Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,010 G→T 11.0% L72I (CTT→ATT)  ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0100GT11.0% 415.7 / 3.4 170L72I (CTT→ATT) ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (76/65);  new base T (5/23);  total (82/88)
Fisher's exact test for biased strand distribution p-value = 6.95e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 194 total aligned reads displayed.

AGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAG  >  CP009273/234861‑235159
                                                                                                                                                     |                                                                                                                                                     
aGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATCgtaag                                                                                                                                                       >  2:299/1‑150 (MQ=255)
   aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGGATGATTTTATTATCgtaagtaa                                                                                                                                                    <  2:2482171/150‑1 (MQ=255)
        cATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTa                                                                                                                                               <  2:969380/150‑1 (MQ=255)
        cATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTa                                                                                                                                               <  1:3050787/150‑1 (MQ=255)
         atatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAc                                                                                                                                              <  1:2649239/150‑1 (MQ=255)
          tatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATCGTAAGTAAAATTACa                                                                                                                                             >  1:3193793/1‑150 (MQ=255)
          tatCCTGTGACAAAAGGAGCTATTAAAGGTGATATTACGATAGCTATTAGTAAAAATATAAGCGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACa                                                                                                                                             <  2:1602649/150‑1 (MQ=255)
           atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATCGTAAGTAAAATTAAAt                                                                                                                                            >  1:5389559/1‑150 (MQ=255)
           atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                            <  1:2776310/150‑1 (MQ=255)
           atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACaa                                                                                                                                            >  1:1874338/1‑149 (MQ=255)
            tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATg                                                                                                                                           <  2:3240756/150‑1 (MQ=255)
            tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATg                                                                                                                                           <  2:3574042/150‑1 (MQ=255)
                gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAata                                                                                                                                       <  2:413383/150‑1 (MQ=255)
                 tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAACTACATGAatat                                                                                                                                      <  1:4324972/150‑1 (MQ=255)
                 tgACAAAACGAGCTATTAAAGGAGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAatat                                                                                                                                      <  2:3108144/150‑1 (MQ=255)
                 tgACAAAACCAGCTATAAAAGGTGATATTACGATAGCTATTATAAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAatat                                                                                                                                      <  2:3108368/150‑1 (MQ=255)
                    cAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTa                                                                                                                                   >  2:3332459/1‑150 (MQ=255)
                       aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaaa                                                                                                                                <  1:4350541/150‑1 (MQ=255)
                       aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaaa                                                                                                                                <  1:4350528/150‑1 (MQ=255)
                       aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaaa                                                                                                                                <  1:4350410/150‑1 (MQ=255)
                         ggAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAg                                                                                                                              >  2:4607648/1‑150 (MQ=255)
                            gCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                           <  1:1006856/150‑1 (MQ=255)
                             cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                          >  2:3936979/1‑150 (MQ=255)
                               aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAc                                                                                                                        <  1:3288510/150‑1 (MQ=255)
                                  aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGTTTTTATTATAGTAAGTAAAATTAAATGTATATTTAAAAATGAAAACgtc                                                                                                                     >  1:4048734/1‑148 (MQ=255)
                                  aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                                     <  2:2659397/150‑1 (MQ=255)
                                   aaGGTGCTATTACGATAGCTATTAGTAACAATATAAGCTTTAGCTTTTTTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCTTAAGTAAATTTACATGAATATTTAAAAAGTAAAACGACa                                                                                                                    <  2:2944874/150‑1 (MQ=255)
                                          tATTACTATATCTATTTGTAAAAATATAAGATTTAGCTGTTTTTTTATGTCTTTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAAcc                                                                                                             <  2:2631486/150‑1 (MQ=255)
                                          tATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAAATATTTTAAAATAGTAATTAAAAATAAAAGAAAAATTAAAAAGGAAAACGACATGAAAcc                                                                                                             >  1:2759248/1‑150 (MQ=255)
                                          tATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAcc                                                                                                             >  2:2059867/1‑150 (MQ=255)
                                           aTTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAATGAAAACGACATGAAACCg                                                                                                            >  1:1766813/1‑150 (MQ=255)
                                             aactaTAGATATTATTAAAAATATAATAGTTAGTTGTTTTGTTATTTCTTTGGCTAATTTCAATACATTCTTTTTTTTTATTAATAATTATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGaa                                                                                                          <  2:4953962/146‑1 (MQ=255)
                                                gATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGca                                                                                                       >  2:1154181/1‑150 (MQ=255)
                                                gATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGca                                                                                                       >  2:1893462/1‑150 (MQ=255)
                                                gATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATAGTAAGTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGcc                                                                                                       >  2:3039719/1‑149 (MQ=255)
                                                 aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGTATGATTTTATTATCGTAAGTAAAATTTAATGAATATTTAAAAATGAAAACGCCATGAAACCGAAGcac                                                                                                      >  1:151986/1‑150 (MQ=255)
                                                 aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGTTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAATGGAAAACGACATGAAACCGAAGcac                                                                                                      >  2:199681/1‑150 (MQ=255)
                                                 aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGcac                                                                                                      >  2:4210422/1‑150 (MQ=255)
                                                   aGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATCGTAATTAAAATTACATGAATATTTAAAAATGAAAACGACATGAAACCGAAGCACAg                                                                                                    >  1:4586867/1‑150 (MQ=255)
                                                      tattatTAAAAATATAAGTGTTATCTGTATTTTTTTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAAt                                                                                                 <  2:3587187/150‑1 (MQ=255)
                                                      tATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACCTGAAACCGAAGCACCGAAt                                                                                                 >  2:3163634/1‑150 (MQ=255)
                                                      tATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATGAAGAAAGAATTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACCTGAAACCCAAGCACACaaa                                                                                                 >  2:1929725/1‑149 (MQ=255)
                                                          tttAAAAATTTATGTGTTTGGTTTTTTGTTTGGTGTGGGGCTAATTTGACTACCTTGTTTTTTTTTTTTATTATTTTTTTTTTTATGTTAATTAAATTTAATTTATTATTTAAATTGTAAAACGACATGAAACCGAAGCACAGAATCAAc                                                                                             <  1:2805492/148‑1 (MQ=255)
                                                             aaaaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACAAGAATATTTAAAAAGGAAAACCACATGAAACCGAAGCACACAATCAACaat                                                                                          >  1:2127679/1‑148 (MQ=255)
                                                             aaaaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATTAATATTTAAAAATGAAAACGACATTAAACCGAAGCACAGAAACAACAtt                                                                                          >  2:2358269/1‑150 (MQ=255)
                                                                 atatAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAAATATTTTATTATAGTAAGTAAAATTAAATTAAAATTTAAAAATTAAAAAGAAATGAAAACGAACCACACAATAAAAAATCTcc                                                                                      >  1:1163778/1‑150 (MQ=255)
                                                                 atatAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATTATTTTATTATCGTATGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTcc                                                                                      <  2:1362295/150‑1 (MQ=255)
                                                                 atatAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATAAACATTCTcc                                                                                      >  2:3620575/1‑150 (MQ=255)
                                                                    taAGATTTAGCTGTATTGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTTATTAATAATTATTTTTTTATCGTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAAt                                                                                   <  2:4794142/150‑1 (MQ=255)
                                                                     aaGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAAACCAAGCACAGAATCAACAATAACCAATc                                                                                  >  1:3524507/1‑150 (MQ=255)
                                                                        tgTTAGCTTTTTTGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGATTAATAATGATTTTTTTATCGTAAGTAAAATTACATTAATATTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATa                                                                               <  2:2151792/149‑1 (MQ=255)
                                                                        agTTAGCTGTATTGTTATGTCTGGGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATa                                                                               <  2:2152685/150‑1 (MQ=255)
                                                                          ttcgCTTTATTGTTTTGTGGGTGGACAAATTGACAAACTTCTTTTTTTTGTTTAATATTTTTTTTTTTTTCTTAATTAAAATAAAATTAATATTAAAAATGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaaa                                                                             <  1:1460454/147‑1 (MQ=255)
                                                                           tAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATAAACATTCTACAATCATaaaa                                                                            >  2:654602/1‑150 (MQ=255)
                                                                               tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAAACATAAAATAtt                                                                        >  2:771246/1‑150 (MQ=255)
                                                                                gTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGAAAACGACATGAAACCGAAGCACAGAATAAACATTCTGCAATCATAAAATAttt                                                                       >  2:4020146/1‑150 (MQ=255)
                                                                                   ttGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCg                                                                    >  2:2069366/1‑150 (MQ=255)
                                                                                      ttATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAAGACATGAAAACGAAGCACAGAATCAACAATCTCAAATAATAAAATATTTACGTgg                                                                 >  2:1495962/1‑150 (MQ=255)
                                                                                       tttgtgtgtgGCTAATTTGACTACCTTTTTTTTTTTGATTAATAATGTTTTTATTATGTTAATTAAAATTACATTAATATTTAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGa                                                                <  1:655931/148‑1 (MQ=255)
                                                                                       tATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAAAATTATTTTATTATCGTAAGTAAAATTAAAATAATATTTAAAAAGGAAAACGAAATTAAAACCAAGCACAGAAAAAAAAATATACAATAAAAAAATATTTCCGTggt                                                                >  1:3760056/1‑149 (MQ=255)
                                                                                        aTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAATTATTTTATTATAGTAAGTAAAATTAAAATAATATTTAAAAAAGAAAACGACATGAAAACCAAGCACACAATCAACAATATACAAAAATAAAATATTTACGTGGAg                                                               >  1:4742927/1‑150 (MQ=255)
                                                                                               tgGCGAAATTGACTACCTTGGTTTTTTTGATTAAGAATTATTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTtta                                                        <  1:843789/150‑1 (MQ=255)
                                                                                               tgGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAATTAAAATTACATGAATATTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTtta                                                        <  1:4115299/150‑1 (MQ=255)
                                                                                                ggCGAAATTGACTACCTTCGTTTTTTTTTTTAATAAATATTTTATTATAGTAAGTTAAATTAAATGAAAATTTAAAAATGAAAAACACATGAAAACCAATCACACAATAAACAATATACAAACAAAAAATAATTACGTGGGGCATTttat                                                       >  1:527689/1‑150 (MQ=255)
                                                                                                  cGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttatta                                                     <  2:1240821/150‑1 (MQ=255)
                                                                                                   gAAATTGACTACCTTCGTTTTTTTGTTTTATTATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGTAAACGACATAAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAAAATTTACGTGGCGCATTTtattat                                                    >  2:5237097/1‑150 (MQ=255)
                                                                                                    aaaTTTACTACATTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTattatt                                                   <  2:612335/150‑1 (MQ=255)
                                                                                                          accaCCTTCTTTTTTTTTATAAATAATTATTTTATTATATTATTAAAAATTAAATTAAAATTAAAAAAGGAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                             <  1:4211722/147‑1 (MQ=255)
                                                                                                          aCTACCTTCTTTTTTTTTATTAAGAATTATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                             <  1:2857199/150‑1 (MQ=255)
                                                                                                            tcccTTCTTTTTTTTGATTAAGAATGATTTTTTTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATag                                           <  2:4549153/148‑1 (MQ=255)
                                                                                                            tACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATag                                           <  2:1783566/150‑1 (MQ=255)
                                                                                                             aCCTTCGTTTTTTTGATTAAAAAATAATTTATTATAGTAACTAAAAATAAAATAATATTTAAAAATGAAAAAGACAAGAAACCCAAGAACAGAATAAAAAATATACAATAAAAAAAAAATTCAGTGGATCAATTTATTATTTAAaatata                                          >  2:2909100/1‑148 (MQ=255)
                                                                                                              ccTTCTTTTTTTTTATTAAGATTGATTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATagag                                         <  1:4852862/150‑1 (MQ=255)
                                                                                                                  cttttttttGATTAAGAATTATTTTTTTATCGTATGTAAAATTAAATGAATATTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                     <  1:5507988/148‑1 (MQ=255)
                                                                                                                      tttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACt                                 >  1:3643650/1‑150 (MQ=255)
                                                                                                                         tttaTTAATATTTATTTTATTATCTTAATAAAATTTAAATTAATATTAAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                              <  1:104615/147‑1 (MQ=255)
                                                                                                                          tGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCgg                             >  2:525549/1‑150 (MQ=255)
                                                                                                                            aTTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                           >  2:4564783/1‑150 (MQ=255)
                                                                                                                             ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaa                          >  1:1051700/1‑150 (MQ=255)
                                                                                                                              tAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaa                         >  2:514655/1‑150 (MQ=255)
                                                                                                                               aaGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaa                        >  1:3093512/1‑150 (MQ=255)
                                                                                                                                  atttaTTTTATTATCTTAATAAAAATAACATTAATATATAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc                     <  1:4896205/146‑1 (MQ=255)
                                                                                                                                   aTGATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATTATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACa                    <  2:896568/150‑1 (MQ=255)
                                                                                                                                   aTGATTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACa                    <  2:1564556/150‑1 (MQ=255)
                                                                                                                                      tttttATTATCTTAAGTAAATTTAAATTAATTTTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag                 <  1:2146140/149‑1 (MQ=255)
                                                                                                                                      aTTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag                 <  2:885832/150‑1 (MQ=255)
                                                                                                                                      aTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag                 >  2:1850685/1‑150 (MQ=255)
                                                                                                                                           attatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa            >  2:375286/1‑150 (MQ=255)
                                                                                                                                            ttatCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAt           <  2:797853/150‑1 (MQ=255)
                                                                                                                                             tatCTTAATTAAATTTACTTTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACATAATCTACATTATCCAATCATAAAATATTTCCGTGGAGCTTTTTATTATTGAATTTATAGGTTTAACTCCGGTAAAAAACAAAGATGCAtt          <  2:266789/150‑1 (MQ=255)
                                                                                                                                             tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAtt          >  2:4726747/1‑150 (MQ=255)
                                                                                                                                             tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAtt          >  2:3647128/1‑150 (MQ=255)
                                                                                                                                                cttaagaaaAATTACAAGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGaa       <  2:4372323/148‑1 (MQ=255)
                                                                                                                                                 gtaagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGact      >  1:3493313/1‑148 (MQ=255)
                                                                                                                                                   aagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGc    >  2:5402088/1‑150 (MQ=255)
                                                                                                                                                    agtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCa   >  2:594200/1‑150 (MQ=255)
                                                                                                                                                    agtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCa   >  2:2462084/1‑150 (MQ=255)
                                                                                                                                                    agtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCa   >  1:519554/1‑150 (MQ=255)
                                                                                                                                                     gtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg  >  1:1111822/1‑150 (MQ=255)
                                                                                                                                                     gtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg  <  2:4274939/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAG  >  CP009273/234861‑235159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: