| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,498,214 | T→G | 15.1% | intergenic (+72/+80) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,498,214 | 0 | T | G | 15.1% | 137.4 / 4.1 | 94 | intergenic (+72/+80) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (24/53); new base G (6/11); total (30/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAA > CP009273/3498068‑3498361 | aaaCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑Gtt > 2:396040/1‑148 (MQ=255) aCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑Gttgc > 1:2179799/1‑146 (MQ=255) gTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGAGTCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGGATTTTACATCCCGTAC‑GTTCCCCTc > 1:1659647/1‑148 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAAcc < 2:2622134/148‑1 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTGCCCGCCCCCCAAcc > 2:1278199/1‑148 (MQ=39) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTGCCCGCAcccccacc > 2:2618148/1‑143 (MQ=255) aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTGCCCGCCCCCAAAACCactc > 1:3151297/1‑148 (MQ=38) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCGCACCCGAACCCTCTccc > 2:2189914/1‑148 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTTACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTGCCCCCCCCCCAACCCACAcccc > 1:1894652/1‑148 (MQ=38) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGTATTTTACATCCCGTAC‑GTGCCCCCCCCCCAAAaccacaaccc > 1:2125469/1‑141 (MQ=38) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCGCCGCACCCAAACCCACTcccc > 2:3136769/1‑148 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCGCCCCCAAACCCGCAcccc > 2:342035/1‑148 (MQ=39) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCaa < 1:964467/148‑1 (MQ=255) tGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAg < 1:1568454/148‑1 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCACACCCTAACCCACAACCCAAAggg > 2:333091/1‑148 (MQ=39) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAggg < 1:2498053/148‑1 (MQ=255) cgcgCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAgggg < 2:268950/148‑1 (MQ=255) cgcgCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAgggg < 2:268945/148‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTTCCCCCCACCGAAACCACACCCCCAACggggg > 1:1288077/1‑147 (MQ=37) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCg < 2:579869/148‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCg < 2:579921/148‑1 (MQ=255) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAgg < 1:2783232/148‑1 (MQ=255) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCGAACCCTCTCCCCAAAGGGGCGAgg > 2:3019732/1‑148 (MQ=255) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTACCCGCACCCGAACCCACACCCCCAACGGGCGCgg > 2:3019735/1‑148 (MQ=38) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAggg < 2:3177164/148‑1 (MQ=255) aTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAgggg < 1:1074104/148‑1 (MQ=255) tCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGa < 1:430439/148‑1 (MQ=255) cATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCg < 1:1721414/148‑1 (MQ=255) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAACGGGGCGAGGGGACCggt < 2:472641/148‑3 (MQ=255) cACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCGAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTc < 2:2156233/148‑1 (MQ=255) cACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGGTGAATTTTACATCCCGTAC‑GTTGCCCGCCCCCCAAACCGCTCCCCAAACGGGCGGGGGGTCCGTTc > 2:2888163/1‑148 (MQ=37) aCCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCa < 1:2491281/148‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCGCACCCAAACCCTCTACCCCAACGGGCGAGGGGTCCCTGCAg > 2:3129840/1‑148 (MQ=38) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCACACCCAAAACCTATACCCCAAGGGGGGCGGGGGCCCTGCAgggc > 2:2684144/1‑145 (MQ=37) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCACACCCAAACCCGAACCCCAAAAGGGCGTGGGGGCCGGTGTGTACggg > 1:510102/1‑147 (MQ=37) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGa < 2:2809025/148‑1 (MQ=255) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGa < 2:1353480/148‑1 (MQ=255) cTATTGAGAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGa < 2:2809156/148‑1 (MQ=255) caTTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGaa < 2:5777/147‑1 (MQ=255) aTTGATAATAAAAGACATTACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAt < 2:547775/148‑1 (MQ=255) aTTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTACCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAt < 1:2971546/148‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCGCACCCAAACCCACTCCCCAAAGGGGCGGGGGGCCCGGTCAGTACgggaat > 2:1390197/1‑144 (MQ=38) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCACCCCCAAACCCACACCCCCAAGGGGCGAGGGGACCGTTAAGTAAGGAAtt > 2:3011557/1‑148 (MQ=38) taataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGc < 1:3194988/148‑1 (MQ=255) taataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGc < 1:2546585/148‑1 (MQ=255) taataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGc < 1:1178431/148‑1 (MQ=255) aataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCACACCCCAAACCCCACCCCCCACGGGGGGGGGGGCCGGTGAGGAAGGCATTTATCt > 2:960855/1‑148 (MQ=21) aaaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTGCCCCCCCCCAAAACCCCAACCCCAACCGGCGAGGGGCCCCGGCAGTACCGCAATTAACTTgt > 1:2490630/1‑147 (MQ=19) cATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGc < 1:285355/148‑1 (MQ=255) cATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTGCCCCGAACCCAAAAACACACACCAAAAGGGCGAGGGGCCCGGTGACTAACGAAATTATCTTgtcagggg > 2:2808482/1‑141 (MQ=19) aTTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCt < 2:1308256/148‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTa < 2:1572525/148‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTa < 2:1572550/148‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTa < 2:767636/148‑1 (MQ=255) ggCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCACACCCAAAACCACAACCCAAAAGGGCGCGGGGACCCTTAAGTAAGGAATTTAGCATGACGGTGGGATCCaccctg > 2:222876/1‑143 (MQ=25) ggCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCAtt < 1:3031908/148‑1 (MQ=255) ccGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaa < 2:2750582/148‑1 (MQ=255) ggATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAt < 2:1446964/148‑1 (MQ=255) gagaaGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATa < 2:2810170/145‑1 (MQ=255) gacaagaagCGCCAGCATCGCATCCGGCGAAGCTGGCGCGTTGAATTTTACATCCCCTAC‑GGTCCCCTCCCCCTAACCCTCTCCCCACACGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATa < 2:2810160/145‑1 (MQ=255) gATAAGATGCGCCAGCATCGCCTCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATa < 2:1949306/148‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATa < 1:1100489/148‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCGAACCCTCTCCCCACAGGGGCGGGGGGACCGGTGAGTTCGGAATTTAGCTTGTCGGGGGGATCCACCATTAAATa > 2:2061618/1‑148 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:1303729/148‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTACCCACACCCACAACCACTCCCCCAAGGGGCGCGGGGGCCGGTAAGTACCGAATTTAACATTACCGTGCTATCAAGCATTAAATAc > 2:1334883/1‑148 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:322740/148‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:2713501/148‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:1060262/148‑1 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCACACCCAAAACCACACCCCCAAGGGGCGCGGGGGCCCGGGAGTACGGCCGTTAGCTTGACGGGGGTATCCACCCTTAAATAcatgg > 2:2459625/1‑144 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCACACCCAAACCCGCACCCCCAAGGGGCGGGGGGGCCGGTGAGTACGGAATTTTGCTTGTCGGGGCGAACCCGCCTGAAATACgggg > 2:1723769/1‑147 (MQ=255) aTGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCa < 2:2363372/148‑1 (MQ=255) ccAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATAct < 1:2618148/148‑1 (MQ=255) ccAGCATCGCATCCGGCGATGCTGGCGCGATGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATAct < 1:1278199/148‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATActct < 1:2766480/148‑1 (MQ=255) gcatcgcctcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:2708107/148‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 1:2289833/148‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:2068614/148‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCGAACCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:2068654/148‑1 (MQ=255) catcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 1:3076956/148‑1 (MQ=255) tcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACg < 2:621083/148‑1 (MQ=255) catcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaa < 1:55068/148‑1 (MQ=255) tcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCCCACCCAAAACCACTCCCCCAAAGGGCGAGGGGGCCGGTCAGTACCGAATTTAGCTTGTCGGTGCGATACAGCATTAAATAAATGCAATAATATCACCCacaa > 2:1944463/1‑148 (MQ=255) cGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgc < 1:2189914/148‑1 (MQ=255) gATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgca < 2:1206102/148‑1 (MQ=255) gATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgca < 2:671418/148‑1 (MQ=255) aTGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcag < 1:1511083/148‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 2:2125469/148‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 1:1345125/148‑1 (MQ=255) cgTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtctc < 1:520687/148‑1 (MQ=255) tGAATTTTACATCCCGTAC‑GTTCCCCTCACCCAAAACCCCACCCCCAACGGGGGCGGGGGCCCGGCCGTAAGGTCTTTTTCGTGTAGGTGCTATACAGCAATAAAAAATGGGCATACACTCCAGCAAAAAAAGCAGCACCCGCTCtta > 2:71578/1‑147 (MQ=255) ttttACATCCCGTAC‑GTTCCCCTCACCCTACCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCg < 2:1894652/148‑1 (MQ=255) ttttACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAATGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCg < 1:2226555/148‑1 (MQ=255) tttACATCCCGTAC‑GTTCCCCTCACCCAAACCCAATCCCCAAATGGGCGAGGGGACCCTTAAGTACGGAATTTATAATGAAGGTGCTAAACACCAATAAATAAAGGCAATACACTCACGCAAAATACGCAGCAACCTCTATTAAACGc > 2:1836685/1‑148 (MQ=255) ttACATCCCGTAC‑GGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCt < 1:88020/148‑1 (MQ=255) cATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCg < 1:2874223/148‑1 (MQ=255) aTCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGa < 1:2908469/148‑1 (MQ=255) ttCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa > 2:683568/1‑148 (MQ=255) | AAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAA > CP009273/3498068‑3498361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |