Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,010 G→T 12.6% L72I (CTT→ATT)  ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0100GT12.6% 434.9 / 9.3 207L72I (CTT→ATT) ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (106/63);  new base T (11/23);  total (119/88)
Fisher's exact test for biased strand distribution p-value = 1.99e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 220 total aligned reads displayed.

GTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAT  >  CP009273/234862‑235155
                                                                                                                                                    |                                                                                                                                                 
      aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAAt                                                                                                                                             >  2:3579855/1‑149 (MQ=255)
       cATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAAtt                                                                                                                                            <  2:4290294/149‑1 (MQ=255)
        atatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTa                                                                                                                                           <  2:1389056/149‑1 (MQ=255)
         tatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAATTAAAATTAc                                                                                                                                          >  1:2551988/1‑149 (MQ=255)
          atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACa                                                                                                                                         >  2:3820065/1‑149 (MQ=255)
           tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                        >  2:2307094/1‑149 (MQ=255)
           tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                        <  2:2483918/149‑1 (MQ=255)
           tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                        >  2:223390/1‑149 (MQ=255)
           tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACAt                                                                                                                                        >  2:465038/1‑149 (MQ=255)
              tgtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATTATTTTATTATCGTAATTAAAATTAAATGaa                                                                                                                                     >  1:1085093/1‑149 (MQ=255)
               gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTATCGTAAGTAAAATTACATGAat                                                                                                                                    >  1:2537705/1‑149 (MQ=255)
               gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATTATCGTAAGTAAAATTACATGAat                                                                                                                                    >  1:1877778/1‑149 (MQ=255)
                tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAata                                                                                                                                   <  1:1885181/149‑1 (MQ=255)
                tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAata                                                                                                                                   <  1:233336/149‑1 (MQ=255)
                     aaaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaa                                                                                                                              >  2:1889234/1‑149 (MQ=255)
                      aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAATTAAAATTACATGAATATTTaaa                                                                                                                             >  2:469702/1‑149 (MQ=255)
                       aGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAATAATTATTTTATTATAGTAATTAAAATTAAATGAATATTTtaaa                                                                                                                            >  1:2467232/1‑149 (MQ=255)
                       aGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaaa                                                                                                                            <  1:1660222/149‑1 (MQ=255)
                        ggAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaaaa                                                                                                                           <  2:3694676/149‑1 (MQ=255)
                           gCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGTATATTTAAAAAGGa                                                                                                                        >  2:66666/1‑149 (MQ=255)
                              aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaaa                                                                                                                     <  1:1485633/149‑1 (MQ=255)
                               ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAc                                                                                                                    <  1:2449336/149‑1 (MQ=255)
                                tAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGTTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGaaaaag                                                                                                                   >  1:2630183/1‑147 (MQ=255)
                                tAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                                   >  2:2497558/1‑149 (MQ=255)
                                 aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAAATATTTTATTATATTAATTAAAAATAAAATAATAATTAAAAAGTaaaaaaa                                                                                                                  >  1:2812153/1‑146 (MQ=255)
                                 aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGATTTATAAATATTTTATTTTAGTAAGTAAAAATAAAAGTAAATTTAAAAAGGAAAAAGa                                                                                                                  >  1:2812517/1‑149 (MQ=255)
                                  aaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGTAAGTAAAATTAAAAGAATATTTAAAAAGGAAAACGAc                                                                                                                 >  1:1258230/1‑149 (MQ=255)
                                  aaGGTGATATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTTTTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                                 <  2:1403585/149‑1 (MQ=255)
                                         tATTACGTTTGCTATTTGTAAAAATATAAGTGTTAGCTGTTTGGTTTTGTCTGGGGCGAATTTGACTACCTTCGTTTTTTTGATTATTAATGATTTTTTTATCGTAATTAAATTTACTTTAATATTTAAAAAGTAAAACGACATGAAAc                                                                                                          <  2:4098879/149‑1 (MQ=255)
                                             aCGATTGTTTTTTGTAAAAATATATGTGTTTGGTGTTTTGTTTTGTGTGTGGGGAATTTGACTACCTGCGTTTTTTTTTTTAATATTGTTTTTATTATGTTAATTAAATTTACATGAATATTTAAAATGTAAAACGACATGAAACCGaa                                                                                                      <  2:918370/149‑1 (MQ=255)
                                                aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATTTTTTTTTTTTAGTTATTAAAATTAAATTTATATTTTTTAATTTTAACTACATGAAACCGaggaa                                                                                                   >  1:3813096/1‑145 (MQ=255)
                                                 tAGTTATTATTAAAAATATAAGTTTTAGATGTTTTGTTATGTGTGTGGCTAATTTGACTACCTTCTTTTTTTTTTTTAATATTTATTTTTTTATCTTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGcac                                                                                                  <  2:593949/149‑1 (MQ=255)
                                                   gCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTTAGAATGATTTTATTATAGTTAGTAAAATTACATGAATATTTTTAAAGGGAAGAGTCATGAAACCGACGGACAg                                                                                                >  2:4527208/1‑149 (MQ=255)
                                                   gCTACTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAg                                                                                                >  2:4330040/1‑149 (MQ=255)
                                                    cTATTATTAAAAATATAATAGTAAGCTTTATTGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGa                                                                                               <  1:384547/149‑1 (MQ=255)
                                                       ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATc                                                                                            >  2:155903/1‑149 (MQ=255)
                                                         aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCaa                                                                                          >  2:4610389/1‑149 (MQ=255)
                                                          gTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAGACGACATGAAACCGAAGCACAGAATCAAc                                                                                         <  1:3128738/149‑1 (MQ=255)
                                                           tAAAAATATAAGTGTTAGCTGTATTTTTATGTCTGTGGCGAATTTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTATCTTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACa                                                                                        <  2:2375765/149‑1 (MQ=255)
                                                              aaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCCAAGCACACAATCAAAAtta                                                                                     >  1:2669703/1‑148 (MQ=255)
                                                                  ataAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACAATATCCa                                                                                 >  1:2244953/1‑149 (MQ=255)
                                                                    aagttttATCTGTATTTTTATGTCTGTGGCTAAATTTACTACCTTGTTTTTTTTGATTATGATTTATTTTATTATCTTAAGTAAATTTAATTTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAAt                                                                               <  2:1231640/144‑1 (MQ=255)
                                                                     agagTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTATCCAATc                                                                              >  1:317425/1‑149 (MQ=255)
                                                                     agagTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGAACAGAATCAACATTCTCCAATc                                                                              >  2:2567404/1‑149 (MQ=255)
                                                                      gagTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCa                                                                             >  2:780334/1‑149 (MQ=255)
                                                                      gagTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTATCCAAtaa                                                                             >  2:255854/1‑147 (MQ=255)
                                                                         ttAGCTTTATTTTTTTTTCTGTGGCTAATTTGACTACATTCTTTTTTTTGATTAATATTGATTTTTTTATTTTAATTAAATTTAAATTATTATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaa                                                                          <  1:1000264/149‑1 (MQ=255)
                                                                           aGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATGAATATTTAAAAATGTAAAAGACATGAAACCGAAGCACAGAATCAAAAATATCCAATCATaaaa                                                                        >  1:106422/1‑149 (MQ=255)
                                                                           aGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGTAAACGACATGAAACCGAAGCACCAAATCAACAATCTCCAATAATaaaa                                                                        >  2:4004797/1‑149 (MQ=255)
                                                                              tttATTTTTATGTCTGTGGCTAAATTTACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                     <  2:2762761/147‑1 (MQ=255)
                                                                              tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCTTTTTTTTGATTAATAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                     <  2:370468/149‑1 (MQ=255)
                                                                              tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                     >  2:1109742/1‑149 (MQ=255)
                                                                              tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAaaat                                                                     >  2:4490294/1‑149 (MQ=255)
                                                                              tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAAGACATGAAACCGAAGCACAGAATCAACATTCACCAATCATAAAatat                                                                     >  2:2072952/1‑149 (MQ=255)
                                                                              tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATTAATATTTAAAAAGGAAAAAGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCAAAAAatat                                                                     >  2:4489852/1‑149 (MQ=255)
                                                                               gttttGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGATTAATAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATAtt                                                                    <  2:3784874/146‑1 (MQ=255)
                                                                                  ttGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGCACAGAATCAACATTATCCAATCATAAAATATTTcc                                                                 >  2:3808379/1‑149 (MQ=255)
                                                                                    gTTATTTCTGTGCCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTAATATCGTAAATAAAATTACAGTAATATTTAAAAAGGAAAAACACATTAAAACGAAGCACAGAATCAACAATATACAATAAAAAAataaatactt                                                               >  2:581401/1‑142 (MQ=255)
                                                                                     ttATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATCGTAAGTAAAATTACAAGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAAACAACAATCTCCAATCAAAAAATATTTCCCTg                                                              >  2:3373077/1‑149 (MQ=255)
                                                                                      tttGTCTGTGGCTAAATTGAATACCTTCTTTTTTTTGATTAATATTTATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTgg                                                             <  1:290562/147‑1 (MQ=255)
                                                                                      tATGTCTGTGGAGAATTTGAATACCTTCTTTTTTTTTATTAAGAATTTTTTTATTATCGTAATTAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTgg                                                             <  1:2600867/149‑1 (MQ=255)
                                                                                       aTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAATTAAAATTACATGAATATTTAAAAAGGAAAACGACAAGAAACCGAAGCACAGAATCAACATTATACAATCAAAAAAAATTTCCGTGGa                                                            >  1:238057/1‑149 (MQ=255)
                                                                                        tGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGGAAGTAAAATTACATGAATATTTAAAAATGAAAACGACATGAAACCCAATCACAGAATAAACAATCACCAATAAAAAAAAAATTCCGTTGAg                                                           >  1:794337/1‑149 (MQ=255)
                                                                                            tgtgGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCAtt                                                       >  2:3020174/1‑149 (MQ=255)
                                                                                              tgGCGAAATTGACTACCTTCGTTTTTTTGAGTAAGAATGATTTTATTAAAGTAAGTAAAATTACAAGAAAATTTAAAAAGGCAAAAGACAGGAAACCGAACCACAGAATCAACAATCTCCAAACATAAAATATTTCCGTGGAGCAattt                                                     >  2:3287013/1‑149 (MQ=255)
                                                                                                gctaaaTTGACTACCTTCTTTTTTTTGATTAAGAATTATTTTATTATCTTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttat                                                   <  2:625802/146‑1 (MQ=255)
                                                                                                   aaaTTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTAAAAGAAAAATTAAAAAGGAAAACGACATGAAACCCAAGCACAGAATCAAAATTCAACAAACATAAAAAATATACGAGGATCAATTtattat                                                >  1:3949862/1‑149 (MQ=255)
                                                                                                    atttGACTAACTTGTTTTTTTTTATTAATAATTTTTTTATTATCTTAATTAAAATTAAATGAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTattatt                                               <  2:478782/147‑1 (MQ=255)
                                                                                                    atttGAATACCTTCTTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTattatt                                               <  2:115406/147‑1 (MQ=255)
                                                                                                      ttGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGa                                             >  2:2727586/1‑149 (MQ=255)
                                                                                                      ttGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACAAGAAACCGAAGCACAGAATAAACATTCTCCAATCATAAAATATTTACGTGGAGCATTTTATTATTGa                                             >  2:477666/1‑149 (MQ=255)
                                                                                                       tGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGaa                                            <  2:3545560/149‑1 (MQ=255)
                                                                                                            aCCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGCACAGAATCAACATTCTCCAATCATAAAAAAATTCCGTGGAGCATTTTATTATTGAATATag                                       >  2:259460/1‑149 (MQ=255)
                                                                                                               ttCGTTTTTTTTATAAATAATTATTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                    <  2:160256/149‑1 (MQ=255)
                                                                                                                 cGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGtt                                  <  2:1122197/149‑1 (MQ=255)
                                                                                                                 atttttttttttttATAATTTTTTTATTATCTTAAATAAAATAAAATTAATTTTTAAAATGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGtt                                  <  1:1665939/147‑1 (MQ=255)
                                                                                                                      ttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACt                             <  2:273448/149‑1 (MQ=255)
                                                                                                                        tttaTTAATAATTTTTTTATTATATTAATAAAAATTAAATTAATATTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTcc                           <  1:2497558/146‑1 (MQ=255)
                                                                                                                           ataaaGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTCCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                        <  2:3132970/146‑1 (MQ=255)
                                                                                                                           aTTAATAATTATTTTTTTATCGTAATTAAATTTAATTTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                        <  1:944119/149‑1 (MQ=255)
                                                                                                                           aTTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                        >  1:4664251/1‑149 (MQ=255)
                                                                                                                            ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                       >  1:4096601/1‑149 (MQ=255)
                                                                                                                            ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                       <  2:794337/149‑1 (MQ=255)
                                                                                                                                   tGATTTTATTATCGTAATTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACa                <  2:49300/149‑1 (MQ=255)
                                                                                                                                    gATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa               >  1:989271/1‑149 (MQ=255)
                                                                                                                                     aTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaaa              >  1:3379810/1‑149 (MQ=255)
                                                                                                                                      ttttATTATCGTATGTAATATTAAATGATTATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag             <  2:4347328/149‑1 (MQ=255)
                                                                                                                                      ttttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag             >  2:175481/1‑149 (MQ=255)
                                                                                                                                       tttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaaga            >  2:2064509/1‑149 (MQ=255)
                                                                                                                                       tttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaaga            >  1:3520890/1‑149 (MQ=255)
                                                                                                                                         tattatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaag          >  2:858483/1‑149 (MQ=255)
                                                                                                                                         tattatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaag          >  1:4761331/1‑149 (MQ=255)
                                                                                                                                           ttttgttaattaaATTTACATTAATTTTTAAAATGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa        <  1:3730722/143‑1 (MQ=255)
                                                                                                                                           ttatattaattaaAATTAAATAAAAATTTAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa        <  1:939749/143‑1 (MQ=255)
                                                                                                                                            tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAt       >  2:3930953/1‑149 (MQ=255)
                                                                                                                                              tCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTg     >  2:2662495/1‑149 (MQ=255)
                                                                                                                                                gtaagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGaa   >  2:2834056/1‑149 (MQ=255)
                                                                                                                                                 taagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt  <  2:2382810/149‑1 (MQ=255)
                                                                                                                                                 taagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt  >  2:1709768/1‑149 (MQ=255)
                                                                                                                                                 taagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt  >  1:4513916/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAT  >  CP009273/234862‑235155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: