| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,577,402 | C→A | 7.9% | V495F (GTC→TTC) | aegA ← | putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,577,402 | 0 | C | A | 7.9% | 1161.8 / 43.1 | 324 | V495F (GTC→TTC) | aegA | putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (160/136); new base A (15/12); total (176/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 327 total aligned reads displayed.
GAATCCCGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATG > CP009273/2577255‑2577550 | gAATCCCGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACg < 1:1512195/149‑1 (MQ=255) aaTCCCGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGt > 2:662407/1‑149 (MQ=255) aaTCCCGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTAATCACGACGATAAGCGCAGGTGACGt > 1:913582/1‑149 (MQ=255) cccGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTAc < 2:2207836/149‑1 (MQ=255) ccGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACt < 2:3554517/149‑1 (MQ=255) cAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTcgc < 2:4525794/149‑1 (MQ=255) gACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCgcgc > 2:369838/1‑149 (MQ=255) gTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGt > 1:71941/1‑149 (MQ=255) gACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTgg > 2:4479051/1‑149 (MQ=255) ttGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTGGTGACTTCTTTGTTCGAGCCTGGCAGGTTAGCTTCGTCACGACGTTGAGGGCAGGTGCCGTGACTGGCGCCgggggggc > 1:2402966/1‑145 (MQ=255) ttGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCa < 2:939248/149‑1 (MQ=255) ttGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGAAGTTACTCGCGCCGTGGCGCa < 2:1762208/149‑1 (MQ=255) gTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGt > 1:565881/1‑149 (MQ=255) ttcattcaGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTg > 2:1058147/1‑149 (MQ=255) cattcaGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCg > 1:4333581/1‑149 (MQ=255) cattcaGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCg > 1:4176883/1‑149 (MQ=255) attcaGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTGTTGACGTATTTATTAGGGCCTGGCAGTTTATCTTAAAAACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCgg > 1:2019067/1‑149 (MQ=255) gCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGGTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGc > 1:3794465/1‑149 (MQ=255) tCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGcac < 1:260822/149‑1 (MQ=255) aGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGcacaca > 2:2885401/1‑149 (MQ=255) aGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGcacaca > 2:493434/1‑149 (MQ=255) aGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGcacaca > 1:3744242/1‑149 (MQ=255) gcgcCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAg < 1:157574/149‑1 (MQ=255) gcCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGGGGCGCAGTGCGGTACGCACACAGTc > 1:660633/1‑149 (MQ=255) ccACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTcc < 2:3912259/149‑1 (MQ=255) cACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGAAGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCa < 2:3644481/149‑1 (MQ=255) ggCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGAAGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATcgc < 1:4706899/149‑1 (MQ=255) gCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATcgcg < 1:3276864/149‑1 (MQ=255) gCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATcgcg < 1:4479598/149‑1 (MQ=255) gCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATcgcg > 2:866711/1‑149 (MQ=255) cTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCgg < 2:2448972/149‑1 (MQ=255) tGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGgt > 2:3985410/1‑149 (MQ=255) tGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTGAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGgt < 2:1895268/149‑1 (MQ=255) ggACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGgtg > 2:4741405/1‑149 (MQ=255) ggACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGgtg > 2:4332380/1‑149 (MQ=255) gACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGgtgt < 2:1149402/149‑1 (MQ=255) aCGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTAATCGCGCCGTGGCGCCGTGCGGTACGCACACAGTCCATAGCGGTGTc > 1:9708/1‑149 (MQ=255) gTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgc < 2:4663939/149‑1 (MQ=255) gTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgc > 2:3845698/1‑149 (MQ=255) gTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgc < 2:4284098/149‑1 (MQ=255) gTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgc < 1:1280836/149‑1 (MQ=255) aaaTTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgccgc < 2:1204848/149‑1 (MQ=255) ttCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCCTGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTcgccgccgc > 1:3939978/1‑149 (MQ=255) tCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCgccgccgcc < 1:1526406/149‑1 (MQ=255) tCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCgccgccgcc < 2:647384/149‑1 (MQ=255) ggCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCa > 2:2646600/1‑149 (MQ=255) gCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCCTCGCGGTGTCGCCGCCGCCCAGTACCac > 2:1394864/1‑149 (MQ=255) gCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCac > 2:692154/1‑149 (MQ=255) gCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCac < 1:3842567/149‑1 (MQ=255) cccccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacg > 1:312681/1‑149 (MQ=255) ccccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacga < 1:1620118/149‑1 (MQ=255) ccccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacga < 1:1132958/149‑1 (MQ=255) cccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacgac < 1:348017/149‑1 (MQ=255) cccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGAAGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacgac < 2:3312883/149‑1 (MQ=255) cccTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGAAGTTACACGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCacgac > 1:176407/1‑149 (MQ=255) ctctTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGt < 2:3261858/149‑1 (MQ=255) tctTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGtt > 1:3114660/1‑149 (MQ=255) ctTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTa > 2:4038869/1‑149 (MQ=255) gggCGTTCTTCACTTCTTTATTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCcg > 2:3080392/1‑149 (MQ=255) ttcttcACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGt < 2:3448574/149‑1 (MQ=255) tcttcACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCTCCCAGTACCACGACGTTAAGTCCGGCGGTa < 1:2836873/149‑1 (MQ=255) cttcACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTAt < 2:3319739/149‑1 (MQ=255) tcACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTg > 1:3623861/1‑149 (MQ=255) tcACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCACCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTg > 1:4135201/1‑149 (MQ=255) cACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGa < 1:768674/149‑1 (MQ=255) cACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGa > 2:2109703/1‑149 (MQ=255) cACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGa > 2:1094326/1‑149 (MQ=255) aCTTCTTTCTTCGAGCCTGGCATGTTCGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGAt < 1:4685015/149‑1 (MQ=255) ctttcttCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAAc > 2:2084775/1‑149 (MQ=255) ctttcttCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAAc > 1:946219/1‑149 (MQ=255) ctttcttCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGGATTGATAAAc > 1:3334439/1‑149 (MQ=255) tcttcGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGc > 2:3176822/1‑149 (MQ=255) tcttcGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGc > 2:91724/1‑149 (MQ=255) tcGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCTGTGCGGTACGCACACCGTCCATCGGGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCTGGCGGTATTGATAAACGGctct < 1:2520166/149‑1 (MQ=255) cGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCtt < 2:2945155/149‑1 (MQ=255) cGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCtt < 2:4748736/149‑1 (MQ=255) aGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTcc > 2:154782/1‑149 (MQ=255) gCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGc > 2:2773983/1‑149 (MQ=255) gCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGc > 2:2774325/1‑149 (MQ=255) gCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGc < 2:1078965/149‑1 (MQ=255) tGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGctct > 2:425879/1‑149 (MQ=255) gTTAGCTTCATCCCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCtt < 2:1704602/149‑1 (MQ=255) ttAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTc > 2:3556627/1‑149 (MQ=255) ttAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTc > 2:3365952/1‑149 (MQ=255) aGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGa > 1:3427271/1‑149 (MQ=255) tcatcaCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGccc < 2:1315631/149‑1 (MQ=255) catcaCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGcccc > 2:590668/1‑149 (MQ=255) atcaCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCa > 1:2146406/1‑149 (MQ=255) tcaCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCAt < 1:229908/149‑1 (MQ=255) caCGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATc < 2:2284102/149‑1 (MQ=255) acgacgATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCa < 1:3985410/149‑1 (MQ=255) gaTAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGt > 1:1081994/1‑149 (MQ=255) aTAAGCGCTGGTGAAGTTACTCGCGCCGTGGCGCTGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACTTTAAGTCCGGCGGTTTTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGtt < 1:3254088/149‑1 (MQ=255) aTAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGtt < 2:4187168/149‑1 (MQ=255) aTAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGtt < 2:1797580/149‑1 (MQ=255) tAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCACCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGttt < 2:4135201/149‑1 (MQ=255) aaGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTa > 1:2521195/1‑149 (MQ=255) ctggTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACTGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACTTTAAGTCCGGCGGTTTTTATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGtt < 1:2810517/147‑1 (MQ=255) aGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTg > 1:2250211/1‑149 (MQ=255) ggTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTgg > 1:1014401/1‑149 (MQ=255) | GAATCCCGCAGACGTGACCTTGTTCATTCAGCTCAAGCGCCACCGGCTGGACGTTAAATTCGAAGTTGGCCCCCTCTTCGCGGGCGTTCTTCACTTCTTTCTTCGAGCCTGGCATGTTAGCTTCATCACGACGATAAGCGCAGGTGACGTTACTCGCGCCGTGGCGCAGTGCGGTACGCACACAGTCCATCGCGGTGTCGCCGCCGCCCAGTACCACGACGTTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATG > CP009273/2577255‑2577550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |