| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,993,612 | C→T | 5.7% | intergenic (‑362/‑92) | ygeR ← / → xdhA | LysM domain‑containing M23 family putative peptidase; septation lipoprotein/xanthine dehydrogenase, molybdenum binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,993,612 | 0 | C | T | 5.7% | 986.7 / 27.0 | 283 | intergenic (‑362/‑92) | ygeR/xdhA | LysM domain‑containing M23 family putative peptidase; septation lipoprotein/xanthine dehydrogenase, molybdenum binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (111/152); new base T (10/5); total (126/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
TCACATTGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTAT > CP009273/2993464‑2993760 | cacaTTGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCt < 2:1857868/149‑1 (MQ=255) cacaTTGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCt < 2:3103771/149‑1 (MQ=255) acaTTGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCtt < 2:2479585/149‑1 (MQ=255) tGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCTGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTTACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGTTTAGAc < 1:2030774/149‑1 (MQ=255) tGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGAc < 1:383028/149‑1 (MQ=255) aTTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCATGCTTataata > 2:74369/1‑144 (MQ=255) ttttATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTTCCTGTTTAGACTaa > 1:1398015/1‑149 (MQ=255) tttATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACaaaa > 2:570815/1‑149 (MQ=255) ttATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAAt > 1:718464/1‑149 (MQ=255) ttATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTATGGCGTAAATCTTGCCTTCTTAGACTAAAt > 2:3539879/1‑149 (MQ=255) aTCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGTTTAGACTAAATCt > 2:2226486/1‑149 (MQ=255) tCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCAGCTTAGACTAAATCtt > 1:1153444/1‑149 (MQ=255) cGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCttt > 2:79987/1‑149 (MQ=255) ccACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGTTTAGACTAAATCTTTGc > 2:2094215/1‑149 (MQ=255) aCTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCa < 1:2761220/149‑1 (MQ=255) cATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATaa < 1:3587164/149‑1 (MQ=255) tatTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATATTGCCTGCTTAGAATAAAACATTTCCATaaaa > 1:2322886/1‑147 (MQ=255) atTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGaa < 1:1244453/149‑1 (MQ=255) atTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGaa > 2:2195781/1‑149 (MQ=255) tGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAAcc < 1:1713813/149‑1 (MQ=255) tGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAAcc < 2:3788020/149‑1 (MQ=255) gATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTTGCGTAAATATTTCCTGCTTATACTAAATATTTTCCATAATAACCa > 1:465851/1‑149 (MQ=255) aTACGTATCACTGCCCCTATTCAGAGTCCTGGTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTTGCGTAAATCTTTCCAGGTTAGACTAAATATTTTCCATAATAACCaa > 2:2136347/1‑149 (MQ=255) cGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATg < 1:79987/149‑1 (MQ=255) cACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCaa < 2:1005937/149‑1 (MQ=255) cTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAAt < 1:1260287/149‑1 (MQ=255) gCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTATGGCGTAAATATTTCCTGCTTATAATAAATCTTTTCCATAAGAACCAAAAGTTAAAAtag > 1:4083956/1‑147 (MQ=255) ccccTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATATTGCCAGCTTAGACTAAATCTTTGCCAAAAGAACCAAATGTTCAAATCgc > 1:1030127/1‑148 (MQ=255) aTTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGa < 2:4337952/149‑1 (MQ=255) tCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGAtt < 2:416392/149‑1 (MQ=255) tCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGAtt < 1:1501354/149‑1 (MQ=255) gagTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCt < 2:814974/149‑1 (MQ=255) gTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAAAATTTCCTGCTTATACTAAATATTTGCCAAAATAACCAAAAGTTAAAATAGAGGGGATTTCTAt > 1:1699584/1‑149 (MQ=255) tGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGaa < 2:1923874/149‑1 (MQ=255) gTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAg < 1:981865/149‑1 (MQ=255) gTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCATAGACTAAATCTTTTCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAg > 2:197585/1‑149 (MQ=255) gTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTGTCTTGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCgg > 1:114507/1‑149 (MQ=255) tATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTGTGGCGTAAATATTGCCTGCTTAGACTAAATCTTTGCCATAAGAAACAAATGTTCAAATAGAGGGGGTTTCTATGGTAGCGCggg > 1:883928/1‑149 (MQ=255) tATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTTCCTGCTTAGACTAAATCTTTTCCATAAGAAACAAATGTTAAAATCGAGGGGATTTCTATGGAATCGCggg > 1:4589555/1‑149 (MQ=255) tCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGACGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGaa > 1:1013695/1‑149 (MQ=255) tatCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTTGCGTAAATATTTACTGCTTAGAATAAATATTTGACATAATAAAAAAAATTTAAAATAGAGGGGATTTATATGGAATCGCGGGAAGCa > 1:3615325/1‑149 (MQ=255) tatCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTTCCATAAGAACCAAAAGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCa > 1:1029640/1‑149 (MQ=255) tatCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAAACTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCa > 1:3904425/1‑149 (MQ=255) tatCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAAAATTTCCTGCGTATACTAAAAATTTTCCAAAATAAACAAAAGTTCAAATAGAGGGGATTTGTTTGGTAGCGCGGGAAGCa > 1:435543/1‑149 (MQ=255) atCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCaa < 1:4632690/149‑1 (MQ=255) gtgtTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGc < 1:2576014/149‑1 (MQ=255) tgtTTATTTAACGTCATCACACTTCCTACCTCCCCTAACGCTAATCGTCGTGTCTGGCGAAAATCTTGCCTGGGTTGACTAAATCTGTGCCAAGAGAACCAAAGGTTCAAATCGGCGGGCTTGCTAAGGAAGCGCCGGAAGCAACCGCt > 2:4418309/1‑149 (MQ=255) gtTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCAGCTTAGACTAAATATTTGCCAAAATAAACAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTa > 1:3865231/1‑149 (MQ=255) gtTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAAACTTTCCGGCGTAGACTAAATATTTGCCAAAAGAAACAAATGTTAAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAAACGCTa > 1:4051892/1‑149 (MQ=255) ttttttAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACg < 1:2629922/149‑1 (MQ=255) tttAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGt > 1:769512/1‑149 (MQ=255) tttAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAAAATTGCCTGTTTAGACAAAATATTTTCCATAAGAAACAAAAGTTCAAATAGAGGGGATTTCTATGGTAGCGCGGGAAGCAACCGCAACCGGt > 1:4017108/1‑149 (MQ=255) aCGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAAt < 1:4566398/149‑1 (MQ=255) cGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAAta < 1:2655884/149‑2 (MQ=255) atcaCACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATaatgc < 1:689264/149‑1 (MQ=255) tcaCACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTTGCGTAAAACAAGCCGGCGTAGAAAAAAAATTTGCCATAAGAACCAAAAGATCAAATCCAGGGGATTTCTCTGGAAGCGCCGGAACCCACCCCTACGGGTGAATaaagca > 1:4448019/1‑149 (MQ=255) cacaCTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATaatgcat < 1:573687/149‑1 (MQ=255) cacaCTCCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATaatgcat < 1:1359485/149‑1 (MQ=255) cTTCCTACCTCCCCTAACGCTTATCGTCGTTTGTGGGGTAAATCTTGCCTGCGTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTAGATGGAAGCGCGGGAAGCAACCGCGAAGGGTGTATAATGCATgcgc > 1:511191/1‑149 (MQ=255) cTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATgcgc < 1:2176313/149‑1 (MQ=255) ttCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGCTTTCTATGGAAGCGCGGGAAGCAACCGCTAAGGGTGAATAATGCATGcgcg > 2:1471702/1‑149 (MQ=255) ttCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCGGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTAAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAAACGCTACGGGTGAATAATGCATGcgcg > 1:4765748/1‑149 (MQ=255) tCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGt < 2:24616/149‑1 (MQ=255) cTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCg > 1:3071263/1‑149 (MQ=255) tACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGa < 1:4297669/149‑1 (MQ=255) aCCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGTTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGAt < 1:4371025/149‑1 (MQ=255) cGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTaa < 2:608480/149‑1 (MQ=255) gCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAg < 1:1221188/149‑1 (MQ=255) gCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAg < 1:1600110/149‑1 (MQ=255) cgtcgtTTCTGGCGTAAATCTTGCCTGTTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCAcc < 2:2341959/149‑1 (MQ=255) cgtcgtTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCAcc < 1:1659946/149‑1 (MQ=255) tcgtTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACcgg < 1:853410/149‑1 (MQ=255) ttttCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATTCATGCGCGTCGATGCCATTGCTAAGGTCACcgggc < 2:4179602/148‑1 (MQ=255) gtTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACcgggc < 1:1933733/149‑1 (MQ=255) gtTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACcgggc < 1:3506535/149‑1 (MQ=255) tttCTGGCGTAAATCTTGCCTGCTTAGAATAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACcgggcg > 2:30069/1‑149 (MQ=255) cTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCgggcgggc > 2:3270192/1‑149 (MQ=255) tGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCa < 1:1079881/149‑1 (MQ=255) ggCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCAc > 2:3650519/1‑149 (MQ=255) gCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACg > 2:68893/1‑149 (MQ=255) gTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGat < 1:4699164/149‑1 (MQ=255) tAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGata > 2:2780389/1‑149 (MQ=255) aaaTCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGatat < 2:2818508/149‑1 (MQ=255) aaTCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGAtata < 1:2461383/149‑1 (MQ=255) aaTCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGAtata < 2:4083956/149‑1 (MQ=255) aTCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATAc < 1:3147252/149‑1 (MQ=255) aTCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATAc < 1:3389579/149‑1 (MQ=255) tCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACt < 1:2136347/149‑1 (MQ=255) tCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACt < 2:2293381/149‑1 (MQ=255) tGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGAc < 2:559151/149‑1 (MQ=255) gCCTGTTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACg > 1:2925713/1‑149 (MQ=255) ccTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGa > 2:591129/1‑149 (MQ=255) cTGCTTAGAATAAATCTATGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCAATTGCTAATGTCACCGGGCGGTCACGATATACTGACGAt > 2:1765970/1‑149 (MQ=255) gCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 1:3553540/149‑1 (MQ=255) gCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 2:1561354/149‑1 (MQ=255) gCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 2:1594030/149‑1 (MQ=255) gCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 1:2899644/149‑1 (MQ=255) gCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAgta > 2:2878137/1‑149 (MQ=255) gCTTAGACTAAATCTTTGAAATAAGATCCAAATGTTAAAATCGAGGGGATTTCTATGGAAGCGCGTGAAGCAACAGCTTCGGGTGAATAATGCATGCGAGTCGATGCAATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 2:1197828/149‑1 (MQ=255) gCTTAGACTAAAACTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGAGCGGGAAGCAACCTCTACGGGTGAATAATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAtta < 2:3585182/149‑1 (MQ=255) | TCACATTGATTTTATCGCCACTCATATTGATACGTATCACTGCCCCTATTCAGAGTCCTGTTTCGTATCATATCTGTGTTTTTTTAACGTCATCACACTTCCTACCTCCCCTAACGCTTATCGTCGTTTCTGGCGTAAATCTTGCCTGCTTAGACTAAATCTTTGCCATAAGAACCAAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTAT > CP009273/2993464‑2993760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |