| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,006,444 | G→T | 35.2% | I385I (ATC→ATA) | yqeB ← | XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,006,444 | 0 | G | T | 35.2% | 504.1 / 273.5 | 310 | I385I (ATC→ATA) | yqeB | XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold |
| Reads supporting (aligned to +/- strand): ref base G (101/99); new base T (45/64); total (147/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 318 total aligned reads displayed.
CGGGTGGTATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGTTTCATC > CP009273/3006298‑3006591 | gggTGGTATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGAtt > 2:2725929/1‑149 (MQ=255) ggtATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTa > 1:3608601/1‑149 (MQ=255) ggtATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTa < 1:310912/149‑1 (MQ=255) tATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACt > 1:139563/1‑149 (MQ=255) tGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTgg < 1:4645170/149‑1 (MQ=255) cccATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGc > 2:3545733/1‑149 (MQ=255) cccATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGc < 1:2883551/149‑1 (MQ=255) ccATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGcc < 2:2692946/149‑1 (MQ=255) ccATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGcc > 2:1487589/1‑149 (MQ=255) ccATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGcc < 2:3331631/149‑1 (MQ=255) aataTTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCatat < 2:439067/149‑1 (MQ=255) tatTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCt > 1:536789/1‑149 (MQ=255) atTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTg > 2:2701967/1‑149 (MQ=255) ttGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGc < 2:807251/149‑1 (MQ=255) ttGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGc < 1:1251765/149‑1 (MQ=255) ggAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGt < 2:1093099/149‑1 (MQ=255) aaCACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTc > 1:79659/1‑149 (MQ=255) aaCACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTc < 2:3794494/149‑1 (MQ=255) acacCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTcc > 2:2225613/1‑149 (MQ=255) ccGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCaa > 1:2274644/1‑149 (MQ=255) ggTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAAt > 1:4673199/1‑149 (MQ=255) ggTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAAt < 1:1325920/149‑1 (MQ=255) ggTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAAt < 1:3890193/149‑1 (MQ=255) gTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAAtt < 2:2358577/149‑1 (MQ=255) aTTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCt < 2:2783766/149‑1 (MQ=255) ttCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTg > 2:3084003/1‑149 (MQ=255) tcCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGttt > 1:471874/1‑149 (MQ=255) tcCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGttt > 2:621725/1‑149 (MQ=255) tcCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGttt < 1:3358331/149‑1 (MQ=255) cgcACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCAGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCa < 2:1732131/149‑1 (MQ=255) caACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAAt < 2:740616/149‑1 (MQ=255) aaCCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATa > 1:3976771/1‑149 (MQ=255) aCCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAg < 1:962616/149‑1 (MQ=255) cAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCg > 1:4449678/1‑149 (MQ=255) aaaTCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTccacc > 2:2990201/1‑149 (MQ=255) aaTCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTccacca > 1:2775344/1‑149 (MQ=255) aTCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCcaccac > 1:3205924/1‑149 (MQ=255) aTCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCcaccac > 1:2972227/1‑149 (MQ=255) cACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGc > 1:3911000/1‑149 (MQ=255) cACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGc > 2:1283759/1‑149 (MQ=255) ccTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCaa < 1:1563839/149‑1 (MQ=255) tGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAg < 1:4195811/149‑1 (MQ=255) tGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAg < 1:2643835/149‑1 (MQ=255) gACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGc > 2:3408041/1‑149 (MQ=255) aCCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAAGTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCg < 1:2244933/149‑1 (MQ=255) cGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGt < 2:426248/149‑1 (MQ=255) gAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGtt > 1:4434106/1‑149 (MQ=255) gAGCCAGTGCCCGCGATTTGGTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGtt < 2:2797016/149‑1 (MQ=255) aGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGttt > 2:309713/1‑149 (MQ=255) aGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGttt > 2:3603511/1‑149 (MQ=255) ccAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCa > 2:3870298/1‑149 (MQ=255) gCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTtca < 2:404272/149‑1 (MQ=255) cccGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTtcat < 2:1285133/149‑1 (MQ=255) ccGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTtcatc > 2:1572812/1‑149 (MQ=255) cgcgATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTtcatca > 2:601109/1‑149 (MQ=255) cgcgATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTtcatca < 1:2457411/149‑1 (MQ=255) gcgATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCaa < 2:4709161/149‑1 (MQ=255) cgATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAg < 2:911824/149‑1 (MQ=255) aTTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCa > 1:1735878/1‑149 (MQ=255) tttGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCaa < 2:4003511/149‑1 (MQ=255) ttGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAAt > 2:2145416/1‑149 (MQ=255) ttGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAAt < 2:2525726/149‑1 (MQ=255) gTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGa < 2:3060658/149‑1 (MQ=255) ttCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAAc < 2:2605614/149‑1 (MQ=255) ttCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAAc < 2:703911/149‑1 (MQ=255) cAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAg < 1:2328982/149‑1 (MQ=255) aaaTTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAg < 1:283537/148‑1 (MQ=255) ttACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCg < 2:1878241/149‑1 (MQ=255) tACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCgg < 2:506429/149‑1 (MQ=255) tACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCgg > 1:4349217/1‑149 (MQ=255) ccGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGa < 1:1933479/149‑1 (MQ=255) ccGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGa < 1:603029/149‑1 (MQ=255) attaCAATCCTTAACAGCAGTAAAGCCCGGCCCAAGCGATATTGTTACTTGTGACATATCTGACCGCGTTCCCAAATTCTTTTTCTACAGAATAGATTCCAACACTCAAAGCGGTTTCAGTTCATCAATCAATTAACATTCGGGATCTa < 1:1669157/146‑1 (MQ=255) tGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTAc > 1:2186065/1‑149 (MQ=255) tGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTAc > 2:4607959/1‑149 (MQ=255) aCAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCa < 2:3809842/149‑1 (MQ=255) aaTCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCACAGCGGTTTCAGTGCATCAAGCACTGAACAGGCGGGATCTACCATc > 2:4065868/1‑149 (MQ=255) ccTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATcaca < 2:4732149/149‑1 (MQ=255) ccTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATcaca < 1:903729/149‑1 (MQ=255) cTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAg < 2:2104122/149‑1 (MQ=255) ttCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAgg < 2:4183021/149‑1 (MQ=255) cccAGCAGTAAAGCCCGGCCCAAGCTCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGgaa < 2:1999470/149‑1 (MQ=255) cccAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGgaa < 2:841526/149‑1 (MQ=255) cagcagTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGgaatg < 1:3697029/149‑1 (MQ=255) cagcagTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGACCAGGCGGGATCTACCATCACAGgaatg > 1:4547162/1‑149 (MQ=255) agcagTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGgaatga > 1:1382101/1‑149 (MQ=255) agTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATATACAATCACAGGAATGAATc > 1:1011748/1‑149 (MQ=255) gTAAAGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATcc > 2:4368416/1‑149 (MQ=255) aaaGCCCGGCCCAAGCGCGATTGTAACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATcctc > 1:1971331/1‑147 (MQ=255) aaGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCcgcg > 1:518300/1‑149 (MQ=255) aGCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGt < 1:476836/149‑1 (MQ=255) aGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGt < 2:2328692/149‑1 (MQ=255) gCCCGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGtt > 2:3656312/1‑149 (MQ=255) cccGGCCCAAGCGCTATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTc < 1:2540376/149‑1 (MQ=255) gCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTa > 1:4035618/1‑149 (MQ=255) ccAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAg < 1:3476911/149‑1 (MQ=255) aaGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGtt > 1:1164420/1‑149 (MQ=255) aGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGttt > 2:4786730/1‑149 (MQ=255) cgctATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGTTTCa < 1:2701967/149‑1 (MQ=255) cgATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGTTTCATc < 1:2004729/149‑1 (MQ=255) | CGGGTGGTATGCCCCATAATATTGCCAGGAACACCGGTATTCTCCTGCGCACAACCAGAGTAAATCACCTGACCGAGCCAGTGCCCGCGATTTGTTTCAATTACCGCATGACAATCCTTCCCAGCAGTAAAGCCCGGCCCAAGCGCGATTGTTACTGGTGCCATATCTGCCCGCGTTCCCAAATTCTGTTTCGCCAGAATAGCGTCCACCACGCAAAGCGGTTTCAGTTCATCAAGCAATGAACAGGCGGGATCTACCATCACAGGAATGAATCCGCGTTCGGTAAGTTTCATC > CP009273/3006298‑3006591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |