Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP009273 89,331 Δ3 bp 5.1% coding (1432‑1434/1767 nt) ftsI → transpeptidase involved in septal peptidoglycan synthesis (penicillin‑binding protein 3)

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 89334 =318 (1.030)16 (0.060) 12/258 NT 5.1% coding (1435/1767 nt) ftsI transpeptidase involved in septal peptidoglycan synthesis (penicillin‑binding protein 3)
?CP009273 = 89330 300 (1.040)coding (1431/1767 nt) ftsI transpeptidase involved in septal peptidoglycan synthesis (penicillin‑binding protein 3)

AACAACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/89492‑89334
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccgccTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCTA  <  CP009273/89330‑89182
                                                                                                                                                                                                                                                                                                                    
AACAACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCAC                                                                                                                                                                >  1:4880825/1‑150
AACAACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCAC                                                                                                                                                                >  1:4735405/1‑150
 ACAACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACG                                                                                                                                                               >  1:4869747/1‑150
   AACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCC                                                                                                                                                             >  1:4985014/1‑150
    ACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCG                                                                                                                                                            >  2:3437721/1‑150
      AACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCC                                                                                                                                                          >  2:3642464/1‑150
      AACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCC                                                                                                                                                          <  2:2493553/150‑1
       ACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCG                                                                                                                                                         >  1:4217732/1‑150
       ACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCATTAATAGCAGCCTTAACGCCGCag                                                                                                                                                         >  1:4217889/1‑148
           GCGCGAAGCGCGGCTGACTCGCAGGCGCCACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTG                                                                                                                                                     <  2:4351159/150‑1
           GCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTG                                                                                                                                                     <  2:696862/150‑1
                AAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGC                                                                                                                                                >  2:3065001/1‑150
                                           CCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACA                                                                                                                     <  1:3999776/150‑1
                                           CCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACA                                                                                                                     <  1:3999672/150‑1
                                                         AATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGA                                                                                                       <  1:4834142/150‑1
                                                              ATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCG                                                                                                  <  1:3767591/150‑1
                                                              ATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCG                                                                                                  <  1:3767242/150‑1
                                                                            CGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCA                                                                                    >  1:416555/1‑150
                                                                             GACTGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCAC                                                                                   <  2:1223192/150‑1
                                                                                CGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGG                                                                                >  1:3504863/1‑150
                                                                                CGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGG                                                                                >  1:5409263/1‑150
                                                                                     GGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACC                                                                           >  2:882794/1‑150
                                                                                     GGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACC                                                                           >  2:882825/1‑150
                                                                                          GACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGG                                                                      <  1:2243391/150‑1
                                                                                                                                      TAATCGCCGCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGC                          >  2:3638126/1‑150
                                                                                                                                              GCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTT                  <  2:2279646/150‑1
                                                                                                                                              GCCTTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTT                  >  2:2477457/1‑150
                                                                                                                                                 TTCACGCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGTCGATAGTTGCG               >  2:3427320/1‑150
                                                                                                                                                      GCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGAC          >  2:3076693/1‑150
                                                                                                                                                      GCCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGAC          >  2:3077542/1‑150
                                                                                                                                                       CCGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCCCCACAGTGCGGACAAGGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACT         <  2:3733461/150‑1
                                                                                                                                                        CGCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTC        >  1:3009402/1‑150
                                                                                                                                                         GCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGACCCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGAGAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCG       >  2:3430298/1‑150
                                                                                                                                                         GCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCG       >  2:3430265/1‑150
                                                                                                                                                         GCCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTGGCGGAGACTCG       >  2:3430283/1‑150
                                                                                                                                                          CCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGC      <  2:1287873/150‑1
                                                                                                                                                          CCGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGC      <  1:3642464/150‑1
                                                                                                                                                           CGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCG     >  1:4233410/1‑150
                                                                                                                                                           CGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCG     >  1:4233058/1‑150
                                                                                                                                                           CGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCG     <  2:765463/150‑1
                                                                                                                                                           CGCCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCG     <  2:765484/150‑1
                                                                                                                                                            GCCTGGTAGCGCCACGCTTTCCATATTATGCACCACAGTGCGGACAATGGTTTCGGGGAAGACCCGTTAACCTGTAACCGGGGGTTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGC    <  1:3258738/150‑1
                                                                                                                                                             CCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCT   <  2:1577142/150‑1
                                                                                                                                                             CCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCT   <  1:809314/150‑1
                                                                                                                                                             CCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCT   >  2:5009000/1‑150
                                                                                                                                                             CCTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCT   <  1:4092274/150‑1
                                                                                                                                                              CTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACTATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCTA  <  2:4217889/150‑1
                                                                                                                                                              CTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCTA  <  2:4217732/150‑1
                                                                                                                                                                                                                                                                                                                    
AACAACAACCAGCGCGAAGCGCGGCTGACTCGCAGGCGCAACGCCTGCGGTATAAGCAATATATTTATTGATGTAGCGACCGTCCGGCCCGACCTTTTTCGCGGTACCGGTTTTAATGGCGATACGATAGCCTTTAATCGCCGCCTTCACGCCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/89492‑89334
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccgccTGGTAGCGCCACGCTTTCCATCATATGCACCACAGTGCGGACAATGGATTCCGGGAAGACACGTTCACCGGGAACCGGGGGGTCAACTTTGGTAATCGACAGTGGGCGATAAATGCCGTAGCTGCCGATAGTTGCGTAGACTCGCGCTA  <  CP009273/89330‑89182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.