149 (MQ=255) aaGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGt < 2:2959628/149‑1 (MQ=255) aaGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGt > 1:2517344/1‑149 (MQ=255) gggTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGtta > 2:126939/1‑148 (MQ=255) gggTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTc > 2:1843614/1‑149 (MQ=255) ggTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTcc < 1:71707/149‑1 (MQ=255) ggTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTcc < 1:1005159/149‑1 (MQ=255) ttATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTg < 2:333875/149‑1 (MQ=255) tATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCCTGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTgg < 2:1561637/149‑1 (MQ=255) tATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTgg > 2:4516009/1‑149 (MQ=255) aTCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGc > 2:25113/1‑149 (MQ=255) tCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGATCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCt > 1:3980008/1‑149 (MQ=255) ggATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCAt > 1:2945987/1‑149 (MQ=255) ggATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCAt > 2:645887/1‑149 (MQ=255) ttattGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCAtgtt < 1:2103586/149‑1 (MQ=255) attGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCAtgttgt > 2:3422435/1‑149 (MQ=255) attGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCAtgttgt < 2:749745/149‑1 (MQ=255) aaCTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCggg > 2:2950648/1‑149 (MQ=255) aaCTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCggg > 1:1495370/1‑149 (MQ=255) cTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCa < 1:3128451/149‑1 (MQ=255) tGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCAt > 2:2886488/1‑149 (MQ=255) gATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATc > 1:3920904/1‑149 (MQ=255) aTCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCa < 1:4383399/149‑1 (MQ=255) tCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAg > 2:2697035/1‑149 (MQ=255) tCGAGCAGCTTTCCTTCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAg > 1:3490058/1‑149 (MQ=255) cGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGc < 1:510065/149‑1 (MQ=255) gAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCa < 2:2418885/149‑1 (MQ=255) agcagcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATTCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCaa < 2:2747559/149‑1 (MQ=255) gcagcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAAt > 2:4458861/1‑149 (MQ=255) gcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTc > 2:3581069/1‑149 (MQ=255) gcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTc < 2:2781480/149‑1 (MQ=255) gcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTc > 2:2544757/1‑149 (MQ=255) gcTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTc < 2:1753469/149‑1 (MQ=255) cTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCa > 1:4182621/1‑149 (MQ=255) ccTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCg < 1:2423512/149‑1 (MQ=255) cTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGa < 1:2124335/149‑1 (MQ=255) tCGCCACGATTAGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATa < 1:1006511/149‑1 (MQ=255) gCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGc < 1:1859467/149‑1 (MQ=255) ccACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGcc < 1:160707/149‑1 (MQ=255) ccACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGcc < 2:885058/149‑1 (MQ=255) aCGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGCCtt < 2:2338653/149‑1 (MQ=255) aCGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGCCtt < 1:1801668/149‑1 (MQ=255) aTTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGCCTTTCa > 1:3280406/1‑149 (MQ=255) | TGATAGTGCCGGTCGTCCCCATGCTGGAGACAAAATGAGTGATGCGCCCGCCGGTTTGCTGCCAGATTTCCGGCCCAGTGGTGGTGTAATGCGCATAAGGGTTATCGGGATTATTGAACTGATCGAGCAGCTTTCCTTCGCCACGATTCGCCATCTCCAGCGCCAGATCGCGCGCACCTTCCATGCCCTGCTCTTTGGTGACAAGAATCAGTTCCGCACCATAAGCACGCATCGCCGCACGGCGTTCCTGGCTCATGTTGTCGGGCATCAGCAATTTCATGCGATAGCCTTTCAGCG > CP009273/2532405‑2532701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |