| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,673,380 | T→A | 5.7% | S233T (TCA→ACA) | ydgH → | DUF1471 family periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,673,380 | 0 | T | A | 5.7% | 807.0 / 4.0 | 258 | S233T (TCA→ACA) | ydgH | DUF1471 family periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base T (112/126); new base A (9/10); total (122/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
AGAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGCG > CP009273/1673231‑1673529 | agagCCCGGATGTGATCCCGGCAGATTCCGCAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGtcat < 2:3504090/150‑1 (MQ=255)agagCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGtcat > 1:4934077/1‑150 (MQ=255) gCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCaa > 1:1210728/1‑150 (MQ=255) gCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCaa > 1:3738076/1‑150 (MQ=255) cccGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCaaa < 2:5252382/150‑1 (MQ=255) ggATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTTAAACCCAGTCATCAAAAgg > 1:794142/1‑150 (MQ=255) ggATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAGAAgg > 1:4912598/1‑150 (MQ=255) gATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAggc < 1:2631088/150‑1 (MQ=255) aTGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAggcg < 1:1090489/150‑1 (MQ=255) aTGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAggcg < 1:2851076/150‑1 (MQ=255) gATCCCGGCAGAGTCCGAAGCAGGACGTGCAGCTCGGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAggcgggcg < 2:5361232/150‑1 (MQ=255) tCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGtt > 2:2348061/1‑150 (MQ=255) ccGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTac < 1:5405817/150‑1 (MQ=255) cGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTaca < 2:3378181/150‑1 (MQ=255) gCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACAcc > 1:1826355/1‑150 (MQ=255) cAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCg > 1:5379227/1‑150 (MQ=255) aGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGt > 1:3075499/1‑150 (MQ=255) tCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACg > 2:4063147/1‑150 (MQ=255) cGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGTAACCCACTCATCAAAAGGCGGGGGTTACACCGGCACGCt > 1:3274905/1‑150 (MQ=255) cGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCt < 2:2965709/150‑1 (MQ=255) gAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTc > 2:5406513/1‑150 (MQ=255) gAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTc > 2:1285293/1‑150 (MQ=255) aGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTccc < 1:5471885/150‑1 (MQ=255) aCGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATgg < 1:3506477/150‑1 (MQ=255) cGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCACCCGGCTGGc > 1:4350796/1‑150 (MQ=255) tGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCAc > 1:2310852/1‑150 (MQ=255) gCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACt < 2:4731527/150‑1 (MQ=255) cAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCATTGAAACCCACTCATAAAAAGGCGGGCGTTAAACCGTCACGCTCCCCGATGGCACTa > 1:662411/1‑150 (MQ=255) cAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGGTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTa < 2:5179704/150‑1 (MQ=255) ctctGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAg > 2:288726/1‑150 (MQ=255) tGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCg < 1:4709987/150‑1 (MQ=255) tGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCg < 1:2936825/150‑1 (MQ=255) gCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaa < 2:1579350/150‑1 (MQ=255) cTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaag < 2:1004719/150‑1 (MQ=255) gCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaagaa < 1:2868485/150‑1 (MQ=255) gCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaagaa < 1:3462161/150‑1 (MQ=255) tGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGCTGGCACTAAAGTCGAAGAACTGaa > 2:3401550/1‑150 (MQ=255) tGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCACCCGGATGGCACAAAAGTCGAAGAAATGaa > 1:2172829/1‑150 (MQ=255) gCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACa < 2:1400692/150‑1 (MQ=255) gAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAAATGAACaaa > 1:154189/1‑150 (MQ=255) ccGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGa < 2:123454/150‑1 (MQ=255) ccGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGa < 2:3238339/150‑1 (MQ=255) cgcgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGAc < 1:3771539/150‑1 (MQ=255) gcgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGAcc < 2:4403103/150‑1 (MQ=255) gcgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGAcc < 2:2704242/150‑1 (MQ=255) cgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGATGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCg < 2:3486253/150‑1 (MQ=255) cgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACCCGCCCCGATGGCACAAAAGTCGAAGAACAGAACAAAaccaccc > 1:2584043/1‑149 (MQ=255) gaagaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGc > 2:591904/1‑150 (MQ=255) aagaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAATGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCa > 2:4238545/1‑150 (MQ=255) agaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCAAGCTCCCGGATGGCCCTAAAGTCGAAGAACTGAACAAAGCGAACGccg > 2:1114031/1‑148 (MQ=255) aaaGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCg > 2:670010/1‑150 (MQ=255) tgTTGAGAGCCGGGGTGTTGCGACTACCGCATCACCAAGTTCTGATGTGGGTCGCTTATTTTAAACCCAGTCATAAAATGGGGGGCTTTACACCGTCACGCTCCGGGATGGCACTAAAGTCCAATAACTTAACAAAGCGACCGCAGCgat < 1:3610460/149‑1 (MQ=255) ggtGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGGGTTTCCCCGGCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCgatg > 1:1625528/3‑150 (MQ=255) gTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCgatg > 2:4203837/1‑150 (MQ=255) gTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAACAAATGAACAAATCGACCGCAGCgatg > 2:4549802/1‑150 (MQ=255) tGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCgatgat > 2:4001306/1‑150 (MQ=255) tGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAAACCAGTCATAAAAAGGCGGGCGTTAAACCCTCACGCTCCCGGATGGCACTAAAGTAGAAGAACAGAAAAAATAGACCGCAGCgatgat > 1:3856185/1‑150 (MQ=255) gagaTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGatgatg > 2:5434121/1‑150 (MQ=255) gagaTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGatgatg > 2:2580848/1‑150 (MQ=255) gagaTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAAACCAGTCATAAAAAGGCGGGCGGTACACCGTCACGCGCCCCGATGGCCCAAAATTCGAAGAAAAGAACAAATCCACCCCAGCgatgatt > 1:2780105/1‑149 (MQ=255) gagaGCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGATGTGGGTGGCTTCTTTTAAACCCAGTCATAAAAAGGGGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGatgatg < 1:4607534/150‑1 (MQ=255) aTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTc > 2:4530716/1‑150 (MQ=255) cccGGGTGTTGCGACTACCGCAACACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGGGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAACGCGACCGCAGCGATGATGGTccc < 2:2132984/150‑1 (MQ=255) ggggTGTTGCTACTACCGAATCACCATGTTCTTATGTGGGTCGATTATTTTAAACCCACTCAACAAATGGCGGGCGTTACACCGTCACGCTCCCGTATGGAACTAAAGTCCAAGAAATGAACAAAGCGACCGCAGCGATGATGGTCCCGt < 1:1794091/149‑1 (MQ=255) cGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGAGATGATGGTCCCGt > 2:4506264/1‑150 (MQ=255) gggTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTATTTTTAAACCAGTAAAAAAAAAGCGGGCGTTACACCCTCACCCACCCGGGAGGCACTAAAGTAGAAGAACTGAAAAAAACCACCCCAGCGAAGATGGTCCCGtt > 1:1680459/1‑150 (MQ=255) ggTGTTGCTACAACCGAATCACAAAGTTCTGATGTGGGGCGCTTATTTTAAACCCAGTCAAAAAATGGCGGGCGTTACACCGTCACGCCCCGGGATGGCACTAAAGTCCAAGAACTCAACAACGCGACCGCAGCGATGATGGTCCCGTTc < 2:1458396/150‑1 (MQ=255) ggTGTTGCGCCTACCGCATCACAAATTTCTGACGTGGGTCGCTTGTTTGAAACCCAGTCATCAAATGGGGGGCTTTACACCGTCACGCTCCGGGATGGAACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTc < 2:3773293/150‑1 (MQ=255) ggTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTc > 2:1952712/1‑150 (MQ=255) tgtTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGTGTTTGAAACCCAGTAATCAAAAGGCGGGCGTTACACCCTCACGCACCCCGATTGCCCAAAAATCGAAGAACAGAACAAAACGACCCCAGCGAATATTGTACCCTTCGa > 1:5143921/1‑150 (MQ=255) gtTGCTAATACCGAAACACAAAGTTGTGAAGTCGGTCGATTATTTAAAACCCATACATAAAATGGCGGGCTTAACACCGACACGCTCCCGTATGGCAATAAAGTCCAAGAACTTAACAACGCGACCGCAGCGATGATGGTCCCGTTCGAc < 1:1741466/150‑1 (MQ=255) ccGCATCACCATTTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGAAATAAAATGGCGGGCGTTACACCGTCACGCTCCCGGATGGCAATAATGTCGAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAAt < 2:1050458/150‑1 (MQ=255) ccGCATCACCATGTTCTGATGGCGGTCGCTTATTTGAACCCCCGTCAACAAACGGGGGGCGTTACCCCGTCCCGCTCCCGGTTGCAACTAACGTCGAATAACTGAACAACGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAAt < 2:5124674/150‑1 (MQ=255) ccGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAACGTCGACGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAAt < 2:2310852/150‑1 (MQ=255) cGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACCAAGCGACCGCAGCGATGAGGGTCCCGTTCGACAGCATCaaaat > 2:1917898/1‑148 (MQ=255) gCACCACCATTTTCTGATTTCGGTCTCTTATTTGAACCCCTGTAATCAAATGGGGGGCGTTACACCGTCACGCTCCCGGATGGAACTAACGTCTAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATtc < 1:442802/150‑1 (MQ=255) tCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAACAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTctct < 2:356586/150‑1 (MQ=255) cACCAAGTTCTGAAGTCGGTCGCGTCATTGAAACCCAGACAACAAAAGGCGGGCGTTAAACCCTCACGCGCCCGGCTGGCCCAAAACTCGCAGAAATGCACAAAGCGACCCCACCCCGGATGGTCCCGGTAGACAGCCTCaaaatatcag > 2:2774903/1‑143 (MQ=255) aCCAAGTTCTGAAGTCGGTCGCTTCTTTGAAAACCAGTCATCAAAAGGCGGGCGTTACACCCTCACGCTCCCGGATGGCACTAAATTCGAAGAACTGAAAAAAGCGACCGCACCGAATATTGTCCCGGTCGAAAGCATCAAATTCTCTgg > 1:4536164/1‑150 (MQ=255) ccATGTGCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGTTGGCACTAATGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGc < 2:1195018/150‑1 (MQ=255) cttatgtcggtcgATTCTTTCAAACCCAGTCAACAAATGGCGGGGGTTACACCGTCACGCTCCGGTTGGGCACTAACGTCTAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACg < 1:4826308/145‑1 (MQ=255) gAAGTCGGTCGCTTCTTTGAAACCCAGTCAACAAAAGGCGGGCGTTACACCGTCACGCTACCGGATGGCACAAAAGTAGAAGAAAAGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCAACAAATTCTCTTGCAACTACGGc > 1:829383/1‑150 (MQ=255) aGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAAAAAAGCGACCGCAGCGATGATGGTCCCGGTCGACAGCATCAAATTCTCTGGCAACAACGGCaa > 2:803283/1‑150 (MQ=255) cggtcgCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTAGAAGAACTTAACAAAGCGACCGCAGCGATTATGGTCCCGTTAGACAGCATAAAATTCTCTGGCAACTACGGCAACAt > 2:727685/1‑150 (MQ=255) cgtttcttTGAAACCCAGAAATAAAAGGGGGGGCGTTACACCGGCACGCTCCGGGTTGCCAATAAAGTCTAATAACTTAACAACGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGAcc < 1:4239213/147‑1 (MQ=255) cgCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGCCACTAAAGTCGAAGAACTGAACAACGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGAcc < 2:1603109/150‑1 (MQ=255) cgCTTCTTTGAAACCCAGTCAACAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGAcc < 2:897917/150‑1 (MQ=255) ttcttTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGaa < 2:1670710/150‑1 (MQ=255) tcttTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAg < 2:1327273/150‑1 (MQ=255) tatttGAAACCCAGACATAAAATGGCGGGCGTTACACCGTCACGCTCCGGGTTGGCACTAATGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAg < 1:308796/148‑1 (MQ=255) tttGAAACCCCGTCATCAAAAGGCGGGCGGTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACACCGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGtc < 2:1715212/150‑1 (MQ=255) ttGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGtct > 1:1443076/1‑150 (MQ=255) tGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGtctc > 2:4942537/1‑150 (MQ=255) gAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAAATGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTcc < 2:3863913/150‑1 (MQ=255) cccAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATc > 2:4766560/1‑150 (MQ=255) cccAGTCAGCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACCGCATCAAATTCTCTGGCACCTACGGCAACATGACCGACGTCTCCTATc > 2:1174566/1‑150 (MQ=255) ccAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCa > 1:2110769/1‑150 (MQ=255) aGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAATTCTCCTATCAgg > 1:1399302/1‑150 (MQ=255) gtaatcaAACGGCGGGCTTTACACCGTCACGCGCCCGGTTGGCAATAAAGTCTAATAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGt < 1:4473983/147‑1 (MQ=255) tcaAAAGGCGGGCTTTACACCGAAACGATCCCTTATGGCACTAAAGTCTAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGCg < 1:2682501/150‑1 (MQ=255) | AGAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGCG > CP009273/1673231‑1673529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |