| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP009273 | 3,841,409 | +CAACCAG | 91.5% | coding (576/1320 nt) | uhpC ← | membrane protein regulates uhpT expression |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3841409 | 13 (0.070) | 144 (0.810) +CAACCAG |
81/240 | NT | 91.5% | coding (576/1320 nt) | uhpC | membrane protein regulates uhpT expression |
| ? | CP009273 | 3841410 = | 14 (0.070) | coding (575/1320 nt) | uhpC | membrane protein regulates uhpT expression | |||||
Only 100 of 178 total aligned reads displayed.
GATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT > CP009273/3841262‑3841556 | gATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATa > 2:478844/1‑148 (MQ=255)gATCTCATTACGCGTCAACCCTGCCCCTTCTTGTTGTAGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATa < 2:1052040/148‑1 (MQ=255) aTCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCCGCAGAGAAAAATCCCCACGACTATCGCCATAc > 1:588603‑M1/1‑147 (MQ=255) ctTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaacc > 1:2738279‑M1/1‑143 (MQ=255) ttACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccag > 2:1280427‑M1/1‑141 (MQ=255) aCGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagca > 2:96519‑M1/1‑139 (MQ=255) aCGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagca > 1:1942527‑M1/1‑139 (MQ=255) cgTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaacc > 1:502077‑M1/1‑136 (MQ=255) tCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAatcat > 1:752435/1‑148 (MQ=255) aaCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagca < 2:168542‑M1/148‑17 (MQ=255) aCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaa > 1:2711664‑M1/1‑131 (MQ=255) aCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCACCACAGAAAAAACCCCACGACTATCGCCATAcaaccagcaaccaccaa > 1:130299‑M1/1‑131 (MQ=255) aCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACCCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaa > 1:128083‑M1/1‑131 (MQ=255) gCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatc > 2:1923356‑M1/1‑126 (MQ=255) ccccTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatca < 2:3254407‑M1/148‑24 (MQ=255) cccTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcat < 1:1827049‑M1/148‑25 (MQ=255) ttcttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatccc > 1:2192798‑M1/1‑121 (MQ=255) tcttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccg > 2:1251019‑M1/1‑120 (MQ=255) cttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccgg < 1:2593162‑M1/148‑30 (MQ=255) cttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccgg < 1:2593098‑M1/148‑30 (MQ=255) ttgttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggc < 1:1058955‑M1/148‑31 (MQ=255) gttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGcc < 2:238881/148‑1 (MQ=255) ttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacg > 2:2566354‑M1/1‑115 (MQ=255) gAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcactcatcatcccggcacgccagc > 2:2574073‑M1/1‑110 (MQ=255) gAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagc > 2:919733‑M1/1‑110 (MQ=255) aGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagcc > 2:2348656‑M1/1‑109 (MQ=255) aTTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTCACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGACACATCCCCACGACTATCGCCCTAcaaccagcacccagcaatcatcatcccggcacgccagccgtca > 2:2084731‑M1/1‑105 (MQ=255) aGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagc > 2:1077855‑M1/1‑99 (MQ=255) gcgTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgca < 1:1458117‑M1/148‑53 (MQ=255) cgtcgtGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcag < 2:620676‑M1/148‑54 (MQ=255) cgtGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAt > 1:18795/1‑148 (MQ=255) tgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgct > 1:2276830‑M1/1‑90 (MQ=255) gtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctg > 2:2526668‑M1/1‑89 (MQ=255) tCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgc > 1:2436129‑M1/1‑88 (MQ=255) cGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCAGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgcc > 2:1599110‑M1/1‑87 (MQ=255) ccATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccat < 1:1285914‑M1/148‑64 (MQ=255) agtcaCCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatca < 2:3154786‑M1/146‑66 (MQ=255) aTTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatca > 2:3209236‑M1/1‑83 (MQ=255) tCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcaca < 1:732246‑M1/148‑68 (MQ=255) tCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcaca > 1:798892‑M1/1‑81 (MQ=255) tCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcaca < 2:1263116‑M1/148‑68 (MQ=255) accgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaat < 1:2241030‑M1/148‑70 (MQ=255) accgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaat > 2:2677423‑M1/1‑79 (MQ=255) accgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaat > 1:2180017‑M1/1‑79 (MQ=255) accgaccgCCGGTAAACCTAACGCCGGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaat < 2:2410441‑M1/148‑70 (MQ=255) ccgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatg > 1:3199687‑M1/1‑78 (MQ=255) cgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgg < 1:1917610‑M1/148‑72 (MQ=255) accgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatggga > 2:755799‑M1/1‑75 (MQ=255) accgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatggga > 2:757099‑M1/1‑75 (MQ=255) ccgccgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaa < 1:3273127‑M1/148‑75 (MQ=255) ccgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTCTCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatga < 2:1198730‑M1/148‑78 (MQ=255) gTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtg > 2:1115978‑M1/1‑68 (MQ=255) gTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtg < 1:1290956‑M1/148‑81 (MQ=255) tAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgc > 2:1221490‑M1/1‑67 (MQ=255) aaaCCGAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCAGAcaaccagcaaccatcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcg < 1:1746754‑M1/148‑83 (MQ=255) aCCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgcc > 1:1009519‑M1/1‑64 (MQ=255) ccTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccg < 2:1079250‑M1/148‑86 (MQ=255) ccTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccg < 2:2730962‑M1/148‑86 (MQ=255) cTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgc > 2:2071172‑M1/1‑62 (MQ=255) aaCGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccg > 2:1472451‑M1/1‑60 (MQ=255) aCGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccga > 2:2595535‑M1/1‑59 (MQ=255) cTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgtt < 1:96519‑M1/148‑94 (MQ=255) gCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttat < 1:2626070‑M1/148‑96 (MQ=255) gCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgc > 1:3010294‑M1/1‑49 (MQ=255) gCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgc < 1:2122325‑M1/148‑100 (MQ=255) gCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgc < 2:1994349‑M1/148‑100 (MQ=255) tCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtg > 1:3208811‑M1/1‑45 (MQ=255) tCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtg > 1:2658482‑M1/1‑45 (MQ=255) tCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtg > 2:122368‑M1/1‑45 (MQ=255) cgTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttc < 2:2296049‑M1/148‑107 (MQ=255) gccgccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccata < 1:2869729‑M1/148‑111 (MQ=255) ccgccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataa > 1:454021‑M1/1‑37 (MQ=255) ccgccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataa < 2:852221‑M1/148‑112 (MQ=255) ccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgc < 2:2868344‑M1/148‑115 (MQ=255) ccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgc < 2:2868351‑M1/148‑115 (MQ=255) ccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgc > 2:1183568‑M1/1‑34 (MQ=255) cagcagAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcc < 1:831222‑M1/148‑116 (MQ=255) cagAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccac > 1:1260603‑M1/1‑30 (MQ=255) gagaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccacca < 1:1197170‑M1/148‑121 (MQ=255) gagaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccacca > 2:376164‑M1/1‑28 (MQ=255) gagaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccacca > 1:674759‑M1/1‑28 (MQ=255) gagaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccacca > 1:336486‑M1/1‑28 (MQ=255) gagaAAAATCCCCACGACAATCGCCATAcaaccagaaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcccaatgggaatgagagcgccgccgacgttatgcgccgtgttccaaaatgcccacca > 1:1354517‑M1/1‑28 (MQ=255) aaaaTCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCt > 1:1985345/1‑148 (MQ=255) tCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgc > 1:1891250‑M1/1‑20 (MQ=255) ccccACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcg > 2:138330‑M1/1‑19 (MQ=255) ccccACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcg > 2:137700‑M1/1‑19 (MQ=255) ccACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgct > 1:123916‑M1/1‑17 (MQ=255) ccACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACg > 2:2994948/1‑148 (MQ=255) ccACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACg < 1:1329501/148‑1 (MQ=255) ccACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACg < 1:2977578/148‑1 (MQ=255) aCGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTg < 1:427700/148‑1 (MQ=255) aTCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgt > 2:2301111‑M1/1‑9 (MQ=255) ccATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaat < 2:2738279‑M1/148‑144 (MQ=255) ccATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaat > 2:1998710‑M1/1‑5 (MQ=255) ccATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc < 2:2143814/148‑1 (MQ=255) ccATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc < 2:2144129/148‑1 (MQ=255) aTAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaatac > 1:1762130‑M1/1‑3 (MQ=255) acaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaatacca > 2:172670‑M1/1‑1 (MQ=255) acaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaatacca > 1:1710586‑M1/1‑1 (MQ=255) | GATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT > CP009273/3841262‑3841556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |