| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,337,824 | C→A | 14.5% | I174I (ATC→ATA) | lptB → | lipopolysaccharide export ABC transporter ATP‑binding protein of the LptBFGC export complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,337,824 | 0 | C | A | 14.5% | 500.6 / 42.6 | 162 | I174I (ATC→ATA) | lptB | lipopolysaccharide export ABC transporter ATP‑binding protein of the LptBFGC export complex |
| Reads supporting (aligned to +/- strand): ref base C (71/66); new base A (12/12); total (83/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
CACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAA > CP009273/3337678‑3337971 | cacaTTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCg < 1:2371063/148‑1 (MQ=255) acaTTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGa < 2:2613085/148‑1 (MQ=255) acaTTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGa < 2:2613099/148‑1 (MQ=255) acaTTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGa > 2:693790/1‑148 (MQ=255) aGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTaa > 1:1232867/1‑148 (MQ=255) aGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTaa < 1:3218656/148‑1 (MQ=255) gCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTaaa < 1:192174/148‑1 (MQ=255) cACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAAc > 2:2689723/1‑148 (MQ=255) ccTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGc < 2:850306/148‑1 (MQ=255) gTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGcatcat < 1:2735765/148‑1 (MQ=255) cAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAg > 1:3118326/1‑148 (MQ=255) ggggCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTg < 2:3312681/148‑1 (MQ=255) ggggCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTg < 2:3310519/148‑1 (MQ=255) gggCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTgc > 2:1921350/1‑148 (MQ=255) tCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACa > 2:2854808/1‑148 (MQ=255) cACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTTTCGACATTAAACGCATCATTGAGCACCTGCGCGACAg < 2:409527/148‑1 (MQ=255) aCTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGc > 1:894111/1‑148 (MQ=255) aCTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGc > 1:1761507/1‑148 (MQ=255) ctctCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCg < 2:796415/148‑1 (MQ=255) tctcCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCgg > 1:1084225/1‑148 (MQ=255) ctcCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGc < 2:2271073/148‑1 (MQ=255) tcCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGcc < 1:1642827/148‑1 (MQ=255) tcCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGcc < 1:45921/148‑1 (MQ=255) ccGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCt > 2:3217377/1‑148 (MQ=255) ccGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCt < 2:3081527/148‑1 (MQ=255) gggggTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTgg < 1:2110315/148‑1 (MQ=255) ggggTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTggg < 1:1459457/148‑1 (MQ=255) ggTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCg < 2:1436528/148‑1 (MQ=255) tGAACGTCGCCGTGTAGAACTTGCGCGCGCACTGGCTGCGAATCCGAATTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACTTTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTg < 2:1726040/148‑1 (MQ=255) aaCGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCt > 2:773002/1‑148 (MQ=255) aaCGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCt > 2:773175/1‑148 (MQ=255) aCGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTg > 1:535404/1‑148 (MQ=255) cGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGa > 2:595473/1‑148 (MQ=255) gTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGAt < 1:1257933/148‑1 (MQ=255) gtgtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGa < 2:15787/148‑1 (MQ=255) tgtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAc > 2:1506766/1‑148 (MQ=255) tgtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAc > 2:792368/1‑148 (MQ=255) tgtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAc > 2:781776/1‑148 (MQ=255) gtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAcc > 2:2081902/1‑148 (MQ=255) gtAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAcc > 2:2081831/1‑148 (MQ=255) tAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACca > 1:457370/1‑148 (MQ=255) gAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACcaca < 1:2702341/148‑1 (MQ=255) aaaTTGCCCGCGCACTGGCTTCGTATCCGAAATTTATTCTGCTCGACGAACGGTTTGCCGGGTTTGACCCGATCTCGGTTTTCGACATTAAACTCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACcacat < 2:103682/148‑2 (MQ=255) aaaTTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACaa > 2:2159402/1‑148 (MQ=255) aaaTTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACaa < 2:103738/148‑1 (MQ=255) aaaTTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACaa > 2:2803193/1‑148 (MQ=255) aTTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcg < 1:861766/148‑1 (MQ=255) ttGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgt > 2:1258417/1‑148 (MQ=255) ttGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgt > 2:3176572/1‑148 (MQ=255) tGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgtg < 1:1665879/148‑1 (MQ=255) cgcgCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgtgcgtg > 2:1195634/1‑148 (MQ=255) cACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAac > 2:991920/1‑148 (MQ=255) aCTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAaca < 1:153972/148‑1 (MQ=255) cTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac > 2:1871150/1‑148 (MQ=255) cTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac > 2:200935/1‑148 (MQ=255) ggCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTg < 2:1438325/148‑1 (MQ=255) ggCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTg > 1:2353239/1‑148 (MQ=255) cTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGc > 2:2294660/1‑148 (MQ=255) cTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGc > 2:2294318/1‑148 (MQ=255) gCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCgg < 2:1947877/148‑1 (MQ=255) gCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCgg < 2:894111/148‑1 (MQ=255) gCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCgg < 1:693790/148‑1 (MQ=255) cGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGt < 2:3073175/148‑1 (MQ=255) cGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGt > 1:2747460/1‑148 (MQ=255) gAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGtt < 2:3106883/148‑1 (MQ=255) gAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGtt < 2:3104730/148‑1 (MQ=255) aTCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTtg < 2:368502/148‑1 (MQ=255) aTCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTtg < 2:121679/148‑1 (MQ=255) aTCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTtg < 2:1599525/148‑1 (MQ=255) ccGAAATTTAATCAGCTCGACGAACCGTTTGCCTGGGTTGACCCGATCTCGCATATCGACATTAAACGCATCATTGAGCACCAGCTCGACAGCGGCCTGGGCGAGCTCATCACAGACCACAACGTGCGTGAAAAACTGGCGGTAtgtg > 1:2763799/1‑148 (MQ=255) aTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgc > 1:2349376/1‑148 (MQ=255) aTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgc > 2:1028158/1‑148 (MQ=255) tttATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgcg > 2:2890366/1‑148 (MQ=255) ttCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTta < 2:1419625/148‑1 (MQ=255) tCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtat > 1:3035884/1‑148 (MQ=255) tCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtat > 1:658050/1‑148 (MQ=255) tCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtat < 1:2143164/148‑1 (MQ=255) cTGCTCGACGAACCGTTTGCCGGGGGTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtata < 2:2090647/148‑1 (MQ=255) cTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCg > 1:2144494/1‑148 (MQ=255) tCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgt < 2:647057/148‑1 (MQ=255) cgacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtc > 2:1240218/1‑148 (MQ=255) cgacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtc > 2:2979570/1‑148 (MQ=255) aCCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGtcagtcag > 2:1291176/1‑148 (MQ=255) ccGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAgg < 1:252179/148‑1 (MQ=255) ccGTTTGCCGGGGTTGACCCGATCTCGGTTATAGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAgg < 2:1761507/148‑1 (MQ=255) tttGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGc > 2:2756844/1‑148 (MQ=255) tttGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGc > 1:1886763/1‑148 (MQ=255) ttGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCa < 2:567083/148‑1 (MQ=255) tGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCAt < 1:2567835/148‑1 (MQ=255) gggTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGAt < 1:1332646/148‑1 (MQ=255) ttGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGc > 1:1203165/1‑148 (MQ=255) tctcGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCAc > 1:1307718/1‑148 (MQ=255) tctcGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCAc > 1:1307503/1‑148 (MQ=255) tcGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGc < 1:1017861/148‑1 (MQ=255) cGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGcc < 1:991920/148‑1 (MQ=255) cGGTTATCGACATTAAACGCATCAGTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGcc < 2:2051610/148‑1 (MQ=255) cGGTGATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGcc < 2:610009/148‑1 (MQ=255) aTCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAg < 2:902861/148‑1 (MQ=255) tCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGa > 2:1507303/1‑148 (MQ=255) cGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGaa < 1:1591185/148‑1 (MQ=255) | CACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAA > CP009273/3337678‑3337971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |