| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,135,129 | T→A | 9.9% | K407I (AAA→ATA) | hybC ← | hydrogenase 2, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,135,129 | 0 | T | A | 9.9% | 552.0 / 43.0 | 190 | K407I (AAA→ATA) | hybC | hydrogenase 2, large subunit |
| Reads supporting (aligned to +/- strand): ref base T (78/93); new base A (9/10); total (87/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GTGATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCCGTCGT > CP009273/3134984‑3135276 | gATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTg > 2:1927694/1‑148 (MQ=255) aTCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGa < 1:107393/148‑1 (MQ=255) aTCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGa < 1:2600130/148‑1 (MQ=255) tCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGAt < 2:1373636/148‑1 (MQ=255) gCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATaa > 1:2249615/1‑148 (MQ=255) ccTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATaaa < 2:2151149/148‑1 (MQ=255) cTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAAt < 2:2630566/148‑1 (MQ=255) cTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAAt < 1:3202577/148‑1 (MQ=255) tttGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTT‑CAGCGTGTTGCCAGTCAGTTTCTGATAAATCg > 2:2623513/1‑148 (MQ=255) gCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCa < 2:287431/148‑1 (MQ=255) ccGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCaa > 2:3298405/1‑148 (MQ=255) gATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACg < 2:989213/148‑1 (MQ=255) gATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACg > 2:932448/1‑148 (MQ=255) gATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACg < 2:1289868/148‑1 (MQ=255) tatTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAt > 2:1944799/1‑148 (MQ=255) tatTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAt > 2:3095525/1‑148 (MQ=255) ttGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAttt > 1:2233736/1‑148 (MQ=255) ttGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAttt < 2:1204101/148‑1 (MQ=255) tGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttc > 1:2021828/1‑148 (MQ=255) tGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATttcatt < 1:1811043/148‑1 (MQ=255) tCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAg < 1:983526/148‑1 (MQ=255) cAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGt < 1:958052/148‑1 (MQ=255) gTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGttt > 1:2833834/1‑148 (MQ=255) gTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGttt < 2:425895/148‑1 (MQ=255) aCTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTc < 2:2701026/148‑1 (MQ=255) aCTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTc < 1:2130177/148‑1 (MQ=255) aCTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTc < 2:1537243/148‑1 (MQ=255) aCTGTATTGGTTGTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTc < 1:3031756/148‑1 (MQ=255) cTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCt > 1:1029560/1‑148 (MQ=255) tGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTg > 1:14435/1‑148 (MQ=255) tGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTTGGTAg > 1:74541/1‑148 (MQ=255) tGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAg > 1:1704168/1‑148 (MQ=255) gTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGAt < 2:3215467/148‑1 (MQ=255) gTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGAt < 2:946234/148‑1 (MQ=255) ttttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGAtt < 2:2810500/148‑1 (MQ=255) ttttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTAATTCAGTTTGTTCTGGGTAGAtt < 1:1206251/148‑1 (MQ=255) tttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTc > 1:1701830/1‑148 (MQ=255) gCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTcgcg < 2:2731886/148‑1 (MQ=255) gCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTcgcg < 2:278567/148‑1 (MQ=255) aGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGAc < 1:717825/148‑1 (MQ=255) ggATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGAcc < 1:2665914/148‑1 (MQ=255) atatCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTg > 2:2359017/1‑148 (MQ=255) atatCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTg < 2:638834/148‑1 (MQ=255) atCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTgcc > 2:1862988/1‑148 (MQ=255) ccTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTgccgc < 2:2828302/148‑1 (MQ=255) tGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCa > 1:374882/1‑148 (MQ=255) tGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCa < 2:1117896/148‑1 (MQ=255) tGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCa > 1:374789/1‑148 (MQ=255) tGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCa < 1:1375863/148‑1 (MQ=255) cAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGt > 1:856266/1‑148 (MQ=255) cAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGt > 2:1010571/1‑148 (MQ=255) aaTTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGtt < 1:302348/148‑1 (MQ=255) aTTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGttt > 1:1429199/1‑148 (MQ=255) ttCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTc > 2:699257/1‑148 (MQ=255) tCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCa > 1:63730/1‑148 (MQ=255) cacaGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCAc < 1:359138/148‑1 (MQ=255) cagcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCa > 1:2353012/1‑148 (MQ=255) cagcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTATGTTCTGGGTAGATTCGCGACCTGCCGCCAGTGTCACCa > 2:1763252/1‑148 (MQ=255) cagcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCa > 2:2689070/1‑148 (MQ=255) gcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGc > 1:1753251/1‑148 (MQ=255) gcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGc < 2:2077907/148‑1 (MQ=255) cagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCa > 1:1563764/1‑148 (MQ=255) gTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCata < 1:1285607/148‑1 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCatat > 1:2856179/1‑148 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCatat > 1:2861609/1‑148 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCatat > 1:2649069/1‑148 (MQ=255) gAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATAtt > 2:2985647/1‑148 (MQ=255) cGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGc < 1:2948874/148‑1 (MQ=255) cGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGc < 1:1292898/148‑1 (MQ=255) gTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCa < 1:321974/148‑1 (MQ=255) tACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAg > 1:2777447/1‑148 (MQ=255) aCCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGc > 1:1479472/1‑148 (MQ=255) ataataCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCa < 2:3040121/148‑1 (MQ=255) cAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGtt < 2:625820/148‑1 (MQ=255) cAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGtt < 1:1570626/148‑1 (MQ=255) gAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGt > 1:2669776/1‑148 (MQ=255) aGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTa > 2:56003/1‑148 (MQ=255) gTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAg < 1:2585292/148‑1 (MQ=255) gCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGaa > 2:3110702/1‑148 (MQ=255) aGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAg < 2:1497831/148‑1 (MQ=255) gCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGt > 2:2435420/1‑148 (MQ=255) gCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGt < 2:657108/148‑1 (MQ=255) cTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTc > 2:2596473/1‑148 (MQ=255) gtgCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTCGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCgg < 2:2141474/148‑1 (MQ=255) ttCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTc < 1:2353405/148‑1 (MQ=255) tCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCa < 2:1820184/148‑1 (MQ=255) ccAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCAc < 2:74487/148‑1 (MQ=255) ccAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCAc < 2:74546/148‑1 (MQ=255) cAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCAcc < 2:2960541/148‑1 (MQ=255) cAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCAcc < 2:2249615/148‑1 (MQ=255) gCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCa > 1:1919799/1‑148 (MQ=255) gCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCa > 1:331379/1‑148 (MQ=255) tgtTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGa < 1:2587894/148‑1 (MQ=255) gtTGCCAGTCATTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGaa < 2:556905/148‑1 (MQ=255) cagtcagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATAttt > 1:123448/1‑148 (MQ=255) cagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcg > 1:1354830/1‑148 (MQ=255) cagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcg > 2:2027911/1‑148 (MQ=255) agtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgt < 1:307358/148‑1 (MQ=255) tttCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtcg > 2:270941/1‑148 (MQ=255) ttCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtcgt < 2:1701830/148‑1 (MQ=255) | GTGATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCCGTCGT > CP009273/3134984‑3135276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |