| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,981,521:1 | +A | 17.3% | intergenic (‑81/‑182) | azuC ← / → yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,981,521 | 1 | . | A | 17.3% | 575.2 / 131.9 | 162 | intergenic (‑81/‑182) | azuC/yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| Reads supporting (aligned to +/- strand): ref base . (71/63); new base A (18/10); total (89/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTA > CP009273/1981374‑1981668 | gCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCttt > 1:807080/1‑148 (MQ=255)gCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCttt < 1:2839573/148‑1 (MQ=255) ggTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑At < 1:2673940/148‑1 (MQ=255) tACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑Atgt > 1:2810893/1‑148 (MQ=255) gTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGAt < 2:651628/148‑1 (MQ=255) tGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATCGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACaaa < 2:230600/148‑1 (MQ=255) cGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATcac > 1:3244084/1‑148 (MQ=255) cGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATcac > 1:3244312/1‑148 (MQ=255) cTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATa > 1:2774826/1‑148 (MQ=255) cTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATa > 1:2742053/1‑148 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAAt < 1:3076415/148‑1 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTATTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAAt < 1:228531/148‑1 (MQ=255) cAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATAACATAAAt > 2:341959/1‑148 (MQ=255) cAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATa > 2:2185937/1‑148 (MQ=255) tAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAccc < 2:893057/148‑1 (MQ=255) tAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAccc > 1:1958668/1‑148 (MQ=255) aGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAcccc > 1:1988819/1‑148 (MQ=255) aGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACAATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAcccc > 2:479347/1‑148 (MQ=255) gTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATAcccc > 1:1832512/1‑148 (MQ=255) ttATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCtt > 1:3215279/1‑148 (MQ=255) tATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCttt > 1:2235670/1‑148 (MQ=255) aTTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTa < 1:1025727/148‑1 (MQ=255) aTTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTa < 1:1024633/148‑1 (MQ=255) gAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAAt < 1:1503502/148‑1 (MQ=255) gAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATg < 1:325690/148‑1 (MQ=255) gAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCAATCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATg < 1:2058781/148‑1 (MQ=255) cATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTta > 2:1339178/1‑148 (MQ=255) cATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTta > 2:15981/1‑148 (MQ=255) aTACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTtat > 1:603624/1‑148 (MQ=255) aTACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTtat > 1:952120/1‑148 (MQ=255) tACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTtata > 2:2456327/1‑148 (MQ=255) aCTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaa < 2:3295012/148‑1 (MQ=255) ttttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa < 2:2172677/148‑1 (MQ=255) ttttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa > 1:308715/1‑148 (MQ=255) ttttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa < 2:2774835/148‑1 (MQ=255) ttttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa > 1:1160894/1‑148 (MQ=255) tttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaaa > 1:2135249/1‑148 (MQ=255) tttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaaa < 2:2129233/148‑1 (MQ=255) ttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAAt < 2:525389/148‑1 (MQ=255) aGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGAt > 2:2082110/1‑148 (MQ=255) ggATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATa < 1:843471/148‑1 (MQ=255) aTTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAAt < 2:3215161/148‑1 (MQ=255) aTTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAAt < 2:3215279/148‑1 (MQ=255) ttttGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATc > 2:3065239/1‑148 (MQ=255) tGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCaaa < 1:2892194/148‑1 (MQ=255) cgcAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCaaaaa > 2:2617552/1‑148 (MQ=255) gcgGCACTCCGACCATTTGTTATACAGGTTTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTa < 1:3202060/148‑1 (MQ=255) cgGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTAt > 2:2751110/1‑148 (MQ=255) cgGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTAt > 2:2751096/1‑148 (MQ=255) taCCATTTTTTATAAATGTTTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATAAAAAAACAGCCCCCCTATTTCTGaca < 2:898025/147‑1 (MQ=255) aCCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACAcc < 1:2437529/148‑1 (MQ=255) ccATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCt < 2:859967/148‑1 (MQ=255) ccATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCt > 1:1752982/1‑148 (MQ=255) ccATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATAAAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCt < 2:859760/148‑1 (MQ=255) aTTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTAc > 2:345110/1‑148 (MQ=255) tttGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACa > 1:1361610/1‑148 (MQ=255) ttGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAg < 2:2806720/148‑1 (MQ=255) ttGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAg < 2:2283764/148‑1 (MQ=255) ttATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATTTTATACAAATCAAATAAATACCCCTTTAATTTTATAAAAATTATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATg < 1:601603/148‑1 (MQ=255) ataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGc < 2:790718/148‑1 (MQ=255) aCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCa > 1:119886/1‑148 (MQ=255) aCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCa > 1:119883/1‑148 (MQ=255) aGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAg > 2:2759694/1‑148 (MQ=255) aGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGa > 2:1557397/1‑148 (MQ=255) gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGaaa > 2:1365347/1‑148 (MQ=255) gtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAAt < 2:1393475/148‑1 (MQ=255) gtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATa > 1:959873/1‑148 (MQ=255) gtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGATCCCCTATTTCTGACACCTACAGATGGCAAGAAATa > 2:1493831/1‑148 (MQ=255) aTTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAgcg < 1:1994333/148‑1 (MQ=255) ttGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAgcgc > 2:504202/1‑148 (MQ=255) cTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGc > 1:1845882/1‑148 (MQ=255) ttGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGcc > 1:2787182/1‑148 (MQ=255) cTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt > 2:1658879/1‑148 (MQ=255) cTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt < 1:3288066/148‑1 (MQ=255) ttATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt > 2:2996324/1‑148 (MQ=255) ttATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt > 2:2996159/1‑148 (MQ=255) ttATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTc > 1:504488/1‑148 (MQ=255) taataTGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCttt < 2:910151/148‑1 (MQ=255) taataTGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCttt > 1:2028211/1‑148 (MQ=255) taataTGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCttt > 2:927803/1‑148 (MQ=255) aataTCACAACCAACACAAAAATCAATCTTT‑ATGTGATACAAAACACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtttt < 1:1417849/148‑1 (MQ=255) agACAACCATCAAAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTAAAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCgg < 1:384433/147‑1 (MQ=255) gACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGc > 1:1418405/1‑148 (MQ=255) ccATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg < 2:968339/148‑1 (MQ=255) cATCACAAAAATCAATCTTTAATGTTATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg < 1:2734846/148‑1 (MQ=255) cacaAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgc < 2:3241563/148‑1 (MQ=255) aaaaTCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgcagc > 2:1989742/1‑148 (MQ=255) aaaaTCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgcagca > 2:2432986/1‑148 (MQ=255) aaaaTCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgcagca > 1:3152166/1‑148 (MQ=255) aaaTCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCAc > 2:1910771/1‑148 (MQ=255) atcaatcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTg > 2:2699037/1‑148 (MQ=255) atcaatcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTg < 2:1870974/148‑1 (MQ=255) aatcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTaa > 1:2598751/1‑148 (MQ=255) atcTTTAATGTCATACAAATAAAATAAATACCCCTTTAATTTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTaa < 1:341959/148‑1 (MQ=255) atcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAc > 2:2857066/1‑148 (MQ=255) tcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAcg > 2:1930435/1‑148 (MQ=255) tcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAcg > 1:3214523/1‑148 (MQ=255) ttt‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAcgcg < 2:1131281/148‑1 (MQ=255) tt‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGt > 1:2474229/1‑148 (MQ=255) t‑ATGTGATACAAATCACATAAATACCCCTTTACTGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTa < 2:2934091/148‑1 (MQ=255) | GCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTA > CP009273/1981374‑1981668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |