| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,706,124 | G→T | 7.9% | intergenic (‑1/‑131) | trmN ← / → srmB | tRNA1(Val) (adenine(37)‑N6)‑methyltransferase/ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,706,124 | 0 | G | T | 7.9% | 776.1 / 7.1 | 269 | intergenic (‑1/‑131) | trmN/srmB | tRNA1(Val) (adenine(37)‑N6)‑methyltransferase/ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base G (119/111); new base T (2/34); total (121/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
CAAGGCAACGTTTTACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTAACGACTTTT > CP009273/2705976‑2706272 | cAAGGCAACGTTTTACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATg < 1:433993/149‑1 (MQ=255) cAACGTTTTACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAAt > 1:180141/1‑149 (MQ=255) aCGTTTTACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATaa > 2:1300058/1‑149 (MQ=255) ttttACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAAc < 2:2889500/149‑1 (MQ=255) ttttACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAAc > 1:3533052/1‑149 (MQ=255) tttACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAAcc < 1:1025602/149‑1 (MQ=255) tttACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAAcc < 2:1792054/149‑1 (MQ=255) ccccAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGc < 1:1747190/149‑1 (MQ=255) cccAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCa < 1:1927812/149‑1 (MQ=255) ccAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAg < 2:891277/149‑1 (MQ=255) ccAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAg < 2:1418085/149‑1 (MQ=255) aGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGa > 2:1161101/1‑149 (MQ=255) gCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGaa < 2:596531/149‑1 (MQ=255) gCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGaa < 2:596438/149‑1 (MQ=255) aCCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGaaaaa < 2:2401489/149‑1 (MQ=255) aCCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGaaaaa < 2:8765/149‑1 (MQ=255) aCCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGaaaaa > 2:4439382/1‑149 (MQ=255) ggTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTTATAGTAAATCCATTACGACGAAGCACTGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACgg < 1:2348574/149‑1 (MQ=255) ggTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACgg > 1:1144182/1‑149 (MQ=255) gTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGc > 1:4390317/1‑149 (MQ=255) gTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGc > 2:3795119/1‑149 (MQ=255) ccATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATa > 2:3995886/1‑149 (MQ=255) cATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAg > 2:3656411/1‑149 (MQ=255) cATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAg > 2:3161457/1‑149 (MQ=255) gcgcCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCAc < 2:380615/149‑1 (MQ=255) gcCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCg > 2:817117/1‑149 (MQ=255) gcCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCg > 1:2625446/1‑149 (MQ=255) cccAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCgg > 1:2683856/1‑149 (MQ=255) cAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCgggg > 2:1723116/1‑148 (MQ=255) cAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGG‑AAAACGGCGATAGCACCGGGTg < 2:4278251/149‑1 (MQ=255) aaaaaaaTACCATCCGTCCCAACTTACATCGCACCGCGATCGTGAGCAACAAAAAACTGTTTAAAATTAAAACCATGACGACGACGCACGGATGTAGACTGTGACATTAAAATAAAACCTGGCAGGAAAAACGGCGATAGCACCGGGTg < 2:4152696/146‑1 (MQ=255) aTAAAATCCCATCGGTTCCCACTTACCTCGCACCGCTATGGTGAGCAAAAAAAAACTTTTTAAAAGTAAATCCATTCCGACGAAGCAGGGTTGTAGACTTTGACATTAAAATAAAACCTGGCCGGAAAAACGGCGATAGCACCGGGTga < 1:2937754/149‑1 (MQ=255) aTAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTga > 1:2529623/1‑149 (MQ=255) aaaTACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACGGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGaa > 2:4409864/1‑149 (MQ=255) aaTACCATCCGTTCCCACTTTCATCGCCCAGCGATCGTGAGCAACAAAAAACTGTTTAACCGTAAAGCCATTACGACGACGCCCGGTTGTAGACTGTGACATGAAAATAAAACCTGGCAGGAAAAACGGCGAGAGCACCGGGTGAGAAc < 2:4038713/149‑1 (MQ=255) aaTACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACTTGAAAATAAAACCTTGCTGGAAAAACGGCGATAGCACCGGGTGAGAAc < 2:657749/149‑1 (MQ=255) aCCATCCGTTCCCACTTTCATCGCACAGCGATCGTGGGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAACATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAAt > 2:1857236/1‑149 (MQ=255) ccATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATa > 1:613627/1‑149 (MQ=255) ttCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCgaga > 2:4468567/1‑149 (MQ=255) tCCCACTTTAATCGCACAGCGATCGTGAGCAAAAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCTGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGaa < 2:2308057/149‑1 (MQ=255) aCTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGTAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGa < 2:3975526/149‑1 (MQ=255) aCTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGa < 2:279763/149‑1 (MQ=255) aCTATCATCGCACACCGATCGTGACAAACAAAAAACTGTTTAAAAGAAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGa < 2:3442672/149‑1 (MQ=255) tttCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAACCCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGata < 1:387124/149‑1 (MQ=255) tttCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGata < 1:387268/149‑1 (MQ=255) aTCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCa > 1:677008/1‑149 (MQ=255) tCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCAt > 1:4040271/1‑149 (MQ=255) cGCACAGCTATCTTGAGAAAAAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGTATTTAGACTGTGACATTAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATa < 2:1216727/149‑1 (MQ=255) gCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACa > 2:3331236/1‑149 (MQ=255) gCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACa > 2:2756520/1‑149 (MQ=255) ctaTCTTGAGAAAAAAAAAACTGTTTAAAATTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAg < 2:2621695/147‑1 (MQ=255) gATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGa > 1:14222/1‑149 (MQ=255) ttCGTTACCAAAAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGAt < 2:622865/148‑1 (MQ=255) tCGTGAGAAAAAAAAAACTTTTTAAAAGTAAATCAATTACGACGACGCACGTTTGTAGACTGTGACATTAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATg < 1:3051744/149‑1 (MQ=255) gTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGaa > 1:2372864/1‑149 (MQ=255) agaaacaaAAAACTTTTTAAAAGTAAATCAATTACGACGAAGCACGTATGTAGACTGTGAATTTAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAt < 2:1642131/146‑1 (MQ=255) aGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAt > 1:867114/1‑149 (MQ=255) aGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAt > 2:274390/1‑149 (MQ=255) aGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAt < 2:2562631/149‑1 (MQ=255) gaaaaaaaaaaCTTTTTAAAAGTAAATCCTTTACGACGAAGCACGGTTGTAGACTGTGAAATTAAAATAAAACCTTGCAGTAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAtt < 1:943859/144‑1 (MQ=255) gCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGAATGTGACATTAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGAtt < 2:4624546/149‑1 (MQ=255) caacaaAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTg > 2:243497/1‑149 (MQ=255) aaaaaaaaaCTGTTTAAAAGTAAATCCTTTACTACGAAGCACGGTTGTAGACTGTTACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGc < 1:3978079/146‑1 (MQ=255) acaaAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCa > 2:2835862/1‑149 (MQ=255) caaAAAACTTTTTAAACGTAAATCCATTACGACGAAGCACGTTTGTATACTGTTACATTAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAg < 1:4220398/149‑1 (MQ=255) aaaaCTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCg > 2:3591541/1‑149 (MQ=255) aaCTGTTTAAAAGTAAATCAATTACGACGAAGCACGGATGTAGACTGTGACATTAAAATAAAAAATTTCAGGAAAAACTGCGATAGCAACGGGTGATAACAAAAAACGATAAGCGATATCCATAAAAAAATATGAAGATTTAATCCGTa > 2:2108873/1‑149 (MQ=255) aCTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTaa < 2:636113/149‑1 (MQ=255) ttAAAATTAAATCCATAACGACTAAGCACGTATGTAGACTGTTAAATAAAAAAAAAACCTTCAAGTAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCt < 1:491344/149‑1 (MQ=255) tAAAAGTAAATCCATTACGACTAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCta < 2:518567/149‑1 (MQ=255) aaaataaaaTCCATTACGACTAAGCACGGATGTATACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCtat < 2:432943/143‑1 (MQ=255) aaaaGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCtat < 2:2069021/149‑1 (MQ=255) aaaGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCtata > 2:2504576/1‑149 (MQ=255) aaaGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCtata < 2:4652378/149‑1 (MQ=255) gTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGACGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATc > 2:2554148/1‑149 (MQ=255) gTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATc < 1:362028/149‑1 (MQ=255) gTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATc > 1:138617/1‑149 (MQ=255) aaaTCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAg > 2:3671712/1‑149 (MQ=255) ttccgacgaACCACGGATGTAGACTTTGAAATTAAAATAAAACCTGGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCca < 1:2095424/146‑1 (MQ=255) ttACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCca > 1:2878994/1‑149 (MQ=255) gacgaAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCcacaca > 2:2473748/1‑149 (MQ=255) acgaAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACag > 1:2387749/1‑149 (MQ=255) gaAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACagag > 2:1533324/1‑149 (MQ=255) cACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAg > 1:4578054/1‑149 (MQ=255) cGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGaa < 2:301298/149‑1 (MQ=255) ggATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAAc > 2:3683552/1‑149 (MQ=255) aTGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACAt > 2:4399361/1‑149 (MQ=255) tGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATg < 1:3161457/149‑1 (MQ=255) gTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGa > 1:3701031/1‑149 (MQ=255) gTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGa < 2:1077586/149‑1 (MQ=255) gTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGa < 2:1787881/149‑1 (MQ=255) gACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTg > 1:1654056/1‑149 (MQ=255) aCTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGt > 1:1769908/1‑149 (MQ=255) cTGTGACATTAAAATAAAACCTTGCAGTAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTa < 2:1695509/149‑1 (MQ=255) cTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTa < 2:920771/149‑1 (MQ=255) cTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTa > 1:743712/1‑149 (MQ=255) cTGTGACATGAAAAAAAAACGTGGCTGTAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTa < 1:4516041/149‑1 (MQ=255) aaCATTAAAATAAAACCTTGCAGTAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTAACGa < 1:411386/148‑1 (MQ=255) tGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTAACGACttt > 2:1685707/1‑149 (MQ=255) tGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTAACGACttt < 1:1111360/149‑1 (MQ=255) | CAAGGCAACGTTTTACCCCAGCCACCGGTGCCCATGCGCCCAATAAAATACCATCCGTTCCCACTTTCATCGCACAGCGATCGTGAGCAACAAAAAACTGTTTAAAAGTAAATCCATTACGACGAAGCACGGATGTAGACTGTGACATGAAAATAAAACCTTGCAGGAAAAACGGCGATAGCACCGGGTGAGAACAATACCCGAGAAGCGATATCCATACAAACAGATGAAGATTGCAGCCGTAACGTCTATAATCAGCGCCCCACACAGAGGTAGAACATGACTGTAACGACTTTT > CP009273/2705976‑2706272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |