| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,153,033 | C→A | 9.4% | L491L (CTG→CTT) | ygiQ ← | Radical SAM superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,153,033 | 0 | C | A | 9.4% | 758.9 / 32.7 | 216 | L491L (CTG→CTT) | ygiQ | Radical SAM superfamily protein |
| Reads supporting (aligned to +/- strand): ref base C (93/102); new base A (9/12); total (102/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 221 total aligned reads displayed.
CATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGC > CP009273/3152886‑3153180 | cATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATc < 2:2414757/148‑1 (MQ=255)cATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATc > 1:1683668/1‑148 (MQ=255) tGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAg > 1:2409873/1‑148 (MQ=255) ccGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGAt < 2:1317740/148‑1 (MQ=255) ccGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGAt < 1:2657241/148‑1 (MQ=255) cGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATc < 2:2667007/148‑1 (MQ=255) ggCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCt > 2:2910306/1‑148 (MQ=255) ggCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCt < 2:1829224/148‑1 (MQ=255) gCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCtt > 2:2262858/1‑148 (MQ=255) cTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCttt < 1:2257662/148‑1 (MQ=255) tcatcaTCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCttttt < 2:684768/148‑1 (MQ=255) tcatcaTCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCttttt > 2:3157111/1‑148 (MQ=255) catcatCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTa > 2:1190537/1‑148 (MQ=255) atcatcTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTaa < 2:1802492/148‑1 (MQ=255) tcatcTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAAt > 1:1445617/1‑148 (MQ=255) tCGATACCGGCCCTTCTTCGGTCTGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAAGGCCttt < 2:2907030/148‑1 (MQ=255) tCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCttt < 2:1343311/148‑1 (MQ=255) cGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTc < 1:2342608/148‑1 (MQ=255) cGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTc < 2:2967153/148‑1 (MQ=255) aTAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTc < 2:2227399/146‑1 (MQ=255) aTAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAg < 2:2849206/148‑1 (MQ=255) ttcttcGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCa > 1:1576054/1‑148 (MQ=255) ttcttcGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCa < 1:1182384/148‑1 (MQ=255) ttcGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACgg < 1:3138406/148‑1 (MQ=255) ggTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGa < 2:499411/148‑1 (MQ=255) aTGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATag < 1:219289/148‑1 (MQ=255) aTGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATag < 1:379872/148‑1 (MQ=255) gTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATagag < 1:1360097/148‑1 (MQ=255) gTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATagag < 1:444999/148‑1 (MQ=255) ttCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTCATGCCTTTCAGATCACGCGCACGGCGATAGAgg < 1:3157111/148‑1 (MQ=255) tCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGt > 1:102016/1‑148 (MQ=255) gggCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGAt > 1:1837995/1‑148 (MQ=255) ggCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATc > 2:2725612/1‑148 (MQ=255) ggCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATc > 1:458717/1‑148 (MQ=255) ggCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATc > 1:72779/1‑148 (MQ=255) gCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCg < 1:2109326/148‑1 (MQ=255) cAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGt > 1:2200810/1‑148 (MQ=255) aaTCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGtt < 2:2695126/148‑1 (MQ=255) tCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtgg > 1:903115/1‑148 (MQ=255) cTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggt > 2:3258473/1‑148 (MQ=255) cTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggt < 2:2552432/148‑1 (MQ=255) ttCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGTATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTAAGATCACGCGCACGGCGAGAGAGGTTGATCGTtggtt > 2:3109596/1‑148 (MQ=255) ttCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggtt < 2:877006/148‑1 (MQ=255) cAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcg < 1:1916831/148‑1 (MQ=255) gATAACCGCCGACGTGATGGGTCGCCAGTTATTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtg < 1:2299255/148‑1 (MQ=255) aTAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtgg > 1:2674056/1‑148 (MQ=255) tAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggt < 1:831232/148‑1 (MQ=255) tAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggt < 2:52833/148‑1 (MQ=255) aaCCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggtt < 2:2514331/148‑1 (MQ=255) aCCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggttc > 1:1507385/1‑148 (MQ=255) aCCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggttc > 1:321911/1‑148 (MQ=255) aCCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTtggttcgtggttc < 2:343623/148‑1 (MQ=255) gACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTcc < 2:1644361/148‑1 (MQ=255) cGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCAt > 1:1409058/1‑148 (MQ=255) gTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCAtg < 2:691453/148‑1 (MQ=255) gATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCAtgtg > 2:2459603/1‑148 (MQ=255) aTGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGc > 1:2788221/1‑148 (MQ=255) tGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCg > 2:2881138/1‑148 (MQ=255) ggTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGa > 1:1192313/1‑148 (MQ=255) ccAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAat < 1:2977131/148‑1 (MQ=255) ccAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAat < 2:3221943/148‑1 (MQ=255) cAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAata > 2:1427150/1‑148 (MQ=255) aGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAatat > 2:2593892/1‑148 (MQ=255) gTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATc > 1:112668/1‑148 (MQ=255) gTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATc < 1:1000122/148‑1 (MQ=255) ttGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGAt < 2:173852/148‑1 (MQ=255) gATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATaa < 1:2060933/148‑1 (MQ=255) gATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATaa < 2:262402/148‑1 (MQ=255) gATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATaa < 2:3165282/148‑1 (MQ=255) tataGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAAc > 1:2875582/1‑148 (MQ=255) gcgGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGa < 1:1049836/148‑1 (MQ=255) cgGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGAc > 1:791212/1‑148 (MQ=255) gATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACaa < 1:3069659/148‑1 (MQ=255) gATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGACAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACaa < 2:401291/148‑1 (MQ=255) aTCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACaaa < 2:1556477/148‑1 (MQ=255) tcttctACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAAc > 2:559235/1‑148 (MQ=255) ttctACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACgg < 1:976315/148‑1 (MQ=255) gCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACaaa < 2:1449925/148‑2 (MQ=255) gCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAg < 1:2606356/148‑1 (MQ=255) gCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAg > 1:2680949/1‑148 (MQ=255) gCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAg < 2:1683668/148‑1 (MQ=255) cTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAACCGCACGACAAACGGCGACAAGt < 1:872799/148‑1 (MQ=255) aTGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATAGCCGGATAAACGCACGACAAACGGCGACAAGttt > 1:1960226/1‑148 (MQ=255) aTGTCATAACGCACACCAGAGGCAATAAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGttt > 2:1040820/1‑148 (MQ=255) tGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTg < 2:1021865/148‑1 (MQ=255) tGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTg < 2:3022205/148‑1 (MQ=255) tAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAg > 2:213746/1‑148 (MQ=255) tAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAg > 1:2720707/1‑148 (MQ=255) gCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGcgcg < 2:2066376/148‑1 (MQ=255) cacCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTgg > 1:645801/1‑148 (MQ=255) ccAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCg < 2:1165414/148‑1 (MQ=255) cAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGa < 1:1308617/148‑1 (MQ=255) agagGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt < 1:1064906/148‑1 (MQ=255) agagGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt < 2:2276727/148‑1 (MQ=255) agagGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt > 1:605676/1‑148 (MQ=255) agagGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt < 2:2277479/148‑1 (MQ=255) agagGCAATCAGGATCTTTTTAAAGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt > 1:1672374/1‑148 (MQ=255) ggCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTg > 2:2074194/1‑148 (MQ=255) ggCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTg > 2:2283124/1‑148 (MQ=255) gCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGc > 2:2027691/1‑148 (MQ=255) | CATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTTCAGATAACCGCCGACGTGATGGGTCGCCAGTTCTTTGATATAGCGCGGATCTTCTACGGCTATGTCATAACGCACACCAGAGGCAATCAGGATCTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGC > CP009273/3152886‑3153180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |