| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,067,574 | C→A | 22.8% | E159* (GAA→TAA) | yggC ← | putative PanK family P‑loop kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,067,574 | 0 | C | A | 22.8% | 506.7 / 103.0 | 201 | E159* (GAA→TAA) | yggC | putative PanK family P‑loop kinase |
| Reads supporting (aligned to +/- strand): ref base C (77/78); new base A (25/21); total (102/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 202 total aligned reads displayed.
TCGGTGCGGGCATAAAATGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAGATTTTCCGTC > CP009273/3067429‑3067716 | tCGGTGCGGGCATAAAATGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTtcat < 1:629885/148‑1 (MQ=255) tGCGGGCATAAAATGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCatcatc < 1:3304089/148‑1 (MQ=255) gCATAAAATGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTa < 1:681892/148‑1 (MQ=255) tGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAg > 1:340289/1‑148 (MQ=255) gCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGt < 2:3284774/148‑1 (MQ=255) gCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGt > 1:1301886/1‑148 (MQ=255) gCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGt < 2:2504342/148‑1 (MQ=255) gCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGNGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGt < 1:1676903/148‑1 (MQ=255) cTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGtt > 1:2687936/1‑148 (MQ=255) tCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTc < 2:1022407/148‑1 (MQ=255) gCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCtt < 1:1035335/148‑1 (MQ=255) aCTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTcga < 1:2362995/148‑1 (MQ=255) aCTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTcga > 1:2556670/1‑148 (MQ=255) aCTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTcga > 1:2728608/1‑148 (MQ=255) cTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTcgac > 1:1959486/1‑148 (MQ=255) ttGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTcgacg < 1:206885/148‑1 (MQ=255) cgTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACg > 1:1723350/1‑148 (MQ=255) cgTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACg > 2:1379001/1‑148 (MQ=255) cgTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACg > 1:1350886/1‑148 (MQ=255) ttAATGCTCCCGCAATTTTACGACTAATCAAGCGCTCCAGCAGTATTTGAGCAGGTTCATGAATAAAAATAGAATAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATGCAGTAACAACCATTTTCCTTCGACGATGACGAg < 2:618842/148‑1 (MQ=255) ttAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAg > 2:1364276/1‑148 (MQ=255) ttAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAg < 2:481350/148‑1 (MQ=255) ttAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAg < 2:618891/148‑1 (MQ=255) tAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAgt < 2:879915/148‑1 (MQ=255) tAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTATCCTTCGACGATGACGAgt < 1:534072/148‑1 (MQ=255) aTCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAgtgg < 1:2158914/148‑1 (MQ=255) aTCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAgtgg > 1:2434217/1‑148 (MQ=255) tccCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCg < 1:3022729/148‑1 (MQ=255) tccCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCg < 2:1447032/148‑1 (MQ=255) cccGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCgg > 2:2694792/1‑148 (MQ=255) cccGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCgg < 1:2517501/148‑1 (MQ=255) cccGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGGGCgg > 2:2772477/1‑148 (MQ=255) cGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTa < 2:1660227/148‑1 (MQ=255) aaTTTTACGACTAATCACGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACg < 2:2331823/148‑1 (MQ=255) aaTTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACg < 1:2712392/148‑1 (MQ=255) ttttACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTg > 1:1974694/1‑148 (MQ=255) ttttACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTg < 2:2868043/148‑1 (MQ=255) tACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCaa < 1:2171964/148‑1 (MQ=255) cGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACg > 1:2658783/1‑148 (MQ=255) gACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGc < 1:928622/148‑1 (MQ=255) aCTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCa < 1:1015871/148‑1 (MQ=255) aCTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCa > 2:1295475/1‑148 (MQ=255) aCTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCa > 1:2148092/1‑148 (MQ=255) aCTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGATTCCTTCGACGATGGCGAGTGGTGCGGTAACGTGCAACGCa > 2:312341/1‑148 (MQ=255) cTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCAt > 1:2358569/1‑148 (MQ=255) aTCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCtt < 2:3100073/148‑1 (MQ=255) tCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTc > 1:1785875/1‑148 (MQ=255) cAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCa < 2:1892210/148‑1 (MQ=255) cAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCa > 2:700728/1‑148 (MQ=255) aGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAAAGTGCAACGCATCTTCAAc < 1:174434/148‑1 (MQ=255) gcgcTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACa > 1:1869046/1‑148 (MQ=255) cgcTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAg > 1:1378298/1‑148 (MQ=255) cTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGa > 2:1116728/1‑148 (MQ=255) ccGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCa > 2:2535958/1‑148 (MQ=255) gCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATg < 1:2775632/148‑1 (MQ=255) cAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGc < 1:666451/148‑1 (MQ=255) gAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCtt < 1:743275/148‑1 (MQ=255) gAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCtt < 2:1004843/148‑1 (MQ=255) aTTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCtttt > 1:1033038/1‑148 (MQ=255) tttGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTg < 2:1273778/148‑1 (MQ=255) tttGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTg > 1:121018/1‑148 (MQ=255) ttGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCtgttgt > 2:684392/1‑148 (MQ=255) aGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGa < 2:780728/148‑1 (MQ=255) gCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGAt > 2:2145401/1‑148 (MQ=255) cAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATc < 1:425394/148‑1 (MQ=255) aGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCg < 1:308655/148‑1 (MQ=255) ggTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGt < 2:1974694/148‑1 (MQ=255) gTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTa > 2:555176/1‑148 (MQ=255) gTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTa < 2:3293632/148‑1 (MQ=255) gTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTa < 2:393948/148‑1 (MQ=255) gTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTa < 2:607572/148‑1 (MQ=255) aTGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGc > 1:1882809/1‑148 (MQ=255) gAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCgg > 1:1128199/1‑148 (MQ=255) gAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCgg > 1:2051238/1‑148 (MQ=255) gAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCgg > 2:829073/1‑148 (MQ=255) aTAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGcc > 1:2267895/1‑148 (MQ=255) tAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCa > 2:46351/1‑148 (MQ=255) aaaaaTAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCAc > 2:2118240/1‑148 (MQ=255) aaaTAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGt > 2:1552933/1‑148 (MQ=255) aaTAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTa > 2:3004074/1‑148 (MQ=255) aaTAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTa > 1:2615749/1‑148 (MQ=255) aGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACaa < 2:3060381/148‑1 (MQ=255) aGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGAACaa > 2:2301165/1‑148 (MQ=255) gAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAAt < 1:239484/148‑1 (MQ=255) gCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTcc < 1:985605/148‑1 (MQ=255) gCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTcc < 1:1491538/148‑1 (MQ=255) aaaGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGa > 1:2890604/1‑148 (MQ=255) aaaGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGa > 1:2891528/1‑148 (MQ=255) aaaGATGCCAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGa > 1:2720350/1‑148 (MQ=255) aGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGAcc > 1:1055090/1‑148 (MQ=255) aGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGAcc > 2:2590353/1‑148 (MQ=255) gATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCt > 2:529207/1‑148 (MQ=255) gATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCt > 1:157745/1‑148 (MQ=255) tGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTgg > 1:1553338/1‑148 (MQ=255) tGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTgg < 1:2951008/148‑1 (MQ=255) cAACTCCAGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGgcgc > 1:2561830/1‑148 (MQ=255) aCTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAg < 2:1159652/148‑1 (MQ=255) aGCCACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAGAtttt < 1:829073/148‑1 (MQ=255) cACTTTTAATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAGATTTTCCg < 1:2042880/148‑1 (MQ=255) aCTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAGATTTTCCgc > 2:1487020/1‑147 (MQ=255) | TCGGTGCGGGCATAAAATGCTTCGGCTACTTGCCGCGTTAATCCTCCCGCAATTTTACGACTAATCAAGCGCTCCCGCAGAATTTGAGCAGGTGCATGAATAAAAATAGAAAAATCGCAGAAAGATGCCAACTCCAGCCACTTTTCATCATCCAGTAACAACCAGTTTCCTTCGACGATGACGAGTGGTGCGGTAACGTGCAACGCATCTTCAACAGGATCATGCTTTTGTCGATCGTACTGCGGCCACGTACAATCCCCTTCCACGACCTGGCGCAGATTTTCCGTC > CP009273/3067429‑3067716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |