Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP009273 3,589,657 Δ9 bp 7.5% coding (99‑107/927 nt) livH ← leucine/isoleucine/valine transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3589656318 (1.030)25 (0.080) 17/266 NT 7.5% coding (108/927 nt) livH leucine/isoleucine/valine transporter subunit
?CP009273 3589666 = 313 (1.050)coding (98/927 nt) livH leucine/isoleucine/valine transporter subunit

Only 100 of 383 total aligned reads displayed.

GCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGG  >  CP009273/3589509‑3589805
                                                                                                                                                   |                                                                                                                                                     
gcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGAt                                                                                                                                                     >  1:3187548/1‑150 (MQ=255)
  tGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATaa                                                                                                                                                   >  1:2716971/1‑150 (MQ=255)
   ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAAt                                                                                                                                                  <  2:4647985/150‑1 (MQ=255)
   ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAAt                                                                                                                                                  <  2:688677/150‑1 (MQ=255)
   ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCACGCCGTGGGCGAAGTTGATCATGCCGtaaac                                                                                                                                                  >  1:1199685‑M1/1‑145 (MQ=255)
         gACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa                                                                                                                                            >  1:5085350/1‑150 (MQ=255)
         gACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa                                                                                                                                            <  1:1886743/150‑1 (MQ=255)
             aTTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc                                                                                                                                        >  2:3660514/1‑150 (MQ=255)
               tGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAt                                                                                                                                      <  2:1253916/150‑1 (MQ=255)
               tGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAt                                                                                                                                      <  1:3448512/150‑1 (MQ=255)
               tGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGACCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAt                                                                                                                                      <  1:2681781/150‑1 (MQ=255)
                 cgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATgg                                                                                                                                    >  2:3626154/1‑150 (MQ=255)
                   ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGgtg                                                                                                                                  <  1:4329573/150‑1 (MQ=255)
                    cgacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGgtgt                                                                                                                                 >  1:942418/1‑150 (MQ=255)
                     gacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggc                                                                                                                                <  2:3380361‑M1/150‑24 (MQ=255)
                      acgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAg                                                                                                                               >  2:3323042/1‑150 (MQ=255)
                        gaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCCTGGTGTAGcc                                                                                                                             >  2:3139239/1‑150 (MQ=255)
                               gCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCt                                                                                                                      <  1:75658/150‑1 (MQ=255)
                                cAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTa                                                                                                                     <  2:1754083/150‑1 (MQ=255)
                                 aGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTAt                                                                                                                    >  2:191381/1‑150 (MQ=255)
                                 aGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTAt                                                                                                                    >  2:5521399/1‑150 (MQ=255)
                                 aGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTAt                                                                                                                    >  1:2061267/1‑150 (MQ=255)
                                    tACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAg                                                                                                                 >  2:1031281/1‑150 (MQ=255)
                                    tACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAg                                                                                                                 >  1:559833/1‑150 (MQ=255)
                                     aCCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAgc                                                                                                                >  2:726011/1‑150 (MQ=255)
                                       cagcagCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtact                                                                                                              <  2:2610234‑M1/150‑42 (MQ=255)
                                              cagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTa                                                                                                       >  2:3512273/1‑150 (MQ=255)
                                                  cGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGc                                                                                                   <  1:5407031/150‑1 (MQ=255)
                                                   ggTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGcc                                                                                                  <  2:4986847/150‑1 (MQ=255)
                                                    gTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGAGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTCTCAGCGCGGAGGTACTGccc                                                                                                 >  2:5343998/1‑150 (MQ=255)
                                                      aTCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAg                                                                                               <  2:2668610/150‑1 (MQ=255)
                                                        cAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCg                                                                                             >  1:2034512/1‑150 (MQ=255)
                                                         aaTGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGt                                                                                            <  2:3462777/150‑1 (MQ=255)
                                                         aaTGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGt                                                                                            >  1:3286519/1‑150 (MQ=255)
                                                          aTGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTg                                                                                           <  1:4676724/150‑1 (MQ=255)
                                                            gCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGAc                                                                                         <  1:1426568/150‑1 (MQ=255)
                                                              ccATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaaca                                                                                       <  2:5274796‑M1/150‑65 (MQ=255)
                                                                atcatcatcAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCg                                                                                     >  2:5161534/1‑150 (MQ=255)
                                                                  catcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGtt                                                                                   <  1:1268938/150‑1 (MQ=255)
                                                                  catcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGtt                                                                                   <  2:1157431/150‑1 (MQ=255)
                                                                   atcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTa                                                                                  <  2:2899768/150‑1 (MQ=255)
                                                                     catcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctg                                                                                <  2:4274616‑M1/150‑72 (MQ=255)
                                                                     catcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTaaa                                                                                <  1:1682661/150‑1 (MQ=255)
                                                                     catcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTaaa                                                                                >  2:4349418/1‑150 (MQ=255)
                                                                      atcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAAc                                                                               <  2:158025/150‑1 (MQ=255)
                                                                        caGCGCGGCGATGATCATCAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACAt                                                                             <  2:1680364/150‑1 (MQ=255)
                                                                          gcgcGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATct                                                                           <  1:3676897/150‑1 (MQ=255)
                                                                           cgcgGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctg                                                                          >  2:2799518/1‑150 (MQ=255)
                                                                            gcggcgATGATCATCACTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaa                                                                         <  2:5372421‑M1/150‑79 (MQ=255)
                                                                              ggcgATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctgctg                                                                       <  2:1381175/150‑1 (MQ=255)
                                                                                    gatCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGaa                                                                 >  2:4562522/1‑150 (MQ=255)
                                                                                      tCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAAt                                                               <  1:3849470/150‑1 (MQ=255)
                                                                                        aTAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATAc                                                             >  2:217631/1‑150 (MQ=255)
                                                                                          aaaTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaa                                                           >  1:1153035/1‑150 (MQ=255)
                                                                                            aTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaa                                                         >  1:1666440/1‑150 (MQ=255)
                                                                                             tGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaaa                                                        >  2:2882723/1‑150 (MQ=255)
                                                                                             tGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaaa                                                        <  2:5394191/150‑1 (MQ=255)
                                                                                             tGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaaa                                                        >  1:2471494/1‑150 (MQ=255)
                                                                                             tGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaaa                                                        >  1:4595971/1‑150 (MQ=255)
                                                                                              gagaCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAAc                                                       <  1:2267161/150‑1 (MQ=255)
                                                                                               agaCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACt                                                      <  2:3153126/150‑1 (MQ=255)
                                                                                               agaCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGACGATTGCTATCAGCGCGTAGGTACTGCCCAGCTTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAATCt                                                      <  1:4281553/150‑1 (MQ=255)
                                                                                                  cGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCt                                                   <  1:2124344/150‑1 (MQ=255)
                                                                                                     aGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAg                                                <  1:4448265/150‑1 (MQ=255)
                                                                                                          ccAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATa                                           <  1:1011464/150‑1 (MQ=255)
                                                                                                          ccAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATa                                           >  1:4399742/1‑150 (MQ=255)
                                                                                                          ccAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATa                                           <  1:1157571/150‑1 (MQ=255)
                                                                                                          ccAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATa                                           <  1:3774171/150‑1 (MQ=255)
                                                                                                           cAATCATATACACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATaa                                          <  2:2064187/150‑1 (MQ=255)
                                                                                                           cAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaaactgctcagacataaggtaacctt                                          >  1:4116483‑M1/1‑41 (MQ=255)
                                                                                                               cATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTa                                      <  1:4878697/150‑1 (MQ=255)
                                                                                                                atatAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTaa                                     <  1:5222113/150‑1 (MQ=255)
                                                                                                                atatAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTaa                                     >  2:5463444/1‑150 (MQ=255)
                                                                                                                atatAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTaa                                     <  1:1487410/150‑1 (MQ=255)
                                                                                                                 tataAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAAc                                    <  1:4159861/150‑1 (MQ=255)
                                                                                                                  ataAACCTCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaaactgctcagacataaggtaacctttctaaac                                   <  2:4456282‑M1/150‑117 (MQ=255)
                                                                                                                  ataAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAAcc                                   <  2:3774152/150‑1 (MQ=255)
                                                                                                                   taAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCt                                  >  2:488510/1‑150 (MQ=255)
                                                                                                                    aaaCCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCtt                                 >  1:4813035/1‑150 (MQ=255)
                                                                                                                     aaCCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCttt                                >  1:5357469/1‑150 (MQ=255)
                                                                                                                        cTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTa                             <  1:2854317/150‑1 (MQ=255)
                                                                                                                         tCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaaactgctcagacataaggtaacctttctaaacccgcccg                            <  1:3121636‑M1/150‑124 (MQ=255)
                                                                                                                         tCGCCGTGGGCGAAGTTGATCATGCCGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaaactgctcagacataaggtaacctttctaaacccgcccg                            <  1:354183‑M1/150‑124 (MQ=255)
                                                                                                                          cGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTaaa                           <  2:2471494/150‑1 (MQ=255)
                                                                                                                           gCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAc                          <  2:5100419/150‑1 (MQ=255)
                                                                                                                            ccGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcc                         >  1:800368/1‑150 (MQ=255)
                                                                                                                            ccGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcc                         <  1:2369337/150‑1 (MQ=255)
                                                                                                                                 ggCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcccgccc                    >  1:3978007/1‑150 (MQ=255)
                                                                                                                                    gAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCa                 >  1:4937806/1‑150 (MQ=255)
                                                                                                                                      aGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtt               <  1:3657804/150‑1 (MQ=255)
                                                                                                                                      aGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtt               <  2:2747468/150‑1 (MQ=255)
                                                                                                                                       gTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAttt              <  2:4084738/150‑1 (MQ=255)
                                                                                                                                        ttGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtttt             >  1:1039624/1‑150 (MQ=255)
                                                                                                                                        ttGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtttt             <  2:1477188/150‑1 (MQ=255)
                                                                                                                                        ttGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtttt             >  1:863544/1‑150 (MQ=255)
                                                                                                                                                gCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCgg     <  2:2295037/150‑1 (MQ=255)
                                                                                                                                                 ccGtaaaccatggtgtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaaactgctcagacataaggtaacctttctaaacccgcccgcattttacgggcggtgggatgatc    <  2:2041066‑M1/150‑148 (MQ=255)
                                                                                                                                                 ccGgaaaccctggtggagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcacgaaatacaaaaactgctcagacataaggtaacctttctaaacccgcccgcattttacgggcggtgggatgatc    <  2:4802020‑M1/150‑148 (MQ=255)
                                                                                                                                                  cGtaaaccagggggtagccgatggctatcagcgcgtaggtactgcccagcgtgacgccgttaaacatctgctgcaagaaatacaaaacctgctcagacataaggtaacctttctaaacccgcccgcattttacgggcggtgggatgatca   <  2:3903126‑M1/150‑149 (MQ=255)
                                                                                                                                                   gATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTgg  >  2:809046/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGG  >  CP009273/3589509‑3589805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.