Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,470,272 C→A 88.8% V169V (GTG→GTT fkpA ← FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,470,2720CA88.8% 530.3 / 63.7 215V169V (GTG→GTTfkpAFKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase)
Reads supporting (aligned to +/- strand):  ref base C (13/11);  new base A (110/81);  total (123/92)
Fisher's exact test for biased strand distribution p-value = 8.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 216 total aligned reads displayed.

AACCAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATCAG  >  CP009273/3470125‑3470414
                                                                                                                                                   |                                                                                                                                              
 aCCAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCa                                                                                                                                               <  2:1107271/148‑1 (MQ=255)
 aCCAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCa                                                                                                                                               <  2:1970511/148‑1 (MQ=255)
   cAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACt                                                                                                                                             >  2:1655264/1‑148 (MQ=255)
   cAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACt                                                                                                                                             >  1:770212/1‑148 (MQ=255)
      tttGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTaca                                                                                                                                          <  2:1698215/148‑1 (MQ=255)
         gATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTacaaca                                                                                                                                       <  1:3086143/148‑1 (MQ=255)
          aTCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAg                                                                                                                                      <  2:1779409/148‑1 (MQ=255)
           tCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGt                                                                                                                                     <  1:1002041/148‑1 (MQ=255)
           tCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGt                                                                                                                                     <  2:243732/148‑1 (MQ=255)
            cTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTa                                                                                                                                    <  1:2493912/148‑1 (MQ=255)
              tACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATc                                                                                                                                  >  2:1179121/1‑148 (MQ=255)
              tACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATc                                                                                                                                  >  1:1825989/1‑148 (MQ=255)
                ccGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGc                                                                                                                                >  2:263863/1‑148 (MQ=255)
                 cGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAATACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCt                                                                                                                               >  2:1516641/1‑148 (MQ=255)
                   ccTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGt                                                                                                                             >  1:610857/1‑148 (MQ=255)
                   ccTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGt                                                                                                                             >  1:2649783/1‑148 (MQ=255)
                   ccTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGt                                                                                                                             <  1:715699/148‑1 (MQ=255)
                   ccTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGt                                                                                                                             >  1:774233/1‑148 (MQ=255)
                    cTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTc                                                                                                                            >  1:3181667/1‑148 (MQ=255)
                    cTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTc                                                                                                                            >  1:1539591/1‑148 (MQ=255)
                        cTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTc                                                                                                                        >  2:2680485/1‑148 (MQ=255)
                          tGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCgg                                                                                                                      <  2:1679643/148‑1 (MQ=255)
                             tGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGc                                                                                                                   >  2:3212984/1‑148 (MQ=255)
                              gTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCt                                                                                                                  >  2:398229/1‑148 (MQ=255)
                              gTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCt                                                                                                                  <  1:2401446/148‑1 (MQ=255)
                              gTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCt                                                                                                                  <  1:2685674/148‑1 (MQ=255)
                                   tcAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGcc                                                                                                             >  1:3027486/1‑148 (MQ=255)
                                    cAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCt                                                                                                            <  1:1467683/148‑1 (MQ=255)
                                       aCCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTa                                                                                                         >  1:2296795/1‑148 (MQ=255)
                                       aCCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTa                                                                                                         <  2:517048/148‑1 (MQ=255)
                                       aCCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTa                                                                                                         <  2:853380/148‑1 (MQ=255)
                                       aCCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTa                                                                                                         <  2:773843/148‑1 (MQ=255)
                                           tCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCgg                                                                                                     >  1:1390509/1‑148 (MQ=255)
                                                ccAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTct                                                                                                >  1:502818/1‑148 (MQ=255)
                                                ccAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTct                                                                                                >  2:3306417/1‑148 (MQ=255)
                                                ccAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTct                                                                                                >  1:3202938/1‑148 (MQ=255)
                                                   aCCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTctact                                                                                             >  2:1979568/1‑148 (MQ=255)
                                                     ccGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCtactac                                                                                           >  2:710169/1‑148 (MQ=255)
                                                      cGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTAcc                                                                                          >  2:1648199/1‑148 (MQ=255)
                                                         gATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGa                                                                                       <  1:1132848/148‑1 (MQ=255)
                                                          aTAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGAt                                                                                      >  2:3104120/1‑148 (MQ=255)
                                                             acacCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTAGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATaaa                                                                                   >  2:360754/1‑148 (MQ=255)
                                                             acacCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATAATAGTACCTTTGAATTTAACTAAAAAAGTAAAGCTGTCTTTCGGTGCTTAGCCTTTACCCGCTACTACTAACTGATaaa                                                                                   >  1:93035/1‑148 (MQ=255)
                                                                ccGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAacca                                                                                >  1:256116/1‑148 (MQ=255)
                                                                ccGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAacca                                                                                >  1:215364/1‑148 (MQ=255)
                                                                ccGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAacca                                                                                <  1:2916662/148‑1 (MQ=255)
                                                                  gTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAaccaga                                                                              <  2:547253/148‑1 (MQ=255)
                                                                   tCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAaccagac                                                                             >  1:2826627/1‑148 (MQ=255)
                                                                    ccAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAaccagacc                                                                            >  1:397594/1‑148 (MQ=255)
                                                                        aCGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGtt                                                                        <  1:1244061/148‑1 (MQ=255)
                                                                        aCGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCATTGTAGTTAAATACAACAGAAACGCTGTCTTTCGGTGCATAGCCATTAACGGCTTCTAATAACTTATAAaccagaccaata                                                                        >  1:928814/1‑145 (MQ=255)
                                                                           gaaagaaaGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGaa                                                                     >  2:244962/1‑148 (MQ=255)
                                                                            aaagaaagCGGTTCACCACGGGTGTACGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTTTAGTTAACTACAAAAGTATCGCTGTCTTTCTGTGCATCGCCTTTACCGGCTTCTACTACATGATAAACAAGAACAGTTGAag                                                                    >  1:905314/1‑148 (MQ=255)
                                                                            aaagaaagCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGTag                                                                    >  1:98960/1‑148 (MQ=255)
                                                                            aaagaaagCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAag                                                                    >  1:1649897/1‑148 (MQ=255)
                                                                            aaagaaagCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCGTCTACTACCTGATAAACCAGACCAGTTGAag                                                                    >  1:27562/1‑148 (MQ=255)
                                                                               gaaagCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAgg                                                                 >  1:345474/1‑148 (MQ=255)
                                                                                   gCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGtttt                                                             <  1:2358200/148‑1 (MQ=255)
                                                                                      gTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTcac                                                          >  2:1589094/1‑148 (MQ=255)
                                                                                         caccacGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACAcc                                                       <  2:493568/148‑1 (MQ=255)
                                                                                              cGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTtct                                                  <  2:256116/148‑1 (MQ=255)
                                                                                              cGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTtct                                                  <  2:3202938/148‑1 (MQ=255)
                                                                                                 gtgtAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCtt                                               <  2:2616113/148‑1 (MQ=255)
                                                                                                 gtgtAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCtt                                               <  2:2262230/148‑1 (MQ=255)
                                                                                                 gtgtAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCtt                                               <  1:2783945/148‑1 (MQ=255)
                                                                                                     aaGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACGATTGTAGTTAACTACAACAGTATCGCTGTGTTTCGGNGCTTCGGCTTTACCGGCTTCTACTACCTGTTAAACCAGACCAGTTGAAGAGGTTTTGACACCGTTGTCTTTggg                                           >  1:1678058/1‑147 (MQ=255)
                                                                                                       gagTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCaa                                         >  1:2606672/1‑148 (MQ=255)
                                                                                                         gTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAAt                                       <  2:1825989/148‑1 (MQ=255)
                                                                                                           tGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAAttt                                     <  1:398198/148‑1 (MQ=255)
                                                                                                              cGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTtctc                                  <  2:237732/148‑1 (MQ=255)
                                                                                                                 aCTCTTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTcgcg                               >  2:1202212/1‑148 (MQ=255)
                                                                                                                  ctctTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCgg                              >  2:2391728/1‑148 (MQ=255)
                                                                                                                  ctctTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCGTTCTCTTTGGCAAATTTCTCGCgg                              >  1:2206205/1‑148 (MQ=255)
                                                                                                                  ctctTTACCGTCGATCAGCGTACCTTTGTAGTTAACTAAAACAGTATAGCTGTCTTTAGGTGCTTAGCCTTTACCGGCTTCAACTAACTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCACTTTTGCAAATTTCTCGAgg                              >  2:2704631/1‑148 (MQ=255)
                                                                                                                    ctTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTa                            <  1:1846411/148‑1 (MQ=255)
                                                                                                                    ctTTACCGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTa                            >  2:2856817/1‑148 (MQ=255)
                                                                                                                          cGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCttt                      <  1:1655264/148‑1 (MQ=255)
                                                                                                                          cGTCGATCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCttt                      <  1:1179133/148‑1 (MQ=255)
                                                                                                                               aTCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCtt                 >  1:1596247/1‑148 (MQ=255)
                                                                                                                               aTCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCtt                 >  2:883295/1‑148 (MQ=255)
                                                                                                                               aTCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCtt                 <  1:2680789/148‑1 (MQ=255)
                                                                                                                                tCAGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTAACCGGCTTCTACAACCTGATAAACCAGACCAGTTGAAGAGGTTTTCAAACCATTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCttt                >  1:869872/1‑148 (MQ=255)
                                                                                                                                  aGCGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTg              <  2:1344093/148‑1 (MQ=255)
                                                                                                                                   gCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGc             >  2:2526534/1‑148 (MQ=255)
                                                                                                                                   gCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGc             >  2:3037918/1‑148 (MQ=255)
                                                                                                                                    cGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCt            >  2:2337838/1‑148 (MQ=255)
                                                                                                                                    cGTACCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCt            >  2:2128938/1‑148 (MQ=255)
                                                                                                                                       aCCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCg         >  2:3166873/1‑148 (MQ=255)
                                                                                                                                       aCCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCg         >  1:2482807/1‑148 (MQ=255)
                                                                                                                                       aCCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCg         >  2:1436220/1‑148 (MQ=255)
                                                                                                                                       aCCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCg         >  2:2492605/1‑148 (MQ=255)
                                                                                                                                       aCCTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCGTTCTCTTTGGCAAAGTTCTCGCGGTACTCTTTACCTTTTGCTTCg         <  2:176492/148‑1 (MQ=255)
                                                                                                                                        ccTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGt        <  1:244917/148‑1 (MQ=255)
                                                                                                                                         cTTTGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTtct                                                  <  2:2925981/105‑1 (MQ=255)
                                                                                                                                          tttGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTATCGCGGTAGTCTTTACCTTTTGCTTCGTTa      >  1:373094/1‑148 (MQ=255)
                                                                                                                                           ttGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCATCACCGGCTTCTACTACCAGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTAt     >  1:3249641/1‑148 (MQ=255)
                                                                                                                                            tGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATc    <  2:3058621/148‑1 (MQ=255)
                                                                                                                                            tGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATc    <  1:2855465/148‑1 (MQ=255)
                                                                                                                                            tGTAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATc    <  2:124858/148‑1 (MQ=255)
                                                                                                                                              tAGTTAACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATCAg  >  1:201498/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                              
AACCAGTTTGATCTTACCGCCTTTCTTGATGTTCTTCAGACCTTCTGTCCAACCCGGGATAACACCGTCCAGACGGAAAGAAAGCGGTTCACCACGGGTGTAAGAGTTGTCGAACTCTTTACCGTCGATCAGCGTACCTTTGTAGTTCACTACAACAGTATCGCTGTCTTTCGGTGCTTCGCCTTTACCGGCTTCTACTACCTGATAAACCAGACCAGTTGAAGAGGTTTTCACACCTTTCTCTTTGGCAAATTTCTCGCGGTACTCTTTACCTTTTGCTTCGTTATCAG  >  CP009273/3470125‑3470414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: