| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,080,755 | T→G | 20.5% | F231V (TTC→GTC) | metK → | S‑adenosylmethionine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,080,755 | 0 | T | G | 20.5% | 437.6 / 69.7 | 283 | F231V (TTC→GTC) | metK | S‑adenosylmethionine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (85/135); new base G (60/3); total (145/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 300 total aligned reads displayed.
CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAC > CP009273/3080607‑3080902 | gATGCTGTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgttt < 1:2554400/149‑1 (MQ=255) gTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAt < 2:3235456/149‑1 (MQ=255) agCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGt > 2:1093234/2‑149 (MQ=255) gCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTg > 1:2355177/1‑149 (MQ=255) ccACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTAT‑AGGTGGcccc > 1:1197413/1‑148 (MQ=255) cACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCaa < 2:575462/149‑1 (MQ=255) aCTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑t < 2:1614046/149‑1 (MQ=255) aCTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCact > 1:4551131/1‑147 (MQ=255) cTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑Tg < 1:4529282/149‑1 (MQ=255) cTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑Tg > 2:2493118/1‑149 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑Tggg < 2:4391726/149‑1 (MQ=255) aGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGt > 2:1939046/1‑149 (MQ=255) aGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGt < 1:2989083/149‑1 (MQ=255) aGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGt < 1:486556/149‑1 (MQ=255) cACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGa < 2:3736836/149‑1 (MQ=255) cACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGa < 2:2416738/149‑1 (MQ=255) aCTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑AGGTGGGCCCA‑AGGGTGAc > 1:2179771/1‑149 (MQ=255) aCTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGATCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGAc > 1:2382054/1‑149 (MQ=255) aaGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGt > 2:1964866/1‑149 (MQ=255) aaGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGt < 2:1676715/149‑1 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTc < 2:920323/149‑1 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTc < 1:674817/149‑1 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTc < 2:3308932/149‑1 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑GGGGTGACTGCGGTc > 2:3653758/1‑149 (MQ=255) gagaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCt < 1:1756417/149‑1 (MQ=255) aTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGAc < 1:3045570/149‑1 (MQ=255) aTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑AGGGTGACTGCGGTCTGAc > 2:2063155/1‑149 (MQ=255) tCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACt < 1:1214806/149‑1 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGt > 2:2423311/1‑149 (MQ=255) ccAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTc < 1:3548372/149‑1 (MQ=255) ccAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTc < 1:803242/149‑1 (MQ=255) ccAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAAGTCGGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTc < 2:2906240/149‑1 (MQ=255) cAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGGGGTCTGACTGGTCg > 2:99366/1‑149 (MQ=255) gAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTa > 2:3175486/1‑149 (MQ=255) aaaTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑GGGGGGCCCAA‑TGGGTGACTGCGGTCGGACTGGTCGtga > 2:1286163/1‑147 (MQ=255) gCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGTCTGCGGTCTGACTGGTCGTAAAATTa > 1:3163693/1‑149 (MQ=255) cTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTAt < 2:2604670/149‑1 (MQ=255) gCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑AGGTGGCCCAA‑TGGGTGTCTGCGGTCTGACTGGTCGTAAAATTATCg > 2:1202822/1‑149 (MQ=255) gCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑TTGGTGACTGCGGTCTGACTGATCGTAAAATTATCg > 2:1700804/1‑149 (MQ=255) cAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGt < 1:3694239/149‑1 (MQ=255) agaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg < 2:2521114/149‑1 (MQ=255) agCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATa > 2:3141259/1‑149 (MQ=255) gCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGGCCAA‑AGGGTGTCAGCGGTCTTACTGGTGGGAAAAATATAGTTtataa > 1:952803/1‑148 (MQ=255) gTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATACGGT‑GCCCCA‑TGGGTGGCTGGGGTCTGACAGGGCGGAAAAATATCGGTGATaacaa > 1:4633518/1‑145 (MQ=255) aTGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑AGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAAATATCGTTGATACCTAcgg > 2:171332/1‑149 (MQ=255) aTGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTAT‑CGGTGGCCCCA‑AGGGTGAAGGCGGTCAGACGGGTCGTAAAATTATCGTTGATaacaaccg > 2:2113632/1‑142 (MQ=255) ggAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTAT‑CGGTGGGCCCA‑TGGGTGACTGCGGTGTGACTGGGCGTAAAAATATAGTTGTTAACTAcggcg > 1:4171135/1‑149 (MQ=255) gAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCAAcggcgg > 2:2757408/1‑149 (MQ=255) gAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGGGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTTACGTTGTTAACTAaggcgg > 2:2802058/1‑149 (MQ=255) agagATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCCA‑TGGGTGACTGCGGTCTTACTGGTCGTAAAATTATAGTTTTTAACAAAGGCGGCa > 1:3900420/1‑149 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCAt < 1:1682152/149‑1 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCAt < 2:4295982/149‑1 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCAt < 1:3207012/149‑1 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGGAAAATTATCGTTGATACCAACGGCGGCCTgg > 1:1143155/1‑149 (MQ=255) atcatcAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGGTAT‑AGGTGGGCCAA‑TTGGTGTCGGCGGTCTGACTTGTCGTAAAAATATAGTTGATACCTACGGCGGCATTgc > 1:1860123/1‑149 (MQ=255) tcatcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTAT‑AGGGGGGCCCA‑AGGGTGTCGGCGGGGTGACTGGTCGTAAAATTATAGTTGATAACTAAGGCGGCATGgcg > 1:3004900/1‑149 (MQ=255) tcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑AGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTAGTAAAATTATCGTTGATAACTAAGGCGGCATTGCGCGt > 2:2956489/1‑149 (MQ=255) tcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACCGCGGCATGGCGCGt > 2:4491637/1‑149 (MQ=255) aGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCAc > 2:3376051/1‑149 (MQ=255) ccAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACgg < 1:4291536/149‑1 (MQ=255) cAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGTCTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCCTGGCGCGTCACGGt > 1:397475/1‑149 (MQ=255) cAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTAT‑CGGTGGCCCAA‑AGGGTTACTGCGGTCTGACTGGTCGGAAAATTATCGTTGATAACTACGGCGGCATGGCGCGTCACGGt > 1:3504130/1‑149 (MQ=255) aTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTgg < 1:3292914/149‑1 (MQ=255) aTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTgg < 2:2193661/149‑1 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTAT‑AGGTGGGCCAA‑ATGGTGTCTGCGGTCTGAATGGTCGTAAAAATATCGTTGTTAACAACGGCGGCATGGCGCGTCACGGGGGc > 1:1935485/1‑149 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGc > 2:1519078/1‑149 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGGTTCGTTTT‑CGGTGGCCCCA‑TGGGTGACGGCGGGCTGACGGGTCGGAAAAATATCGTTGATACCGACGGCGGCATGGCGCGGCACGGTGGc > 2:4116822/1‑149 (MQ=255) tGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGt < 1:1553790/149‑1 (MQ=255) tGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGt < 1:4097408/149‑1 (MQ=255) gCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTg < 1:3594733/149‑1 (MQ=255) cccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGc < 1:2002253/149‑1 (MQ=255) ccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCa < 1:1134948/149‑1 (MQ=255) ccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCa < 1:1205854/149‑1 (MQ=255) ccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGGAAAATTATCGTTGATACCTAAGGCGGCATGGCGCGTCACGGTGGCGGTGCa > 2:3838907/1‑149 (MQ=255) cTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATtc < 1:159711/149‑1 (MQ=255) gAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTAGTTAT‑CGGTGGCCCAA‑GGGGTTACTGCGGTCTGACGGGTCGTAAAATTATCGTTGATAACTACCGCGGCCTGGCGCGGCACGGTGGCGGTGCATtcac > 2:469327/1‑147 (MQ=255) aaTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑CGGTGGCCCAA‑AGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTctct > 2:52363/1‑149 (MQ=255) tGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTgg < 1:923757/149‑1 (MQ=255) gACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAT‑AGGTGGCCCAA‑AGGGTGACTGCGGTCTGACTGGTCGTAAAAATATAGTTGTTAAAGAACGCGGCATGGCGCGTCAACGTGGCGGTGCATTCTCATGTaaat > 1:3396400/1‑148 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt < 1:1387960/149‑1 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt < 1:3643640/149‑1 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑AGGTGGCCCAA‑TGGGTGACTGCGGTCTGACGGGTCGTAAAATTATAGTTGATACCTAAGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAatat > 2:1380076/1‑149 (MQ=255) ttCTGCCACCAAATTCTTCATCACCCCGACCGGTCGGTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATc < 2:589635/149‑1 (MQ=255) tCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATcc < 2:908704/149‑1 (MQ=255) cTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 2:3517509/149‑1 (MQ=255) cTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 2:1128442/149‑1 (MQ=255) acaAATTATTTATGAAACCGTCCGGTAGTTTTGGTTT‑AGGTGGGCCAATTGGGGGACT‑CGGTCGGTATGGGCGTTAAATTTTTCTTGTTTACTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCaaaa < 1:1102645/148‑1 (MQ=255) aaaTTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAAGGCGGCATTGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAATATCCATCAAAAGt > 2:1842985/1‑149 (MQ=255) aaTTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGGGGCCCCA‑GGGGTGACTGCGGTCTGACTGGTCGTAAAAATATCGTTGAAACCGACGGCGGCAAGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCAACAAAAGTg > 2:2320578/1‑149 (MQ=255) cttcATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAcc < 1:1049082/149‑1 (MQ=255) catcaACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGtt < 2:4400794/149‑1 (MQ=255) atcaACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTc > 2:1484785/1‑149 (MQ=255) cGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGcc < 1:1286110/149‑1 (MQ=255) ggTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTACAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgc < 2:678151/149‑1 (MQ=255) ggTCGTTTCGTGAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgc < 2:4633518/149‑1 (MQ=255) gTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgca > 2:3971394/1‑149 (MQ=255) cgtttcgttAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgcagc < 1:973853/149‑1 (MQ=255) gtttcgttAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgcagca > 2:3418635/1‑149 (MQ=255) tttcgttAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAc < 2:4366353/149‑1 (MQ=255) tttcgttAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAc < 1:1317213/149‑1 (MQ=255) | CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTAT‑CGGTGGCCCAA‑TGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAC > CP009273/3080607‑3080902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |