| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,483,095 | C→A | 9.2% | V149F (GTT→TTT) | argD ← | bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,483,095 | 0 | C | A | 9.2% | 808.0 / 37.9 | 251 | V149F (GTT→TTT) | argD | bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (116/109); new base A (11/13); total (127/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
GCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTC > CP009273/3482949‑3483242 | ctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTa < 1:980935/148‑1 (MQ=255) tGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTaa > 2:1192261/1‑148 (MQ=255) tGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTaa > 2:1747229/1‑148 (MQ=255) ggATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTaaa < 2:1125155/148‑1 (MQ=255) gATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAAc < 2:2526043/148‑1 (MQ=255) cTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACagcgag < 1:2036959/148‑1 (MQ=255) cAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGACTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGTCTGCCCACCCACCGAAACGGTCAACagcgagcg > 2:1734849/1‑148 (MQ=255) aaCCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAgcgagcga > 1:2990600/1‑148 (MQ=255) aaCCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCAGGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAgcgagcga > 1:1154813/1‑148 (MQ=255) accaccaccGCACGGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGACCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGAc > 2:2305881/1‑148 (MQ=255) accaccaccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGAc > 2:3286692/1‑148 (MQ=255) accaccaccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGAc < 1:2800511/148‑1 (MQ=255) ccaccaccGCACCGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAACGCCGTCGTAATATTTTGGCTGCCCACCCACCGAAAGGGTAAACAGCGCGCGAcc < 2:1414658/148‑1 (MQ=255) caccaccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCa > 1:216645/1‑148 (MQ=255) caccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGa > 2:2812822/1‑148 (MQ=255) ccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCTGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGaaa < 2:1318969/148‑1 (MQ=255) gCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGACCGTGGTTGTTGTCTGCCGGTTTCGGCCCAAAGCCGGCGTAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAg < 1:899189/148‑1 (MQ=255) cacaGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGc > 1:545087/1‑148 (MQ=255) ccggTGTGATCATCCATCACCGCTTTCACGGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCCCCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGt < 2:1970792/146‑1 (MQ=255) caGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAACGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGt < 2:2190219/148‑1 (MQ=255) caGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGTTGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGt < 2:2777006/148‑1 (MQ=255) caGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGt < 1:2429657/148‑1 (MQ=255) ggTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTa < 2:2681505/148‑1 (MQ=255) gtgtGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTAt < 2:1289526/148‑1 (MQ=255) gtgtGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTAt < 2:2749784/148‑1 (MQ=255) tgtgATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATg > 2:1502798/1‑148 (MQ=255) tgATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGa > 2:2415978/1‑148 (MQ=255) atcatcCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAg > 2:169411/1‑148 (MQ=255) atcatcAATCACCGCTTTCACTGCATGGATATCTTTAAAGGGAAGGTGTATGTTGTCTGCCGGTTTCGGCCCAACGCCGTCGTAATATTTTGGCTGCCCACCCACCGAAAGGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAg < 1:2542312/148‑1 (MQ=255) tcatcCATCACCGCTTTCACTGCTTGGATATCGTTAACGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCTAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAgg < 1:950291/148‑1 (MQ=255) tcatcCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAgg > 2:2334434/1‑148 (MQ=255) tcatcCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAgg > 1:2062160/1‑148 (MQ=255) catccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGc > 1:162363/1‑148 (MQ=255) atccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCa < 2:1214576/148‑1 (MQ=255) ccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaat > 1:1693471/1‑148 (MQ=255) catcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaata > 1:1249516/1‑148 (MQ=255) atcACCGCTTTCACTGCTTGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAATGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACTGCGAGCGACCATGAAAAGCGTTATGGAAGGCaataa < 2:2556100/148‑1 (MQ=255) atcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaataa < 2:2939608/148‑1 (MQ=255) tcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaataat < 1:2657002/148‑1 (MQ=255) tcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAACCCGTCGTAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGAACATGAAAAGCGTTATGGAAGGCaataat < 2:1962784/148‑1 (MQ=255) cGCTTTCACTGCATGGAGATCGTTAACGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAACGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTg < 1:1497618/148‑1 (MQ=255) cGCTTTCACTGCATGGAGATCGTAACAGGGACCGTGGATGATGTCTGCCGGTTTCGGCCCAACGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGTTAAACAGCGCGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTg < 1:2509146/148‑1 (MQ=255) cTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGt > 1:659616/1‑148 (MQ=255) tttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtt > 1:2833405/1‑148 (MQ=255) ttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGttt > 2:2644340/1‑148 (MQ=255) cTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaa < 1:771390/148‑1 (MQ=255) cTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaa < 1:1359795/148‑1 (MQ=255) cTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaa > 1:742413/1‑148 (MQ=255) gCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaaag > 2:3107259/1‑146 (MQ=255) tGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGc > 1:2599771/1‑148 (MQ=255) gagaTCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTa > 2:1878473/1‑148 (MQ=255) taTCGTTAAAGGTAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGTAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATg < 1:313968/147‑1 (MQ=255) gaTCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATg < 1:147600/148‑1 (MQ=255) ttAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGca > 1:1068308/1‑148 (MQ=255) ttAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGca > 1:1053627/1‑148 (MQ=255) ttAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGca < 1:1940414/148‑1 (MQ=255) tAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac < 1:820402/148‑1 (MQ=255) tAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac > 1:615541/1‑148 (MQ=255) tAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac > 2:1494727/1‑148 (MQ=255) tAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac > 2:3137461/1‑148 (MQ=255) gggAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAg > 1:2301024/1‑148 (MQ=255) gggAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAg > 1:1798036/1‑148 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCg < 2:3183826/148‑1 (MQ=255) cGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTa < 2:101612/148‑1 (MQ=255) cGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTa < 2:1799278/148‑1 (MQ=255) tGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAAt < 2:2918617/148‑1 (MQ=255) ggATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATg > 2:3021380/1‑148 (MQ=255) ggATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTAAGGAAGGCAATAAATTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATg > 1:879506/1‑148 (MQ=255) tgTCTGCCGGTTTCGGCCCAAAGCCGTCTGAATATTTGGGCTGCCCACCCACGGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGTCTATGACGCACACAGGCGTAATGGCGTGc < 1:455246/148‑1 (MQ=255) tgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGc < 2:1621090/148‑1 (MQ=255) tgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGc < 2:1566918/148‑1 (MQ=255) tCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCa > 2:1498783/1‑148 (MQ=255) gCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGtt > 1:2381515/1‑148 (MQ=255) ccGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGttt > 1:1566137/1‑148 (MQ=255) ggTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTaa > 1:342848/1‑148 (MQ=255) gTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTaaa < 1:1747229/148‑1 (MQ=255) tttCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAg > 1:1717505/1‑148 (MQ=255) ttCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAgg < 1:2477679/148‑1 (MQ=255) ttCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAgg > 2:2181615/1‑148 (MQ=255) cGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCg < 2:623396/148‑1 (MQ=255) ggCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCgg < 1:1762814/148‑1 (MQ=255) cccAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGtt < 2:524910/148‑1 (MQ=255) aaaGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCg > 2:358831/1‑148 (MQ=255) aaaGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCg < 2:1154813/148‑1 (MQ=255) aGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGtt > 1:232215/1‑148 (MQ=255) gCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTa < 1:2148097/148‑1 (MQ=255) cGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGc < 2:2537322/148‑1 (MQ=255) cGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGc < 1:3286692/148‑1 (MQ=255) cGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGc < 1:2931916/148‑1 (MQ=255) cGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTc > 1:2673720/1‑148 (MQ=255) gAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCg > 1:94426/1‑148 (MQ=255) tatTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGc < 1:1192261/148‑1 (MQ=255) tGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAg < 2:1717505/148‑1 (MQ=255) ggCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGt < 1:3085724/148‑1 (MQ=255) cTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTc < 2:2134019/148‑1 (MQ=255) cccaccGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAaca < 1:2246528/148‑1 (MQ=255) cccaccGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAaca > 1:1876630/1‑148 (MQ=255) aaaCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCAcgcg > 2:497439/1‑148 (MQ=255) aaCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGt < 2:1363275/148‑1 (MQ=255) cGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTc > 1:335331/1‑148 (MQ=255) | GCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTC > CP009273/3482949‑3483242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |