| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3180783 | NA (NA) | 156 (0.840) | 98/270 | NT | 88.8% | pseudogene (4/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| ? | CP009273 | = 3833569 | 20 (0.110) | intergenic (‑216/‑6) | nlpA/yicS | cytoplasmic membrane lipoprotein‑28/putative periplasmic protein | |||||
Only 100 of 406 total aligned reads displayed.
GCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCA > CP009273/3833422‑3833715 | gCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTG < 2:222141‑M2/148‑1 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGaa > 1:2202354‑M1/139‑148 (MQ=255) tgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAAt < 1:2648548‑M1/11‑1 (MQ=255) cGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgattt < 1:3279075‑M2/148‑6 (MQ=255) cGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgattt < 1:1641377‑M2/148‑6 (MQ=255) gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCa > 2:3078271‑M1/135‑148 (MQ=255) tAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATg > 2:478370/1‑148 (MQ=255) ggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATg < 1:2722334‑M1/16‑1 (MQ=255) ggtacgccgtcagcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATg > 2:1680431‑M1/133‑148 (MQ=255) gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑cc > 2:1194063‑M1/128‑148 (MQ=255) aTAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctat > 2:2149178‑M2/1‑135 (MQ=255) tAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCa < 1:1497448/148‑1 (MQ=255) tAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCa < 1:478370/148‑1 (MQ=255) aaaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatattt > 2:1717114‑M2/1‑131 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGa < 2:1777112‑M1/26‑1 (MQ=255) tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGac < 2:263429‑M1/27‑1 (MQ=255) aGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttcc < 2:949618‑M2/148‑20 (MQ=255) gcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGaca < 2:2294624‑M1/28‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCACGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccag < 2:2069010‑M2/148‑22 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccag < 1:2926894‑M2/148‑22 (MQ=255) aTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagac < 1:2022758‑M2/148‑24 (MQ=255) ttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACactac < 2:800168‑M1/32‑1 (MQ=255) aaaaGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacat > 2:847576‑M2/1‑123 (MQ=255) gAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttat < 1:764857‑M2/148‑33 (MQ=255) ataAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcact < 1:2316923‑M2/148‑37 (MQ=255) ataAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTGCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcact < 1:1800984‑M2/148‑37 (MQ=255) agacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCAc < 2:780065‑M1/45‑1 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACt < 2:2683052‑M1/46‑1 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACt < 2:1029646‑M1/46‑1 (MQ=255) atcatctgttctccaatgactagtctaaacactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCg > 2:2450558‑M1/96‑148 (MQ=255) cACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattac < 2:3289203‑M2/148‑48 (MQ=255) gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc < 1:872417‑M1/60‑1 (MQ=255) tctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTCTGCCAg < 2:874777‑M1/62‑1 (MQ=255) ccACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg < 1:715271‑M2/148‑61 (MQ=255) atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCg < 1:952199‑M1/68‑1 (MQ=255) atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCg < 1:1852912‑M1/68‑1 (MQ=255) actagtataaaaactagtattaagactatcacttatttaagttatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtat > 1:3223624‑M1/78‑148 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtata < 2:1465784‑M1/72‑1 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtata > 2:1577185‑M1/77‑148 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtcgggagattccgggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACg > 2:1865132‑M1/75‑148 (MQ=255) gtctaaaaaatagtattaagactatcaattatttaagtgatattggttgtctggagattcaggggtccagtcgAATGGTTTAATCCATTAAA‑CCAAAGACACTAATGCTGATTTTCACTTATTTCGGTATGCAAGGCATCGTCTACGc < 1:98050‑M1/75‑1 (MQ=255) gcgcGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt < 1:636160‑M2/148‑69 (MQ=255) gcgcGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt > 2:1627509‑M2/1‑80 (MQ=255) gTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg > 2:2059516‑M2/1‑71 (MQ=255) aCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcgcctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag > 1:1134524‑M2/1‑69 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGACtttt < 2:151912‑M1/88‑1 (MQ=255) attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTa < 1:2762537‑M1/89‑1 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGc < 1:466369‑M1/91‑1 (MQ=255) cATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat > 2:2905342‑M2/1‑65 (MQ=255) cATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat < 1:1349108‑M2/148‑84 (MQ=255) gtatatcagttatttaagtttttttggttttgtggttattcagggggccagtctAAAGGTTTAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCa > 1:1954170‑M1/55‑148 (MQ=255) gactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCa > 2:2367988‑M1/55‑148 (MQ=255) actatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc < 1:1074588‑M1/95‑1 (MQ=255) tgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc > 1:1758172‑M2/1‑60 (MQ=255) tgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc > 2:2593665‑M2/1‑60 (MQ=255) tatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATATTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTATCTcacag < 1:120662‑M1/97‑3 (MQ=255) cacttatttaagttttattggttgtctggagattcagggggccagtctAAAGTTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAg > 2:1427274‑M1/49‑148 (MQ=255) acttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGt > 2:324433‑M1/48‑148 (MQ=255) cttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTc < 2:40753‑M1/102‑1 (MQ=255) cGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca > 1:2524756‑M2/1‑54 (MQ=255) aTGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcact < 1:814155‑M2/148‑97 (MQ=255) tttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCa < 1:3059849‑M1/106‑1 (MQ=255) ttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaa < 2:2469445‑M1/107‑1 (MQ=255) aaaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg < 1:3120211‑M2/148‑100 (MQ=255) aaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc > 1:393066‑M2/1‑48 (MQ=255) aaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc > 2:888417‑M2/1‑48 (MQ=255) aaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc < 1:1834329‑M2/148‑101 (MQ=255) gCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg < 2:134585‑M2/148‑103 (MQ=255) gCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAag > 1:2128268/1‑148 (MQ=255) agtgatattggttgtctgtagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAag < 1:441117‑M1/110‑1 (MQ=255) cAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga > 1:930375‑M2/1‑45 (MQ=255) tattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGaaa > 1:780065‑M1/34‑148 (MQ=255) tggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAAcc < 1:2552156‑M1/118‑1 (MQ=255) cacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt > 1:61664‑M2/1‑38 (MQ=255) cTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg > 2:1102263‑M2/1‑36 (MQ=255) aTGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta < 2:2775086‑M2/148‑116 (MQ=255) gCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTAt < 2:1280988/148‑1 (MQ=255) tcagggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGAt > 2:3000685‑M1/16‑148 (MQ=255) taaacttttGTAAAAGGTTTAATCAATTAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCTGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTa < 1:1286431/142‑1 (MQ=255) ggggccagtctAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTtaa < 1:3164384‑M1/137‑2 (MQ=255) cacaTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc > 2:2745693‑M2/1‑18 (MQ=255) aaaTTTTTAAAATGTTTAAATAATTAAACCCAACGACACTACTTCTTATTTTCACTTTTTTCGCTAGGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCACACTGCAGCCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACg < 1:571431/146‑1 (MQ=255) caTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc < 2:739835‑M2/148‑133 (MQ=255) AAAGGTTTAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGc > 2:2722334‑M1/1‑148 (MQ=255) aaGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt < 1:1568567‑M2/148‑142 (MQ=255) aaGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctagaacgcctctgcaaggtt < 2:2312999‑M2/148‑142 (MQ=255) aaGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCa > 1:2235396/1‑148 (MQ=255) aGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttc > 1:671977‑M2/1‑6 (MQ=255) aGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttc < 2:1235971‑M2/148‑143 (MQ=255) ggTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttct < 1:1012938‑M2/148‑144 (MQ=255) ggTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACg > 1:1782599/1‑148 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattccaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 1:2503031‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 2:1752145‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 1:2290151‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg < 1:2377059‑M2/148‑147 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 2:696762‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 1:456652‑M2/1‑2 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgc < 1:1155087‑M2/148‑148 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgc < 2:570130‑M2/148‑148 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgc < 2:2557866‑M2/148‑148 (MQ=255) | GCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAA‑CCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCA > CP009273/3833422‑3833715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |