| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 8.2% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 8.2% | 869.6 / 5.1 | 260 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (104/127); new base T (3/26); total (107/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.21e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGTG > CP009273/1118357‑1118655 | gTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTa < 2:1672421/150‑1 (MQ=255)gTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTa < 2:2747021/150‑1 (MQ=255)gTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGAATACCGAACAGGGCGTTCATGTCCAGATTGGCGTCTCCCGTTa > 1:4740984/1‑150 (MQ=255) gTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAggg > 1:4511672/1‑150 (MQ=255) tACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt < 2:2900379/150‑1 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTa < 1:178511/150‑1 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTaa < 1:1650066/150‑1 (MQ=255) cGTCGCATCGACCACGTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAc < 1:1689289/150‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCt > 1:4540899/1‑150 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt < 2:2470448/150‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt > 2:3028388/1‑150 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt > 2:137629/1‑150 (MQ=255) cGACCACTGCCATCTCGTACAGGAACAACGCACCATTTTCTTTATCACACACGGGCAGCGCTTTCAGCTTCAGAGTCCTGGGCGCTTTCTGACGACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg < 1:1882515/150‑1 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 2:4103163/150‑1 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGAATAACGAACAGGGAGTTCATGTCCAGATTGGCGTATCCGGTTTGGGTAAACTTATTAGGctc > 1:817997/1‑150 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCATATTAGGctct > 1:220655/1‑150 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct > 2:2630859/1‑150 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 1:5210384/150‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 1:5210507/150‑1 (MQ=255) ttCCCTCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCCAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACGACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTc < 2:237976/150‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTc < 1:1385229/150‑1 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcg < 2:4947131/150‑1 (MQ=255) ccATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGTCTACCGAACAGGGAGTTCATGTCCAGATTGGGGTCGACGGGTAGGGTAACCCTATTCGGCTCTTcgc > 1:4169317/1‑150 (MQ=255) aTCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGCGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGa > 2:1703423/1‑150 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑c < 1:1550642/150‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACAAACGAACACGGAGGTCATGTCCACATTGGCGGCTCCGGTGAGGGTAACCATAGTCGGCGCGTCGCGACCCAAttt > 1:1406571/1‑150 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTgg > 2:4783544/1‑150 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTgg < 2:419533/150‑1 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGc > 2:1768847/1‑150 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTACGGTTAGGGTAACCGTATTCGGCTCTTCGCGA‑CCAATTTGGCt > 1:2690463/1‑150 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTg < 2:647825/150‑1 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTc < 2:4044595/150‑1 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTc < 1:661383/150‑1 (MQ=255) cGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACAAACCAACAGGGAGTTCATGTCCAGATTTGCGGCTCCCGGTAGGGTAACCATAATAGGCTCTTCGCGA‑CCCAATTGGCTGGTGAg > 1:1903439/1‑150 (MQ=255) cGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGGCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAg > 2:2127445/1‑150 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGGCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGGCAGGTTTg > 2:570531/1‑150 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGt < 2:4656645/150‑1 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGt < 1:5391834/150‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTAAAGTCCAGATTTGCGTCTCCGGTTAGGGTAAACGTATTAGGCACGTCGCGA‑CCAAATTTGCTTGTCAGGTTTGTGAg > 1:600500/1‑150 (MQ=255) tCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAata < 1:2778566/150‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAatat < 2:2858834/150‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAatat < 1:1309674/150‑1 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATggg < 1:2881191/150‑1 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAACTTATTAGGCTCTTAGCGA‑CCAAATTTGCTGGTCAGGTTTGTCAGAACAATATtgg > 2:55198/1‑150 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 2:1309754/150‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCGCCGGTTAGGGTAACCATATTAGGCTCTTCGCGA‑CCAAATTTGCGGGTCAGGTTTGTCAGAAAAAAATGGGCg > 1:4835757/1‑150 (MQ=255) cAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATTTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTAGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGc > 1:3645116/1‑150 (MQ=255) cgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATTGGCGTCAGCCAc > 2:4557614/1‑150 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGcc < 1:1037636/150‑1 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGcc < 1:2041029/150‑1 (MQ=255) ttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCg > 2:3129659/1‑150 (MQ=255) cAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCggg < 2:4877236/150‑1 (MQ=255) aGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGt < 2:3081815/150‑1 (MQ=255) cAGTTTCATGGTCTCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACGTTATTCGGCTCTTCGCGA‑CAATTTGGGCTGGTCAGGTTTGTCATAACAATAGGGGCGTCAGCCACGCCGGGTAAAcc < 2:3788793/150‑1 (MQ=255) cAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc > 2:2469888/1‑150 (MQ=255) cAGTTTCATGGTCGCTTTCTGACAAACGAACACGGAGTTCATGTCCAGATTGGCGTCGCCCGTTATGGTAAACATATTCGGCTATTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc > 2:1458035/1‑150 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGTTGGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCg < 2:2934706/150‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCg < 2:3203278/150‑1 (MQ=255) tttCTTGGTCGATTTCTGACTACCGAACTGGGAGTTCTTGGCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCTGGTTTGTCACAACAATTTGGGCGTCAGCCACGCCGGGTAAACCGat < 1:230663/150‑1 (MQ=255) tctgggTCGCTTTCTGACTACCGAACTGGGAGTTCATGTCCAGATTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGatat < 2:159040/146‑1 (MQ=255) cagggTCGCTTTTTGACTACCGAACAGGGATTTCATGTCCAGATTGGCGTCTCGGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATc < 2:4204995/147‑1 (MQ=255) aTGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCt > 2:3513171/1‑150 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt > 1:1831298/1‑150 (MQ=255) gggTCGCTTTCTGACTACCGAACCGGGTGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt < 2:1066873/149‑1 (MQ=255) ggTCGCTTTCTGACTACCGAACTGGGAGTTCATGTCCAGTTTGGCTTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCttt < 2:4729346/150‑1 (MQ=255) gTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCATTTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtttt < 2:59707/150‑1 (MQ=255) gTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCgttt > 2:2898660/1‑150 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa < 2:449918/150‑1 (MQ=255) gACTACCGAACTGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAattat < 2:912099/150‑1 (MQ=255) aCTACCGAACAGGGAGTTCTTGTCCAGATTGGCTTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAattatt < 2:4388737/150‑1 (MQ=255) cTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta > 1:4856174/1‑150 (MQ=255) tACCGAACAGGTAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat < 2:4746751/150‑1 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 2:2222206/150‑1 (MQ=255) gAACTGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt < 1:3221905/150‑1 (MQ=255) gAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt > 2:2717457/1‑150 (MQ=255) gAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt > 2:1451273/1‑150 (MQ=255) aaCTGGGATTTCTTGTCCTGATTGGCGTCTCCGGTTTGGGTAACATTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCTGGTTTGTCAGAACAATTTGGGCGTAAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 1:4124419/150‑1 (MQ=255) aaCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:3780145/150‑1 (MQ=255) actgggTGTTCTTGTCCTGATTGGCGTCTCCGGTTTGGTTAACCTTTTTCGGCTCTTCGCTA‑CCATTTTGGGTGGTCTGTTTTTTCATAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCg < 1:3899540/147‑1 (MQ=255) aCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCg > 2:4826430/1‑150 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCa > 1:1197575/1‑150 (MQ=255) ggtgTTCATGTCCATATTGGCGTCTCCGTTTTGGTTAACCTTATTCGGCTCTTCGCGA‑CAAATTTGGCTGGTCTGGTTTGACAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAg < 1:3175574/147‑1 (MQ=255) ggAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAg > 1:728741/1‑150 (MQ=255) aGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg > 1:5094720/1‑150 (MQ=255) ttCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGAc > 2:2168685/1‑150 (MQ=255) tCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACt < 2:817997/150‑1 (MQ=255) aGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 2:2298883/1‑150 (MQ=255) gtttGGCGTCTCGGGTTTGGGTAACATTATTCGGATCTTCGCGA‑CCATTTTGGCTGGTCCGGTTTTTCTGAAAATTAGGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt < 1:439667/148‑1 (MQ=255) gttgggggTCGCCGTTTTGGGTAACGTTATGGGGCTCTTCGCGA‑CCATTTTGGGTGGTAAGTTTTGTCAGAACAATTGGGGCGTCAGCCACGCCGGGTAACCCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt < 2:5095960/143‑1 (MQ=255) tttGGGGTCTCGGGTTTGGTTAACTTTTTTCGGCTCTTCGCGA‑CCTTTTTGGGGGGTGTGTTTGGTCATAACATTTTGGGGGCCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 1:3019173/149‑1 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttta > 1:4701039/1‑149 (MQ=255) ggCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATCTCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTg > 1:3367631/1‑150 (MQ=255) ggCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTg > 1:3476498/1‑150 (MQ=255) gCGTCTCCGGTTTGGGTAACCTTAGTCGGCTCTTCGCGA‑CAAATTTGGCTGGTCAGTTTGGTCATAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGt < 2:3298905/150‑1 (MQ=255) cGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGtt > 1:838731/1‑150 (MQ=255) gTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:5510893/1‑150 (MQ=255) gTTAGGGTAACCTTTTTCGGCTCTTCGCGA‑CCATTTGGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATg < 2:5320849/150‑1 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATg > 2:3923282/1‑150 (MQ=255) aGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGgtg > 1:1990882/1‑150 (MQ=255) aGGGTAACCTTATGCGGCTCTTCGCGA‑CCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGgtg < 2:1154259/150‑1 (MQ=255) | GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGA‑CCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGTG > CP009273/1118357‑1118655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |