Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,964,899 C→A 12.9% intergenic (+51/‑57) ygdR → / → tas DUF903 family verified lipoprotein/putative NADP(H)‑dependent aldo‑keto reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,964,8990CA12.9% 455.5 / 31.1 142intergenic (+51/‑57)ygdR/tasDUF903 family verified lipoprotein/putative NADP(H)‑dependent aldo‑keto reductase
Reads supporting (aligned to +/- strand):  ref base C (58/65);  new base A (9/10);  total (67/75)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 170 total aligned reads displayed.

AATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCG  >  CP009273/2964752‑2965046
                                                                                                                                                   |                                                                                                                                                   
aaTTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttc                                                                                                                                                     >  1:1292872/1‑148 (MQ=255)
  ttGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttccc                                                                                                                                                   >  2:926369/1‑148 (MQ=255)
  ttGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttacc                                                                                                                                                   <  1:63430/148‑1 (MQ=255)
  ttGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttacc                                                                                                                                                   <  1:1693897/148‑1 (MQ=255)
   tgatgatgaTACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttccct                                                                                                                                                  <  1:2317559/148‑1 (MQ=255)
      tgatgatACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTttcccttcc                                                                                                                                               <  2:2681305/148‑1 (MQ=255)
         tgatACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCctc                                                                                                                                            <  2:2099424/148‑1 (MQ=255)
         tgatACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCctc                                                                                                                                            >  2:2935920/1‑148 (MQ=255)
           atACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTg                                                                                                                                          >  2:671264/1‑148 (MQ=255)
           atACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTg                                                                                                                                          <  2:692274/148‑1 (MQ=255)
           atACCGGGCTGGTGAGTTATCACGATCAGAAAGGTAACGCGATGCAAATTAACCGTGAAGATGTTTCGCAAATTCTTGAACGTTAACAAATAAGCTCAGCATCCGGCTGGCCATAAGATTTTTCTCTTTCCCTTTTACCTACCCTCTg                                                                                                                                          >  2:671176/1‑148 (MQ=255)
                   cTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAttttt                                                                                                                                  <  2:1311677/148‑1 (MQ=255)
                   cTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAttttt                                                                                                                                  <  2:1246943/148‑1 (MQ=255)
                   cTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCAttttt                                                                                                                                  <  1:3005903/148‑1 (MQ=255)
                     ggTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTtat                                                                                                                                <  1:1126222/148‑1 (MQ=255)
                      gTGAGTTATCACGATCAGCAAGGTAGCGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTtata                                                                                                                               <  2:854251/148‑1 (MQ=255)
                      gTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTtata                                                                                                                               <  2:52569/148‑1 (MQ=255)
                      gTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTtata                                                                                                                               >  1:152615/1‑148 (MQ=255)
                         aGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTc                                                                                                                            <  2:1559276/148‑1 (MQ=255)
                           ttATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCt                                                                                                                          <  1:2064840/148‑1 (MQ=255)
                              tCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTAt                                                                                                                       <  1:3221987/148‑1 (MQ=255)
                                aCGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGt                                                                                                                     <  2:2223782/148‑1 (MQ=255)
                                    tCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTg                                                                                                                 >  2:119266/1‑148 (MQ=255)
                                    tCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTg                                                                                                                 >  1:532193/1‑148 (MQ=255)
                                    tCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTg                                                                                                                 >  1:2299631/1‑148 (MQ=255)
                                       gCAAGGTAACGCTATGAAAATTAACCGTGATGATGTTTCGAAAATTATTGAAAGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGAtt                                                                                                              <  1:513683/148‑1 (MQ=255)
                                        cAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATta                                                                                                             <  2:1959223/148‑1 (MQ=255)
                                        cAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATta                                                                                                             >  1:3293857/1‑148 (MQ=255)
                                         aaGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATtat                                                                                                            <  1:1002769/148‑1 (MQ=255)
                                          aGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGTTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATtata                                                                                                           <  1:2927036/148‑1 (MQ=255)
                                          aGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATtata                                                                                                           >  2:2036160/1‑148 (MQ=255)
                                          aGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATtata                                                                                                           >  2:2037568/1‑148 (MQ=255)
                                          aGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATtata                                                                                                           >  2:2812198/1‑148 (MQ=255)
                                            gTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTGTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATaaa                                                                                                         >  1:20150/1‑148 (MQ=255)
                                                  cgATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGaa                                                                                                   <  1:1671305/148‑1 (MQ=255)
                                                  cgATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGaa                                                                                                   <  2:1805686/148‑1 (MQ=255)
                                                    aTGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAAc                                                                                                 >  2:2388647/1‑148 (MQ=255)
                                                     tGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACg                                                                                                <  2:2135299/148‑1 (MQ=255)
                                                      gCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACgg                                                                                               >  1:2931935/1‑148 (MQ=255)
                                                       cAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGc                                                                                              <  1:1556622/148‑1 (MQ=255)
                                                           ttAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATg                                                                                          >  1:1232416/1‑148 (MQ=255)
                                                               ccGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAat                                                                                      <  2:531123/148‑1 (MQ=255)
                                                                  tgatgaTGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATc                                                                                   >  1:626200/1‑148 (MQ=255)
                                                                  tgatgaTGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATc                                                                                   >  1:274008/1‑148 (MQ=255)
                                                                  tgatgaTGTTTCGAAAATTATTGAACGTTAAAAAATACGGTCAGCATCCGGCTGGCATTAATATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCAATTTTTATATTCCTTATGTCGTTATTATAAAAAGGAAACGGCTATGCAATATc                                                                                   <  1:916340/148‑1 (MQ=255)
                                                                   gatgatGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCa                                                                                  >  2:538318/1‑148 (MQ=255)
                                                                    atgatgTTTCGCAAATTATTGAACTTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTGCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCAc                                                                                 <  1:2658826/148‑1 (MQ=255)
                                                                     tgatgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCAcc                                                                                >  1:1580000/1‑148 (MQ=255)
                                                                     tgatgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCAcc                                                                                >  2:830074/1‑148 (MQ=255)
                                                                     tgatgTTTCGCAAATTATTGAACGTTAAAAAATATTGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCAcc                                                                                <  2:2439138/148‑1 (MQ=255)
                                                                      gatgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCg                                                                               >  1:736306/1‑148 (MQ=255)
                                                                       atgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCATTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGt                                                                              <  2:2406009/148‑1 (MQ=255)
                                                                           ttCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATAc                                                                          >  2:732487/1‑148 (MQ=255)
                                                                             cGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTCTAccc                                                                        >  2:3223215/1‑148 (MQ=255)
                                                                             cGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATAccc                                                                        >  2:1583873/1‑148 (MQ=255)
                                                                                aaaTTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCcac                                                                     <  1:1363071/148‑1 (MQ=255)
                                                                                    tattGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGtt                                                                 <  2:967815/148‑1 (MQ=255)
                                                                                    tattGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGtt                                                                 <  2:1461054/148‑1 (MQ=255)
                                                                                    tattGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGtt                                                                 >  2:1945603/1‑148 (MQ=255)
                                                                                      ttGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCg                                                               >  2:85713/1‑148 (MQ=255)
                                                                                           cGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGa                                                          >  2:2249988/1‑148 (MQ=255)
                                                                                              tAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGt                                                       >  2:1545254/1‑148 (MQ=255)
                                                                                              tAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAAAGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGt                                                       >  1:2838626/1‑148 (MQ=255)
                                                                                                aCAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCa                                                     <  2:2545348/148‑1 (MQ=255)
                                                                                                aCAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCa                                                     >  1:463830/1‑148 (MQ=255)
                                                                                                 cAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAg                                                    <  1:732487/148‑1 (MQ=255)
                                                                                                 cAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTGTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAg                                                    <  2:3133842/148‑1 (MQ=255)
                                                                                                    aTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTCTGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCAc                                                 >  2:438144/1‑148 (MQ=255)
                                                                                                    aTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCAc                                                 >  2:2102321/1‑148 (MQ=255)
                                                                                                    aTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCAc                                                 >  2:2102775/1‑148 (MQ=255)
                                                                                                     tAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACg                                                <  1:2402069/148‑1 (MQ=255)
                                                                                                     tAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACg                                                <  1:2402040/148‑1 (MQ=255)
                                                                                                     tAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACg                                                >  1:580114/1‑148 (MQ=255)
                                                                                                        ggTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTg                                             >  1:561961/1‑148 (MQ=255)
                                                                                                           cAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTgggg                                          >  1:106155/1‑148 (MQ=255)
                                                                                                            aGCATCCGGCTGGCCTTAAGATTGTTATCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGc                                         <  2:1681314/148‑1 (MQ=255)
                                                                                                              cATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCtt                                       <  2:2641717/148‑1 (MQ=255)
                                                                                                                 ccGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGc                                    >  1:1406361/1‑148 (MQ=255)
                                                                                                                 ccGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGc                                    >  1:1831491/1‑148 (MQ=255)
                                                                                                                    gCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTTATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACg                                 <  1:1260188/148‑1 (MQ=255)
                                                                                                                     cTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGa                                >  1:723643/1‑148 (MQ=255)
                                                                                                                           ttAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTTATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGt                          <  1:3170048/148‑1 (MQ=255)
                                                                                                                            tAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGtt                         <  1:1451106/148‑1 (MQ=255)
                                                                                                                            tAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGtt                         <  1:3093079/148‑1 (MQ=255)
                                                                                                                            tAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGtt                         <  1:830074/148‑1 (MQ=255)
                                                                                                                            tAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGtt                         <  1:829693/148‑1 (MQ=255)
                                                                                                                            tAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGtt                         <  2:3293857/148‑1 (MQ=255)
                                                                                                                             aaGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGttt                        >  1:3032547/1‑148 (MQ=255)
                                                                                                                             aaGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGttt                        <  2:1292872/148‑1 (MQ=255)
                                                                                                                               gATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTgg                      >  1:1736706/1‑148 (MQ=255)
                                                                                                                                  ttttCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTga                   >  1:753608/1‑148 (MQ=255)
                                                                                                                                  ttttCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTga                   >  1:2924685/1‑148 (MQ=255)
                                                                                                                                          ttcccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacagaaca           >  2:602073/1‑148 (MQ=255)
                                                                                                                                          ttcccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacagaaca           >  2:2734358/1‑148 (MQ=255)
                                                                                                                                             ccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCg        >  2:2270020/1‑148 (MQ=255)
                                                                                                                                             ccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCg        >  2:1238953/1‑148 (MQ=255)
                                                                                                                                              cttttcccttCCCTCTGCCATTATTATATACCTTATGTCGTGATAAAAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGa       <  2:3057924/148‑1 (MQ=255)
                                                                                                                                               ttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGaa      <  2:110600/148‑1 (MQ=255)
                                                                                                                                                  tcccttccctCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGcc   >  1:3286029/1‑148 (MQ=255)
                                                                                                                                                   cccttccctCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCg  <  2:690383/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCG  >  CP009273/2964752‑2965046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: