| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,052,315 | C→A | 7.5% | D124Y (GAT→TAT) | rpiA ← | ribose 5‑phosphate isomerase, constitutive |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,052,315 | 0 | C | A | 7.5% | 1169.1 / 40.5 | 311 | D124Y (GAT→TAT) | rpiA | ribose 5‑phosphate isomerase, constitutive |
| Reads supporting (aligned to +/- strand): ref base C (138/149); new base A (19/5); total (157/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
CCGTGGACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCT > CP009273/3052167‑3052462 | gTGGACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCaa < 1:1198747/149‑1 (MQ=255) gTGGACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCaa < 1:2066838/149‑1 (MQ=255) tGGACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAAc < 2:2795142/149‑1 (MQ=255) gACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCt < 2:3995118/149‑1 (MQ=255) aCGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTg > 1:3119523/1‑149 (MQ=255) cGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGc < 1:1003960/149‑1 (MQ=255) gTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCt > 1:599279/1‑149 (MQ=255) cGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTg > 1:4149215/1‑149 (MQ=255) aGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGa > 2:3947085/1‑149 (MQ=255) aGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGa < 1:1138073/149‑1 (MQ=255) gATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAg > 2:4218744/1‑149 (MQ=255) tCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCg < 1:2050567/149‑1 (MQ=255) aCGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTc < 2:2568116/149‑1 (MQ=255) cGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCt < 2:698568/149‑1 (MQ=255) cGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCt < 2:1384785/149‑1 (MQ=255) gTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTg > 1:1516581/1‑149 (MQ=255) ccATTTTCGGTCACCACGCCCTGACTGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGTGATAACTTCTACTGTCAGCGGGAATTTACCCATAATATCAACCTTCTTGGAAGCGTCTGCAAt < 2:3427692/149‑1 (MQ=255) ccATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAAt > 1:3388749/1‑149 (MQ=255) ccATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAAt < 2:3511996/149‑1 (MQ=255) ccATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAAt < 2:4297127/149‑1 (MQ=255) cATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATa > 2:1100968/1‑149 (MQ=255) ttATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACa < 2:3234404/149‑1 (MQ=255) aTCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCACTACAGa > 2:230371/1‑149 (MQ=255) tCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAAt > 1:847772/1‑149 (MQ=255) tCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAAt > 1:2208971/1‑149 (MQ=255) caccacGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAAtt > 1:2495483/1‑149 (MQ=255) ccacGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAAtttt > 1:3273298/1‑149 (MQ=255) acGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTc > 1:2756484/1‑149 (MQ=255) acGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTc < 2:1433705/149‑1 (MQ=255) tGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAAc > 1:4227135/1‑149 (MQ=255) tGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAAc < 2:1778949/149‑1 (MQ=255) gACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAAcc > 1:4312647/1‑149 (MQ=255) ggTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGaa < 1:2473228/149‑1 (MQ=255) ggTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGaa < 2:2642952/149‑1 (MQ=255) gTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAg > 2:4390788/1‑149 (MQ=255) ttCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCaa < 1:1754602/149‑1 (MQ=255) gtCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACGGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCaa < 2:1195791/148‑1 (MQ=255) ccGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATg < 1:510440/149‑1 (MQ=255) cGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGa < 2:3811397/149‑1 (MQ=255) cGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGa < 2:476982/149‑1 (MQ=255) gacgacCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGAtt > 2:2664478/1‑149 (MQ=255) acgacCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGAttt < 1:666191/149‑1 (MQ=255) acCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGAtttttt < 2:3359258/149‑1 (MQ=255) acCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGAtttttt > 2:2276204/1‑149 (MQ=255) acCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGAtttttt > 1:3348896/1‑149 (MQ=255) gCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCAc > 2:3607768/1‑149 (MQ=255) gCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCAc < 1:2443462/149‑1 (MQ=255) cccAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACg < 2:1347587/149‑1 (MQ=255) cAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACggg > 2:3002927/1‑149 (MQ=255) aGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCTGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGt < 2:1686163/149‑1 (MQ=255) gTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTc < 2:1320478/149‑1 (MQ=255) gTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTc > 2:4727161/1‑149 (MQ=255) tttCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCa > 2:2954898/1‑149 (MQ=255) ttCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAg < 1:4704502/149‑1 (MQ=255) cACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAgcg > 1:1610733/1‑149 (MQ=255) cACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAgcg > 1:4066527/1‑149 (MQ=255) cACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAgcg > 1:2428973/1‑149 (MQ=255) gACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGcgccgcgccg > 2:1518826/1‑149 (MQ=255) gcCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCgccgccgcc < 1:4673265/149‑1 (MQ=255) ccACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCt > 1:4539806/1‑149 (MQ=255) aCTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCttt > 2:1665191/1‑149 (MQ=255) aCTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCttt < 1:1777382/149‑1 (MQ=255) aCTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCttt > 1:1390558/1‑149 (MQ=255) cTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTg > 2:514200/1‑149 (MQ=255) cTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTg > 2:2226853/1‑149 (MQ=255) tGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGa > 2:3086607/1‑149 (MQ=255) tGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGa < 1:708277/149‑1 (MQ=255) gCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGAt > 2:1568851/1‑149 (MQ=255) cACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATc > 1:1472475/1‑149 (MQ=255) cTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCAt > 1:3125072/1‑149 (MQ=255) cTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCAt < 2:3329681/149‑1 (MQ=255) aCGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCAttt < 2:2702605/149‑1 (MQ=255) cATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCAtgt > 2:826175/1‑149 (MQ=255) cATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCAtgt < 2:2671515/149‑1 (MQ=255) cATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCAtgt > 1:1930908/1‑149 (MQ=255) aTCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCAtgtg > 2:1692551/1‑149 (MQ=255) aTCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCAtgtg > 1:92256/1‑149 (MQ=255) aTAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGtt < 2:2406531/149‑1 (MQ=255) cTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAtt < 2:1874071/149‑1 (MQ=255) cTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAtt < 1:366223/149‑1 (MQ=255) ttCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCGTTGATCATTTGCATGTGGCCGTTGAttt > 2:2598131/1‑149 (MQ=255) tCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTc > 2:183848/1‑149 (MQ=255) cTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCa < 2:4595169/149‑1 (MQ=255) tACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCAt > 2:214512/1‑149 (MQ=255) tACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCAt < 1:2954898/149‑1 (MQ=255) aCTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATc < 1:2264925/149‑1 (MQ=255) tGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTg > 2:1348540/1‑149 (MQ=255) ggCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgc > 1:441092/1‑149 (MQ=255) ttACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa > 1:2830711/1‑149 (MQ=255) tACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:3866104/1‑149 (MQ=255) tACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 2:3757938/1‑149 (MQ=255) aCCCAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGa > 2:697083/1‑149 (MQ=255) ccAGACTATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAAGTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATg < 1:3856642/149‑1 (MQ=255) ccAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATg > 1:3255525/1‑149 (MQ=255) cAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGc > 1:1027883/1‑149 (MQ=255) cAGAATATAAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTATTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGATGATTTCATCTGCGCCATCAACGTAGATGc > 2:4120306/1‑149 (MQ=255) atCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc < 1:2619520/149‑1 (MQ=255) atCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc < 2:742394/149‑1 (MQ=255) tCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCt < 1:2305472/149‑1 (MQ=255) tCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCt > 2:766340/1‑149 (MQ=255) | CCGTGGACGTCGAGGATCACGTTGCCATTATCGGTCACCACGCCCTGACGGTATTCCGGACGACCGCCCAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCT > CP009273/3052167‑3052462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |