| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,966,846 | C→A | 7.4% | E126* (GAA→TAA) | lplT ← | lysophospholipid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,966,846 | 0 | C | A | 7.4% | 1159.2 / 40.4 | 309 | E126* (GAA→TAA) | lplT | lysophospholipid transporter |
| Reads supporting (aligned to +/- strand): ref base C (142/144); new base A (13/10); total (155/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
CCGTAGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGG > CP009273/2966698‑2966992 | gTAGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGc < 1:2237602/149‑1 (MQ=255) tAGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGcc < 2:688086/149‑1 (MQ=255) tAGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGcc < 2:562259/149‑1 (MQ=255) aGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCg > 2:4360964/1‑149 (MQ=255) ggCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCga > 2:1226069/1‑149 (MQ=255) ccAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGCCgaga < 1:174833/149‑1 (MQ=255) cAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGaa > 1:3955801/1‑149 (MQ=255) gcgcATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATACGCCGAGAATAcc < 1:4090405/149‑1 (MQ=255) cgcATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCAGTAAACCGTTCGCTGTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCg > 2:2395213/1‑149 (MQ=255) gcATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGt > 1:4264090/1‑149 (MQ=255) aTGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTAt < 1:1490211/149‑1 (MQ=255) tGCGGCCAGGGCGACTAGGACATGCCAGTCAGCCAGCACACCACCGGATACTGAACCGAGAAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTAtt < 1:99194/149‑1 (MQ=255) gCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGc < 2:1172689/149‑1 (MQ=255) ggCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTg < 2:4122882/149‑1 (MQ=255) ggCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTg < 1:1329923/149‑1 (MQ=255) cgacgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGaa < 2:2831522/149‑1 (MQ=255) gacgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAACTCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAAt < 1:3608612/149‑1 (MQ=255) gacgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAAt > 1:3070763/1‑149 (MQ=255) gacgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAAt < 1:3414171/149‑1 (MQ=255) gacgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAAt < 1:4706791/149‑1 (MQ=255) acgaGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATa > 1:3676385/1‑149 (MQ=255) cgaGGACTTGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAg < 1:2867431/149‑1 (MQ=255) ggACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCt < 2:1374702/149‑1 (MQ=255) ggACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCt < 1:3062543/149‑1 (MQ=255) aCATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTgc > 1:1632071/1‑149 (MQ=255) aCATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTgc < 1:657304/149‑1 (MQ=255) gCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTgcagca > 2:4510393/1‑149 (MQ=255) gTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCaa < 2:13384/149‑1 (MQ=255) gTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCaa > 1:1192288/1‑149 (MQ=255) cacaCCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACccacca > 2:595590/1‑149 (MQ=255) cacaCCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACccacca < 2:1822392/149‑1 (MQ=255) accaccGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAAAAGGCTGCAGCACCAACACCCACCAGCg > 1:2075037/1‑149 (MQ=255) caccGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGta < 2:4394395/149‑1 (MQ=255) ccGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGtata < 2:4547314/149‑1 (MQ=255) gCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTGTTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGcc < 2:813725/149‑1 (MQ=255) gCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGcc < 2:3943596/149‑1 (MQ=255) gCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGcc < 2:1155245/149‑1 (MQ=255) gCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGcc > 2:2625096/1‑149 (MQ=255) cTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCg < 1:589877/149‑1 (MQ=255) tACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCga > 1:3107644/1‑149 (MQ=255) gAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCgagaca > 2:3523546/1‑147 (MQ=255) gAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGaaa > 1:1502385/1‑149 (MQ=255) aaCCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAAc > 1:992555/1‑149 (MQ=255) ccGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACgg > 1:4332658/1‑149 (MQ=255) cGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGa < 2:4234241/149‑1 (MQ=255) gAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGag > 1:2508175/1‑148 (MQ=255) gCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTg < 2:1549210/149‑1 (MQ=255) cAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGa < 1:2657541/149‑1 (MQ=255) aaaaTCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGAt < 1:3182759/149‑1 (MQ=255) aaaTCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATa < 2:2129704/149‑1 (MQ=255) aaaTCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATa > 1:1109836/1‑149 (MQ=255) gccgcTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTTCTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCTCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCaaa < 2:2655425/149‑1 (MQ=255) cgcTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGc < 1:2573943/149‑1 (MQ=255) tATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGa < 2:1017157/149‑1 (MQ=255) tGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGTAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATa > 2:2313230/1‑149 (MQ=255) ggTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATAc < 1:499192/149‑1 (MQ=255) ggTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATAc < 1:1370740/149‑1 (MQ=255) tAGAAGCTTCCATTAATCCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTg < 2:2569473/149‑1 (MQ=255) aGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTgg < 1:355528/149‑1 (MQ=255) gAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGc > 2:2668743/1‑149 (MQ=255) cTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTgcg > 1:1281942/1‑149 (MQ=255) ttCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTgcgc > 1:4089174/1‑149 (MQ=255) ttCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTgcgc > 1:2761377/1‑149 (MQ=255) ccATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGccc > 1:1254312/1‑149 (MQ=255) aTTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCcag > 2:2752502/1‑149 (MQ=255) ttAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCcagc > 1:2025219/1‑149 (MQ=255) tAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCcagca > 1:241312/1‑149 (MQ=255) aaaCCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCcagcag > 2:2208218/1‑149 (MQ=255) aaCCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCagcagc > 1:1946787/1‑149 (MQ=255) aCCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCt > 2:789436/1‑149 (MQ=255) cGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTc > 1:154572/1‑149 (MQ=255) ttAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAg < 2:1706685/149‑1 (MQ=255) gCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGcc < 1:3781825/149‑1 (MQ=255) tttCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGt > 1:1144064/1‑149 (MQ=255) ttCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCATCAGGCCgat > 2:4080697/1‑147 (MQ=255) tCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTg > 2:2873979/1‑149 (MQ=255) cACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTgg > 2:3060972/1‑149 (MQ=255) cACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTgg > 1:4194856/1‑149 (MQ=255) aCTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGc < 1:4116540/149‑1 (MQ=255) tAACTTACTACCCGTGGTTAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCaa > 1:1324179/1‑149 (MQ=255) aCTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAAc > 1:801099/1‑149 (MQ=255) ttACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAAcat < 2:292849/149‑1 (MQ=255) ctacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAAcatcat > 2:4377055/1‑149 (MQ=255) ctacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAAcatcat > 1:1821699/1‑149 (MQ=255) ctacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAAcatcat < 1:837881/149‑1 (MQ=255) tacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACatcatc > 1:452124/1‑149 (MQ=255) tacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACatcatc > 1:3852827/1‑149 (MQ=255) tacCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACatcatc > 1:2845236/1‑149 (MQ=255) cccGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCAc > 1:3276287/1‑149 (MQ=255) ccGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCAcc > 1:3146435/1‑149 (MQ=255) ggTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGc > 2:928924/1‑149 (MQ=255) gTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGcc > 2:4719158/1‑149 (MQ=255) ttAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCt < 2:366292/149‑1 (MQ=255) tAATTAGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt < 1:2603286/149‑1 (MQ=255) aaTTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt < 2:556652/149‑1 (MQ=255) aaTTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt < 2:3329044/149‑1 (MQ=255) aTTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTg < 1:3537661/149‑1 (MQ=255) aTTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTg < 2:4581668/149‑1 (MQ=255) aTTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTg > 1:2268277/1‑149 (MQ=255) ttCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg > 1:750779/1‑149 (MQ=255) | CCGTAGGCCAGTGCGCATGCGGCCAGGGCGACGAGGACATGCCAGTCAGCCAGCACACCACCGGCTACGGAACCGAGCAAAATCGCCGCTATGGTAGAAGCTTCCATTAAACCGTTAGCTTTCACTAACTTACTACCCGTGGTTAATTCGCCGAGAATACCGTATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGG > CP009273/2966698‑2966992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |