| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 191,749 | G→T | 7.3% | L120F (TTG→TTT) | ispU → | undecaprenyl pyrophosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 191,749 | 0 | G | T | 7.3% | 922.6 / 3.2 | 290 | L120F (TTG→TTT) | ispU | undecaprenyl pyrophosphate synthase |
| Reads supporting (aligned to +/- strand): ref base G (116/140); new base T (32/2); total (148/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 294 total aligned reads displayed.
GTAGTGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACCAGA > CP009273/191601‑191898 | agtGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCaa < 1:4047489/150‑1 (MQ=255) gtGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAg < 1:4914594/150‑1 (MQ=255) tGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAACACGCGGTTGCaaca > 1:1573164/1‑148 (MQ=255) cTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTAt < 1:4484535/150‑1 (MQ=255) cTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTAt < 2:1574351/150‑1 (MQ=255) cTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTAGTAGTGGCGATACCAGTCGCGGTAACTCGCGGGTGCAAGACCGGAt > 2:3838240/1‑150 (MQ=255) tGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTAtt < 1:5099885/150‑1 (MQ=255) aaCCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTAGCGTTTGCAAGAACGTATTAGt > 2:3952021/1‑150 (MQ=255) aCCGACCAGCGCAGGAAGTCAGTGCGTTAATGGACCTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAAAGTATTGGTa > 2:4236658/1‑150 (MQ=255) cGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTTAATCGCGTTTTCAAGAAAGTATTAGTaaa > 1:1179551/1‑150 (MQ=255) cGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGGTTGCAAGAACGTATTCGTaaa > 1:3753749/1‑150 (MQ=255) aCCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATc < 1:5026929/150‑1 (MQ=255) aCCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATc < 1:555481/150‑1 (MQ=255) ccAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAAACGCCTTTTGAAGAACCTATTCGTaaaaat > 1:4219585/1‑147 (MQ=255) cAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTg < 1:3354276/150‑1 (MQ=255) cAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCGCGGTTGCAAGAAAGTATTCGTAAATcag > 2:488948/1‑148 (MQ=255) cAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAAAAAGCGTTTGGAAGAACGTATTAGTAAATATg > 1:3914857/1‑150 (MQ=255) aGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTTACAAGCGGTTGCAAGAAAGTATTAGTAAATATGa > 1:1908134/1‑150 (MQ=255) cgcAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAg > 2:5427182/1‑150 (MQ=255) aGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAAAACGCGTTTTCAAGAACGTATTACTAAAAAAGAAgcgc > 1:4297735/1‑150 (MQ=255) tCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAg < 2:2184130/150‑1 (MQ=255) gTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAAATCGCGTTTGCCAGAACGTATTCGTAAATCTGAAGCGCAAACAGCCg > 2:5241717/1‑150 (MQ=255) tGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCgg < 1:4143324/150‑1 (MQ=255) tGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAAACGCCTTTTCAAAAAAGTATTCGTAAATATGAATCGCAAACAccccg > 1:1674578/1‑148 (MQ=255) cGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGTGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCCCGTTTGCAAGAACGTATTAGTAAATCAGAAGCGCTAACAGCCGGGa > 2:3124686/1‑150 (MQ=255) tAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATa < 1:1162048/150‑1 (MQ=255) tAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACACGCGTTTGCAAGAACGTAATCGTAAATCAGAAGCGCTAACAGCCGGGaaaa > 2:4484478/1‑148 (MQ=255) aaTGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATAc < 1:3179425/150‑1 (MQ=255) tGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAAAAGCGTTTGCAAGAACGTATTCGTAAAACTGAAGCGCTAAAAGCCGGGCATACCg > 1:357042/1‑150 (MQ=255) gAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGt < 1:909225/150‑1 (MQ=255) aaCTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTc < 2:1567321/150‑1 (MQ=255) aaCTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCGCGTTTTCAAGAACGTATTCGTAAATCTGAATCGCTAACAGCCGGGAATAACGGTc > 2:2881307/1‑150 (MQ=255) tGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCGCGTTTTCAAGAACGTATTCGTAAATATGAAGCGCTAACAGCCGGGAATACCGGTCTGa > 2:336944/1‑150 (MQ=255) gtgtgGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCGAACAGCCGGGAATACCGGTCTGACGcgg > 2:800144/1‑148 (MQ=255) tgtgGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGa > 2:387239/1‑150 (MQ=255) tgGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTTACTCGCGTTTGCAAGAACGTATTAGTAAATCTGAAGCGCTAACAGCCGGGAATAACCGTCTGTCGCTGAat > 2:154782/1‑150 (MQ=255) ggCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAatat < 2:4188465/150‑1 (MQ=255) ggCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAatat < 2:1422479/150‑1 (MQ=255) gATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAAAGTATTCGTAAATCTGAAGCGCTAACACCCGGGAATAACCGTATGACGCTGAATATTgcggcg > 2:1325068/1‑150 (MQ=255) tAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACACGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTgcggcgca > 2:2589970/1‑148 (MQ=255) aGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCCAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGCATACCGGTCTGACGCTGAATATTGCGGCGAAc > 2:250509/1‑150 (MQ=255) cGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTa < 1:3991657/150‑1 (MQ=255) gAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAAACGCCTGTGGAAGAACCTATTCGTTAATCTGAATCGCGAACAGCCCGGAATACCCGTCTGACGCAGAAAATTGCGGCGCACAAc > 2:747730/1‑150 (MQ=255) aGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACGCGCGTTTGCAAGAACGTATTCGGAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCAGAATATTGCGGCGAACTACgg > 2:4558538/1‑150 (MQ=255) gTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGt < 1:1274195/150‑1 (MQ=255) tAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGGATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTg > 2:4383452/1‑150 (MQ=255) aaaaaGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTgg < 2:117644/150‑1 (MQ=255) aaaaaGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTAGGAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGAAGCTGAATATTGCGGCGAACTACGGTgg > 2:872727/1‑150 (MQ=255) aaaaGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGa < 1:76412/150‑1 (MQ=255) aaaGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGAc < 2:3699960/150‑1 (MQ=255) aaGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTTACGCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACAACGGGGGTCg > 2:2094138/1‑150 (MQ=255) gTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGtt < 1:4695298/150‑1 (MQ=255) tCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTg < 2:1670768/150‑1 (MQ=255) tCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTg < 2:948319/150‑1 (MQ=255) tGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTggg < 1:5241717/150‑1 (MQ=255) tGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGGTTGCAAGAAAGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGTCGCTGAATATTTCGGCGAACTACGGTGGACGTTggg > 2:2408560/1‑150 (MQ=255) tGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACACGCGGTTGCAAGAACCTATTCGTAAATATGAATCGCAAACAGCCGGGGAAACCGGTCTGACGCTGAAAATTGCGGCGGACAACGGTGGGCGTTggg > 1:5058301/1‑150 (MQ=255) tGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAAAAGCGTTTTCAAGAAAGTATTCGTAAATCTTAATCGCAAAAATCCGGGAATAACGGTCTGACGCTGAATATTTAGGCGAACTAAGGTGGACGTTtgg > 1:2297812/1‑150 (MQ=255) cACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTAGTAAATCTGAAGCGCTAACAGCCGGGAAAACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGat > 2:1837971/1‑150 (MQ=255) gACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATAGCGGTTGCAAGAACGTAATAGGAAATCAGAATCCCAAACAGCCGGGAATACCGGTCTGACGCAGAATATTTCGGCGAACAACGGTGGACGTTTGGGtatat > 1:5508096/1‑149 (MQ=255) gACATAACGTGCGTCTGCGTATTAGTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATAGTGCGGCGAACTACGGTGGACGTTGGGATATAg < 2:3903785/150‑1 (MQ=255) cATAACGTGCGTCTGCGTAGTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTc < 1:1948834/150‑1 (MQ=255) aTAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTTACTCGCGGTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAAAACCGGTCTGACGCGGAATAGTGCGGCGAACTACGGTGGACCTTTGGATATAGTcc > 2:2314597/1‑150 (MQ=255) aTAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCGCGTTTGCAAGAACGTATTCGTAAATCTGAATCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTTCGGCGAACTACGGTGGTCGGTGGGGTATAGTcc > 2:1710970/1‑150 (MQ=255) aTAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATAGCGTTTGGAAGAAAGTATTCGTAAATATGAAGCGCTAACAGCCGGGAAAAACGGGCTGACGCGGTATATTGCGGCGAAATAAGGTGGGCGTTGGGATATAGtac > 1:3599605/1‑148 (MQ=255) aTAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAAATCGCGGTTGCAATAACCTAATGGGAAATCTGTAGCGCGAAAAACCCGGCATACCGGTCTGACGCAGAATATTGCGGCGAACAACGGTGGCCGGTGGGAtatattac > 2:5173250/1‑146 (MQ=255) aTAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCGTTAAAACGCGGTTTCAAGAAAGGATTCGTAAAAAAGAAGCGCTAACACCCCGGCAAAACGGTCTGACGCTGTATATTGCGGCGAACAAACGTGGGCGGTTGGGTATAGTcc > 1:3547086/1‑150 (MQ=255) aaCGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAg < 2:401779/150‑1 (MQ=255) aaCGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAg < 1:3219741/150‑1 (MQ=255) aaCGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAAATCGCGTTTTCAAGAACGTATTCGTAAATCTGAATCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTTCGGCGAACTACGGTGGACGTTGGGATATAGTCCAg > 2:104522/1‑150 (MQ=255) cGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAggg < 1:2203032/150‑1 (MQ=255) gTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGa < 1:4662773/150‑1 (MQ=255) cGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTc < 2:2018465/150‑1 (MQ=255) cTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAgg < 2:59203/150‑1 (MQ=255) tGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGc < 1:4655678/150‑1 (MQ=255) attattGGCGATACCAGTCGCTTTTACTCGCGTTTGCAAGAACGTATTCGTAAATATGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTg > 2:2249011/1‑150 (MQ=255) attattGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTg < 2:2821007/150‑1 (MQ=255) tGGCGATACCAGTCGCTTTAACTCGCGGTTGCAAGAACGTATTCGTAAATATGAAGCGCTAAACGCCGGGAAAACCCGTCTTTCGCTGAATAATGCGGCGCACTACGGTGGACGGTGGGATATAGTCCACGGAGTAAGGCAACGGGCTGa > 2:1641036/1‑150 (MQ=255) tGGCGATACCAGTCGCTTTAAATCGCGTTTGCCAGAACGTATTCGTAAATCTGAAGCGCGAACAGCCGGGGATACCGGTCTGACGCGGAATATTGCGGCGAACAACGGTGGACGTTGGGCTATAGTCCAGGGAGTCAGGCAACAGGCTGa > 2:4406914/1‑150 (MQ=255) agaCCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAgg < 2:1602962/148‑1 (MQ=255) cAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTgca < 1:1078353/150‑1 (MQ=255) aGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTgcag > 2:4945008/1‑150 (MQ=255) gCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAg > 1:2635920/1‑150 (MQ=255) gCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAg < 2:4594080/150‑1 (MQ=255) cTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAgg < 2:3137909/150‑1 (MQ=255) cTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAgg < 2:4391043/150‑1 (MQ=255) tttAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGa < 1:2229108/150‑1 (MQ=255) tAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGaaa < 1:2835869/150‑1 (MQ=255) tAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGaaa > 1:1530785/1‑150 (MQ=255) aCTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAAcc > 1:4267241/1‑150 (MQ=255) cTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCt < 1:4555493/150‑1 (MQ=255) cTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCt < 2:3464458/150‑1 (MQ=255) cTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCt > 2:2726158/1‑150 (MQ=255) tCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTg > 2:3616522/1‑150 (MQ=255) cgcgTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGc < 2:2762503/150‑1 (MQ=255) cgcgTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGc < 1:136159/150‑1 (MQ=255) cgTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCaa < 2:467298/150‑1 (MQ=255) ttGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACca > 1:2734105/1‑150 (MQ=255) gCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACcaga > 1:3680638/1‑150 (MQ=255) gCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACcaga > 1:5334550/1‑150 (MQ=255) | GTAGTGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACCAGA > CP009273/191601‑191898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |