| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,873,087 | G→T | 100% | V15V (GTC→GTA) | ygbT ← | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,873,087 | 0 | G | T | 99.4% | 578.8 / ‑4.1 | 176 | V15V (GTC→GTA) | ygbT | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (97/77); total (98/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 176 total aligned reads displayed.
CTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGC > CP009273/2872942‑2873231 | cTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAc > 2:1719284/1‑148 (MQ=255) gCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgc > 1:2893321/1‑148 (MQ=255) gCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgc > 2:178308/1‑148 (MQ=255) aaCCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTg < 2:726633/148‑1 (MQ=255) aaCCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTg < 1:2546774/148‑1 (MQ=255) aCCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGa > 1:1919338/1‑148 (MQ=255) cccGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAg < 1:1248366/148‑1 (MQ=255) cccGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAg < 1:1248773/148‑1 (MQ=255) ccGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGt > 2:1275882/1‑148 (MQ=255) cGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTg < 2:77440/148‑1 (MQ=255) tgtACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGa > 1:2314201/1‑148 (MQ=255) gtACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGaa < 1:1439104/148‑1 (MQ=255) gtACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGaa < 2:1220104/148‑1 (MQ=255) cAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATggg > 2:121799/1‑148 (MQ=255) cAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATggg > 2:486577/1‑148 (MQ=255) aGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGACTGGGa > 2:226847/1‑148 (MQ=255) aGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGa > 2:1900016/1‑148 (MQ=255) gTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGAtt > 1:3143399/1‑148 (MQ=255) ttCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTa < 1:848927/148‑1 (MQ=255) tCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTaa < 1:1904342/148‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgg < 1:1068852/148‑1 (MQ=255) gCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg < 2:1572376/148‑1 (MQ=255) cATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGa > 2:2831382/1‑148 (MQ=255) atgCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGcc < 1:278585/148‑1 (MQ=255) atgCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGcc > 2:2925800/1‑148 (MQ=255) ggCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTc > 1:1103116/1‑148 (MQ=255) gCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTGTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGTGATTAAGGGGAAGCCAGGTCa < 1:196138/148‑1 (MQ=255) gCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGACTGGGATTAAGGGGAAGCCAGGTCa > 1:1843425/1‑148 (MQ=255) gCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCa < 1:2254309/148‑1 (MQ=255) gCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCa < 1:2253488/148‑1 (MQ=255) gCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCa < 2:2633567/148‑1 (MQ=255) cAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTTCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCAt < 2:437576/148‑1 (MQ=255) gAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttat < 2:1843714/148‑1 (MQ=255) aGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttatt > 2:1083694/1‑148 (MQ=255) gCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttatta < 2:484988/148‑1 (MQ=255) ccAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTac < 2:2457134/148‑1 (MQ=255) ccAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTac > 1:1768494/1‑148 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCt > 1:2909699/1‑148 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCt > 1:2059806/1‑148 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCt > 1:2059751/1‑148 (MQ=255) ggAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa < 1:1318655/148‑1 (MQ=255) ggAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa < 2:3214181/148‑1 (MQ=255) ggAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa > 1:1562464/1‑148 (MQ=255) ggAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa > 1:2486102/1‑148 (MQ=255) gAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCaa < 2:150012/148‑1 (MQ=255) aaTATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAAt < 2:590969/148‑1 (MQ=255) atGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATcac > 1:2388803/1‑148 (MQ=255) atGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATcac < 2:2127776/148‑1 (MQ=255) atGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATcac > 2:2462449/1‑148 (MQ=255) tGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTgg < 1:1991462/148‑1 (MQ=255) tGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTgg < 2:1024856/148‑1 (MQ=255) tGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTgg > 2:3156771/1‑148 (MQ=255) tCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaa < 1:1148555/148‑1 (MQ=255) tCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaa < 2:819245/148‑1 (MQ=255) cccTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaaa > 1:129798/1‑148 (MQ=255) cTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGa < 1:866939/148‑1 (MQ=255) cTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGa > 2:1130376/1‑148 (MQ=255) gTCTTGTCGATAAGAACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCAAGTATACGCGATATTTGAGTGGAATGGGATTAAGTGGAAGCCAGGTCATTTTATTACACCTCAATCACATTGGAGCCAAAGATa > 1:2037528/1‑148 (MQ=255) tCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAg < 2:2746017/148‑1 (MQ=255) tCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAg > 2:1088228/1‑148 (MQ=255) cTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGc > 2:2433148/1‑148 (MQ=255) cTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCAAGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGc > 2:1264862/1‑148 (MQ=255) tGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCaa > 1:366064/1‑148 (MQ=255) gTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAg < 2:211087/148‑1 (MQ=255) aTAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCcac < 1:2593513/148‑1 (MQ=255) tAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCcaca < 1:16247/148‑1 (MQ=255) aaGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACAt > 1:3078609/1‑148 (MQ=255) aaGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACAt > 1:276413/1‑148 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATccc > 2:487149/1‑148 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATccc > 1:1982489/1‑148 (MQ=255) cAAACGCGCCATCTATTACCTCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt > 1:450701/1‑148 (MQ=255) aaaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATc > 2:3220295/1‑148 (MQ=255) aaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCg < 1:2400403/148‑1 (MQ=255) aCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGa > 1:584251/1‑148 (MQ=255) gcCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTa < 1:2404039/148‑1 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAg > 2:3298682/1‑148 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAg > 1:2469254/1‑148 (MQ=255) cATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGc < 2:2326258/148‑1 (MQ=255) aTCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATATAGCt < 2:1591752/148‑1 (MQ=255) aTTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGcc > 2:1553215/1‑148 (MQ=255) aTCGATCTGCCCATATTGCAGAAATATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATa < 1:2640353/148‑1 (MQ=255) aTCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATa < 1:987233/148‑1 (MQ=255) aTCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATa > 1:972845/1‑148 (MQ=255) aTCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATa > 2:736107/1‑148 (MQ=255) tCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTATGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTg < 2:1113285/148‑1 (MQ=255) tCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTg > 2:2590285/1‑148 (MQ=255) cTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGc < 2:2289247/148‑1 (MQ=255) gCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTg > 2:1623182/1‑148 (MQ=255) tatTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACaa > 2:414759/1‑148 (MQ=255) tatTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACaa > 2:1259046/1‑148 (MQ=255) cAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCt < 2:129798/148‑1 (MQ=255) gAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAt > 1:421771/1‑148 (MQ=255) aaaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAtt > 1:1171549/1‑148 (MQ=255) aaaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAtt > 1:1431568/1‑148 (MQ=255) aaaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAtt > 2:1716210/1‑148 (MQ=255) aaaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAtt < 1:284853/148‑1 (MQ=255) aaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTa < 2:2213475/148‑1 (MQ=255) aGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTaa > 2:1766536/1‑148 (MQ=255) tCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGc < 1:2882738/148‑1 (MQ=255) tCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATAACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGc > 2:1336977/1‑148 (MQ=255) | CTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGC > CP009273/2872942‑2873231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |