| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3833562 = | 17 (0.090) | 167 (0.900) | 90/272 | NT | 90.8% | intergenic (‑209/‑13) | nlpA/yicS | cytoplasmic membrane lipoprotein‑28/putative periplasmic protein |
| ? | CP009273 | 4487999 = | NA (NA) | intergenic (+242/‑90) | intB/insC1 | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase/IS2 repressor TnpA | |||||
Only 100 of 367 total aligned reads displayed.
CGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGC > CP009273/3833416‑3833709 | cgaaacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTaaa > 1:2758248/1‑148 (MQ=255) gaaacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTaaaa < 1:2036841/148‑1 (MQ=255) aaacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAg > 2:2360435/1‑148 (MQ=255) ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAgg > 2:2230037‑M1/144‑148 (MQ=255) aacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAgg < 2:1676036/148‑1 (MQ=255) tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGt < 2:1865749‑M1/6‑1 (MQ=255) cGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTAGTAAAAGGTT < 1:2297651‑M2/148‑1 (MQ=255) cctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGa > 1:1020851‑M1/140‑148 (MQ=255) cTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGg > 1:3265778‑M2/1‑147 (MQ=255) tgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattgtttgtctggagattcagggggccagtctAAAGGTTGAAt < 1:2740464‑M1/11‑1 (MQ=255) cGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgattt > 2:1737858‑M2/1‑143 (MQ=255) gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCa > 2:1256645‑M1/135‑148 (MQ=255) aaGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgccc < 1:1219388‑M2/148‑10 (MQ=255) cgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑c < 2:356826‑M1/20‑1 (MQ=255) gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑cc > 2:1194063‑M1/128‑148 (MQ=255) tAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCa < 1:478370/148‑1 (MQ=255) tAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCa < 1:1497448/148‑1 (MQ=255) cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCaa < 2:797956‑M1/23‑1 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGa < 2:1054147‑M1/26‑1 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggacagtctAAAGGTTGAATCCATGAAA‑CCAACGa < 1:3201469‑M1/26‑1 (MQ=255) aaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttc < 1:1588579‑M2/148‑19 (MQ=255) tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGac < 2:263429‑M1/27‑1 (MQ=255) tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGac < 2:1362497‑M1/27‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccag < 2:2068943‑M2/148‑22 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAATCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccaga < 1:2593665‑M2/148‑23 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttatgtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGc > 2:2407404‑M1/114‑148 (MQ=255) aGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctg < 2:2294895‑M2/148‑29 (MQ=255) gccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTAt < 1:2514198‑M1/39‑1 (MQ=255) cccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAACGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTAt > 2:1701204‑M1/110‑148 (MQ=255) cctaagacatcaatcatctgttctcaaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTAttt > 2:1755747‑M1/108‑148 (MQ=255) atatAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatca > 1:2065973‑M2/1‑114 (MQ=255) ataAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcact < 1:2316923‑M2/148‑37 (MQ=255) taAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcactt < 2:1787160‑M2/148‑38 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACt < 2:2683052‑M1/46‑1 (MQ=255) aaaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcactta < 1:2707523‑M2/148‑39 (MQ=255) caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggcgattcagggggccagtctAATGGTTGATTCCATGAAA‑CCAACGACACTACTGCTTATTTTCACtttttt < 2:844739‑M1/51‑1 (MQ=255) caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACtttttt < 2:865083‑M1/51‑1 (MQ=255) cTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaaccca > 2:2454871‑M2/1‑105 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGTTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCg > 2:1322412‑M1/96‑148 (MQ=255) cACTTATTACTCACCCCGCAAGCGCGTTTCGTACAGCATTATGCGAGCTATTAAAGCAAACTCCACTTATGATTCATTCTATACAAATTTTTAAAAGGTTGAATCAATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCt < 1:365509/148‑1 (MQ=255) gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc < 1:872602‑M1/60‑1 (MQ=255) tctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTAGCTATGACAg < 2:874800‑M1/62‑1 (MQ=255) tACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg > 2:3266165‑M2/1‑94 (MQ=255) tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGt < 1:2892889‑M1/69‑1 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtata > 2:1577185‑M1/77‑148 (MQ=255) cAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat > 2:1141244‑M2/1‑83 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACg < 1:694791‑M1/74‑1 (MQ=255) gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGc < 1:98184‑M1/75‑1 (MQ=255) gcgcGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt < 1:636583‑M2/148‑69 (MQ=255) gcgcGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt > 2:1627509‑M2/1‑80 (MQ=255) cgcgTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc < 2:2107389‑M2/148‑70 (MQ=255) tttCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgt < 2:1980171‑M2/148‑74 (MQ=255) cGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc > 2:755649‑M2/1‑72 (MQ=255) cGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc > 1:2550153‑M2/1‑72 (MQ=255) gTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg > 2:3011727‑M2/1‑71 (MQ=255) aCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcgcctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag > 1:1134524‑M2/1‑69 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGACtttt < 2:151912‑M1/88‑1 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGc < 1:1771364‑M1/91‑1 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGc < 1:466369‑M1/91‑1 (MQ=255) cATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat < 2:1475389‑M2/148‑84 (MQ=255) tgatgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataa < 2:2720947‑M2/148‑86 (MQ=255) agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTc < 1:97952‑M1/93‑1 (MQ=255) gtatatcagttatttaagtttttttggttttgtggttattcagggggccagtctAAAGGTTTAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCa > 1:1954170‑M1/55‑148 (MQ=255) actatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc < 1:1074588‑M1/95‑1 (MQ=255) tgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc > 1:1757026‑M2/1‑60 (MQ=255) tgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc > 2:2593665‑M2/1‑60 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACt < 1:77427‑M1/96‑1 (MQ=255) tatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTg < 1:120011‑M1/97‑1 (MQ=255) tatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTg < 2:2729353‑M1/97‑1 (MQ=255) gagaGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca < 1:3096094‑M2/148‑90 (MQ=255) cacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAg > 2:1427282‑M1/49‑148 (MQ=255) cacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAg < 1:747465‑M1/100‑1 (MQ=255) agCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcg < 2:390337‑M2/148‑93 (MQ=255) ttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTcc < 1:1315816‑M1/103‑1 (MQ=255) ttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACAACTGCTTATTATCACAGTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTcc < 2:3115438‑M1/103‑1 (MQ=255) tttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCa < 1:2135369‑M1/106‑1 (MQ=255) ttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaa < 2:2805777‑M1/107‑1 (MQ=255) aaaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg > 1:1787160‑M2/1‑49 (MQ=255) gCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg > 2:734979‑M2/1‑46 (MQ=255) gCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg > 2:2934877‑M2/1‑46 (MQ=255) agtgatattggttgtctgtagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAag < 1:441449‑M1/110‑1 (MQ=255) cAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga > 1:930382‑M2/1‑45 (MQ=255) tgatattggttgtctggagattctgggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAagag > 1:2954154‑M1/37‑148 (MQ=255) atattggttgtctggagtttcagggggccagaatAAAGTTTGAATCCATGACA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGaa > 1:1839648‑M1/35‑148 (MQ=255) cacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt > 1:61664‑M2/1‑38 (MQ=255) ttATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt > 2:2518984‑M2/1‑35 (MQ=255) tctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTa < 2:900400‑M1/124‑1 (MQ=255) tGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat < 1:2220504‑M2/148‑117 (MQ=255) gCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata > 1:2381359‑M2/1‑31 (MQ=255) aTTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct < 2:975227‑M2/148‑123 (MQ=255) ttcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGa > 2:515215‑M1/17‑148 (MQ=255) tCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg < 2:2773590‑M2/148‑125 (MQ=255) agggggccagtatAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGAttt > 2:601260‑M1/14‑148 (MQ=255) gggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTa > 1:797956‑M1/13‑148 (MQ=255) ggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTAc < 1:3164263‑M1/137‑1 (MQ=255) acacATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc < 1:434477‑M2/148‑130 (MQ=255) aaaTTTTTAAAATGTTTAAATAATTAAACCCAACGACACTACTTCTTATTTTCACTTTTTTCGCTAGGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCACACTGCAGCCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACg < 1:571431/146‑1 (MQ=255) tttGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg < 1:838232‑M2/148‑135 (MQ=255) tAATGGTTTAATCCATGAAA‑CAAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTg > 1:1865749‑M1/2‑148 (MQ=255) aaaGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggt > 2:444182‑M2/1‑8 (MQ=255) | CGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGC > CP009273/3833416‑3833709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |