Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,822,340 A→C 13.7% Q12H (CAA→CAC) ‡ xanP → xanthine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,822,3400AC13.7% 618.4 / 20.7 282Q12H (CAA→CAC) ‡xanPxanthine permease
Reads supporting (aligned to +/- strand):  ref base A (177/59);  new base C (8/38);  total (185/97)
Fisher's exact test for biased strand distribution p-value = 2.16e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 283 total aligned reads displayed.

TATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822192‑3822488
                                                                                                                                                    |                                                                                                                                                    
tataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAc                                                                                                                                                     >  2:5105356/1‑150 (MQ=255)
 ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    >  1:1240892/1‑150 (MQ=255)
 ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    <  1:902143/150‑1 (MQ=255)
  taAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCg                                                                                                                                                   <  2:4232169/150‑1 (MQ=255)
   aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGACAATGCGCAACCgg                                                                                                                                                  >  2:1287865/1‑150 (MQ=255)
    aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGt                                                                                                                                                 >  2:2265360/1‑150 (MQ=255)
       aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgc                                                                                                                                              <  1:944637/150‑1 (MQ=255)
        aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTgcg                                                                                                                                             >  2:2703989/1‑150 (MQ=255)
           gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAg                                                                                                                                          <  2:1275785/150‑1 (MQ=255)
             aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGGTGCGCCGAc                                                                                                                                        >  1:3030283/1‑150 (MQ=255)
             aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGAc                                                                                                                                        >  2:4093524/1‑150 (MQ=255)
             aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGAc                                                                                                                                        >  1:1573330/1‑150 (MQ=255)
                tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCa                                                                                                                                     >  2:5219741/1‑150 (MQ=255)
                tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACTCa                                                                                                                                     >  1:3865527/1‑150 (MQ=255)
                  tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCaaa                                                                                                                                   >  2:2762264/1‑150 (MQ=255)
                  tatcATTTAAATATTTAGATGAGTATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCaaa                                                                                                                                   <  2:3759056/148‑1 (MQ=255)
                     cATTTAAATATTTAGTTGAGGTTGTGGCAAACGTTTGCTTTTCTCTTGCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACa                                                                                                                                <  2:312644/150‑1 (MQ=255)
                      aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAg                                                                                                                               >  2:2055450/1‑150 (MQ=255)
                       tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACTCAAAACacc                                                                                                                              >  1:4994581/1‑148 (MQ=255)
                         tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACACAAAACACCGa                                                                                                                            >  1:3876333/1‑150 (MQ=255)
                         tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGa                                                                                                                            >  2:5347332/1‑150 (MQ=255)
                         tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGa                                                                                                                            >  2:2431091/1‑150 (MQ=255)
                           aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAAc                                                                                                                          >  2:851602/1‑150 (MQ=255)
                           aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTTCGCACAAACAAAAAAGCGAAc                                                                                                                          >  1:1837850/1‑150 (MQ=255)
                           aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTGTCGCAGACTCAAAACAGCGAAc                                                                                                                          >  2:415058/1‑150 (MQ=255)
                            atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGGGCAGAAACAAAAAAACGaaaa                                                                                                                         >  1:1670215/1‑148 (MQ=255)
                            atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGAGCAGACACAAAACaaccaaaa                                                                                                                         >  1:2870796/1‑143 (MQ=255)
                             tatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGAGCAACCGGTTGCGCCGAAACAAAAAAACGaaaat                                                                                                                        >  1:5154915/1‑147 (MQ=255)
                              atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTgg                                                                                                                       >  1:4917978/1‑149 (MQ=255)
                                      gtggAGGTGGAAAACTTTTGCTTTTCGCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGt                                                                                                               <  2:3410492/148‑1 (MQ=255)
                                      gAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTTCGCAGACAACAAAAAGCCAACAGATTTaaccg                                                                                                               >  1:3367947/1‑146 (MQ=255)
                                       aGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCCGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTGTCGCTGTCTGTTTCCACCCTCGAGTCTGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTc                                                                                                              <  2:2519996/150‑1 (MQ=255)
                                       aGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTc                                                                                                              >  2:1081762/1‑150 (MQ=255)
                                        ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCt                                                                                                             >  2:4743693/1‑150 (MQ=255)
                                         gttgtgGAAATCGTTTGCTTTTCTCTTTCGGTCAGATAAAATGCCCGCTTTGCTACCAGGGTTTTGTTTTCGATGTCTGTTTCCACCCTCGAGACAGAAATTGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCtt                                                                                                            <  1:2767655/148‑1 (MQ=255)
                                         gATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCtt                                                                                                            >  2:4458938/1‑150 (MQ=255)
                                           tgtgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGAGCAGACTCAAAAAAGCGAACAGATTTACACTCTTGa                                                                                                          >  1:677221/1‑150 (MQ=255)
                                               gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACAGACTTGAatat                                                                                                      >  2:538366/1‑150 (MQ=255)
                                                cAACCGTTTGCTTTTATCTTTCGGTCAGATAAAAGGCCCGCTTTGCTACCAGGGTATTTTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATc                                                                                                     <  1:3615013/150‑1 (MQ=255)
                                                 aaaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCg                                                                                                    >  2:5019613/1‑150 (MQ=255)
                                                  aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTTCGCAGACGCAAAAAAGCGAACTGATTTAACGTATTTAAGATAGt                                                                                                   >  1:35068/1‑150 (MQ=255)
                                                     gTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                                >  2:3668363/1‑150 (MQ=255)
                                                     gTTTGCTTTTCTCTTGCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                                <  2:233823/150‑1 (MQ=255)
                                                        tGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCCCAGACTCAAAACACCGAACAGATTTAACCTCTTGAAGATCGTccgccc                                                                                             >  1:3488151/1‑149 (MQ=255)
                                                          cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCt                                                                                           >  2:567185/1‑150 (MQ=255)
                                                          cTTTTCTCTGTCGGTCAGCTAAACTGCCCGCTTGGCTACCACGGGATTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCt                                                                                           <  2:2411414/150‑1 (MQ=255)
                                                           ttttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAACAGCGCACTGATTTACCGTCTTGAAGATCGTCCGCCGCtt                                                                                          >  1:5026973/1‑150 (MQ=255)
                                                            tgtcgcgttCGGTCAGCTAAAATGCCCGCTTGGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                         <  2:3876165/143‑1 (MQ=255)
                                                              tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTTCGCAGACTCAAAACAGCGTACAGATTTTACCTCTTTAAGATCGTCCGCCGCGTCCt                                                                                       >  1:2789179/1‑150 (MQ=255)
                                                               ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGTACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTc                                                                                      >  1:3148516/1‑150 (MQ=255)
                                                               ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGTATATAGTCCGCCGCTTCCtg                                                                                      >  1:2951930/1‑149 (MQ=255)
                                                               ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGGTGCGCCGACACAAAAAAGCGAACAGATTTAACGTCATTAATATAGTCCGCCCCGTccac                                                                                      >  1:2145723/1‑148 (MQ=255)
                                                                tgtttCGGTCAGCTAAAATGCCCGCTTTGATACCACGGGATTGTTTTCGTTGCCTGTTTCCACCCTCGAGTCAGAAATTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCa                                                                                     <  2:943230/148‑1 (MQ=255)
                                                                       gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcccag                                                                              >  1:133399/1‑148 (MQ=255)
                                                                       gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                              >  2:1850005/1‑150 (MQ=255)
                                                                          aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTTCGCAGAATCAAAACAGCGAACTGATTTAACGTCTTTAAGATCGTCCGCCGCGTCCTCAAAACCAGttt                                                                           >  1:2417409/1‑150 (MQ=255)
                                                                             tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTGCGCCGACACAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCGTCCGCAAAACCGGTTTgcc                                                                        >  1:4822410/1‑150 (MQ=255)
                                                                             tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAAACCTGTTTgcc                                                                        >  1:1521738/1‑150 (MQ=255)
                                                                              aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGGTGCGCAGACACAAAACAACGAACAGAGTTAACCTCATGAAGAACGTCCGCCGCAGCCACAAAACCAGTTTgccg                                                                       >  1:2829155/1‑150 (MQ=255)
                                                                              aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccg                                                                       >  2:4259039/1‑150 (MQ=255)
                                                                              aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCGCCAACCCGGTTTgccg                                                                       >  2:4320734/1‑150 (MQ=255)
                                                                                 aTGCCCGCTGTGCTACCCCGGGCGTGGTGGCGAGGTCTGTGTCCACCCTCGAGGCAGACAATGCGCAACCGGTTGCGCAGACTCTAAACCGCGAGCTGCGGTCCCGGCTTGCAGCTCGTCCGCCGCGGCCTCAAACCCGGTGTgccgccg                                                                    >  2:1450051/1‑149 (MQ=255)
                                                                                  tGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                                   >  2:2988498/1‑150 (MQ=255)
                                                                                     ccGCTTTGCTACCACGGTATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCa                                                                <  2:1604665/150‑1 (MQ=255)
                                                                                       gCTTTGCTACCCCGGTTTTTTTTTCGTTTTCTTTTCCCACCCTCGAGACACAAAATGCGCAACCGGTTGCGCAGACTCAACACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGc                                                              <  1:1679822/150‑1 (MQ=255)
                                                                                        cTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTACGCCGCTTCCTCAAAACCTGTTTGCCGCCTGTCAGCa                                                             >  2:5275360/1‑150 (MQ=255)
                                                                                         tttGCTACCACGGGATTGTTTTCGTTGTCTGTGTCCACCCTCGAGTCAGAAAAGGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCAt                                                            <  2:4003414/150‑1 (MQ=255)
                                                                                          ttGCTACCACGGGAGTGTTTTCGATGTCTGGTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGCACTGATTTACCGTCGTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGGCGCCTGTCAGCATc                                                           >  2:2911561/1‑150 (MQ=255)
                                                                                           tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                          <  2:1937998/150‑1 (MQ=255)
                                                                                              tACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAACAGCGAAATGATTTAACGTCTTGAAGATCGTCCGCCGCGTCCACAAACCCTGTTTGCCGCCGGTCAGCAAatgct                                                       >  1:2283064/1‑150 (MQ=255)
                                                                                               aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                      >  2:2660223/1‑150 (MQ=255)
                                                                                               aCCACGGGAGTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                      <  2:4206072/150‑1 (MQ=255)
                                                                                                ccAGGGGTTTTTTTTGGAGGTTGGTTACCCCCCTCGAGACAGAAACTGCGCACCGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTgg                                                     <  1:4766525/150‑1 (MQ=255)
                                                                                                    gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                 >  2:1700427/1‑150 (MQ=255)
                                                                                                    gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACACCGAACTGATTTACCGTCTTGAATATCGTCCGCCGCTTCCTCAAACCCAGTTTGCCGCCTGTCAGCATCTGCGGGCGAt                                                 >  1:3074163/1‑150 (MQ=255)
                                                                                                     ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATg                                                >  2:2861087/1‑150 (MQ=255)
                                                                                                     ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACACAAAAAAGCGAACAGATTTACCGTCATGAAGATCGTCCGCCCCGTCCGCAAAACCGGGTTGGCGCCGGTCAGCAACATCTGGCgcag                                                >  1:5378485/1‑147 (MQ=255)
                                                                                                      ttttGTTTTCGATGTCTGTTACCACCCTCGAGTCAGAAAATGCGCAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                               <  1:5404513/148‑1 (MQ=255)
                                                                                                      gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCCGACTCAAAAAACCGAACAGATTTACCCTCTTGAATATAGTCCCCCCCGTCCACAAACCCAGTTTTCCGCCAGTCAGCAAAAGCTGGCGATGt                                               >  1:2296609/1‑150 (MQ=255)
                                                                                                       aTTGTTTTCGATGTCTGTTTCCACCCGCGAGTCAGAAATTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGtt                                              <  2:737553/150‑1 (MQ=255)
                                                                                                         tGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTTCGCAGACAAAAAACAGAGAACTGATTTACAGGCATGAAGATCGTCCGCCGCTTCCTCAAAACCAGTTTTGCGCCTGTCAGCATCAGCTGGCGATGTTCg                                            >  1:439635/1‑150 (MQ=255)
                                                                                                           ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCCGACTCAAAAAAGCGAACTGAATTAACGTCTTTAAGATCGGCCGCCGCGTCCTCAAACCCAGGTTGCCGCCAGGCAGCATCTGAGGGCGAAGTTCGtt                                          >  1:3296356/1‑150 (MQ=255)
                                                                                                              tCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCg                                       <  2:4949040/150‑1 (MQ=255)
                                                                                                               cGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACAAAAAACAACGAAATGATTTACCGGCTTGAAGATCGGCCCCCGCGTCCTACAACCCAGTTTGGCGCCATACAGCAAAAGCTGGCGCAGGTCGTTGCgg                                      >  1:4034500/1‑150 (MQ=255)
                                                                                                                  tGTCTGTTTCCACCCGCGAGTCAGAAAATGCGCACCGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGa                                   <  2:3454850/150‑1 (MQ=255)
                                                                                                                     cTGTTACCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCa                                <  1:5328009/150‑1 (MQ=255)
                                                                                                                      tGTTACCACCCTCTATTCATAAAATGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                               <  1:2055450/150‑1 (MQ=255)
                                                                                                                       gTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAACACCGAACAGATTTAAAGGCTTTAAGATAGTCCGCCCCGTCCTCAAAACCAGTTTTGCGCCAGTCAGCATCTGCTGGCGATGTTAGTTGCGGTGATAACg                              >  1:4872620/1‑150 (MQ=255)
                                                                                                                        tttCCACCCTCGAGTCATAAAATGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                             <  1:1007515/150‑1 (MQ=255)
                                                                                                                        tttCCACCCTCGAGTCACAAAATGCGCACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                             <  1:1007437/150‑1 (MQ=255)
                                                                                                                           ccccccTCGAGTCATAAATGGCGCACCGGGGTCCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAg                          <  1:4266068/147‑1 (MQ=255)
                                                                                                                             aCCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCCGCATCTGCTGGCGATGTTCGTTGCGGTGCTCACGCCAgcg                        >  2:5519732/1‑150 (MQ=255)
                                                                                                                                     gTCAGAAAATGCGCAACCCGTTGCGCAGACACAAAACAGCGAACTGATTTACCGTCGTTAAGATCGTCCGCCGCGTCCTCAAAACCAGTTTGCCGCCAGTCAGCAACTGCTGGCGATGTTCGTTGCGGTGATCACGCCACCGCTATTaaa                >  1:3422634/1‑149 (MQ=255)
                                                                                                                                       cAGAAAAGGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt              <  1:3752538/150‑1 (MQ=255)
                                                                                                                                          aaaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc           >  2:5497731/1‑150 (MQ=255)
                                                                                                                                          aaaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc           <  2:3293954/150‑1 (MQ=255)
                                                                                                                                            actGCGCAACCGGTTGCGCAGACTCAAAACCGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTGCGTTGCGGTGATCACGCCAGCGCTATTCATCGGcccg         >  2:4017380/3‑148 (MQ=255)
                                                                                                                                                 gcACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt    <  2:21967/150‑1 (MQ=255)
                                                                                                                                                 gcAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt    <  2:5474081/150‑1 (MQ=255)
                                                                                                                                                   aaCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg  >  2:1131406/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822192‑3822488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑