Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,527,619 | G→T | 6.2% | A481A (GCG→GCT) | pck → | phosphoenolpyruvate carboxykinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,527,619 | 0 | G | T | 6.2% | 756.1 / 16.4 | 202 | A481A (GCG→GCT) | pck | phosphoenolpyruvate carboxykinase |
Reads supporting (aligned to +/- strand): ref base G (113/76); new base T (9/4); total (122/80) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.71e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 202 total aligned reads displayed.
GGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGG > CP009273/3527473‑3527764 | ggcgCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGa > 1:1018329/1‑148 (MQ=255) ggcgCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGa < 1:3219487/148‑1 (MQ=255) ggcgCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGa > 1:2941057/1‑148 (MQ=255) ggcgCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGa < 1:2760193/148‑1 (MQ=255) cgcgcAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATc < 1:1981403/148‑1 (MQ=255) cgcgcAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATc < 1:1981325/148‑1 (MQ=255) gcgcAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATcc < 1:2122736/148‑1 (MQ=255) cAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCTATCCCaa < 2:738718/148‑1 (MQ=255) gCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCg < 1:2885001/148‑1 (MQ=255) cTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGa > 1:1082105/1‑148 (MQ=255) ttATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGaa < 1:1191583/148‑1 (MQ=255) tCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTg < 1:880866/148‑1 (MQ=255) tCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTg > 2:3260304/1‑148 (MQ=255) cTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGc < 2:1735165/148‑1 (MQ=255) ggTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGACCTGCCg > 1:2245609/1‑148 (MQ=255) gTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCgg < 2:1325613/148‑1 (MQ=255) acacTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGt < 1:788009/148‑1 (MQ=255) acacTGGCTGGAACGGCACTGGAAAACTTATCTCTATTAAAGATACCCGCGACTTTATCGACGCCATCCTCAACGGTTCGCTGTATATTGCAGAAACCTTCACTCTGCCGATTTTTAACCTGGCGATCCCAACCGAACTGCCGGGctt < 2:3169672/148‑3 (MQ=255) tggctggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGac > 1:128693/1‑148 (MQ=255) ggctggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGaca < 2:2188564/148‑1 (MQ=255) ggctggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGaca < 2:2670041/148‑1 (MQ=255) tggAACGGCACTGGCAAACGTATCTCTATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGa < 1:2503470/148‑1 (MQ=255) gAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAg < 2:21053/148‑1 (MQ=255) gAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAg < 2:1303768/148‑1 (MQ=255) aaCGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGa > 1:1732335/1‑148 (MQ=255) cTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGa > 2:3152720/1‑148 (MQ=255) cTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGa < 1:2078865/148‑1 (MQ=255) cTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGa > 1:11450/1‑148 (MQ=255) cTGGCAAACGTATCTCGATGAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGa < 2:1879361/148‑1 (MQ=255) tGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGAt < 2:104799/148‑1 (MQ=255) cGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTa < 2:2768641/148‑1 (MQ=255) cGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTa > 2:3258709/1‑148 (MQ=255) cGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTa > 2:1619766/1‑148 (MQ=255) tATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAac < 1:760317/148‑1 (MQ=255) tATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAac > 1:578718/1‑148 (MQ=255) tctcGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAacac < 2:1407300/148‑1 (MQ=255) ctcGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACAcc > 2:3238814/1‑148 (MQ=255) tcGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCTATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCt < 2:892502/148‑1 (MQ=255) tAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCt < 2:138546/148‑1 (MQ=255) aaGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTtc > 2:209877/1‑148 (MQ=255) aaGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTtc > 2:3028142/1‑148 (MQ=255) gATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTtctc < 2:374985/148‑1 (MQ=255) aTACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTcc > 2:1177816/1‑148 (MQ=255) aTACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTcc > 2:265869/1‑148 (MQ=255) aTTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGc > 1:2550898/1‑148 (MQ=255) tCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGa > 1:380586/1‑148 (MQ=255) cGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACACTGCCGATGTAAAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaa > 1:3249882/1‑148 (MQ=255) aCGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaaaa < 2:2017132/148‑1 (MQ=255) aCGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaaaa < 2:1255683/148‑1 (MQ=255) aCGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaaaa < 2:1058984/148‑1 (MQ=255) cGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaaaaa > 1:242849/1‑148 (MQ=255) cGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGaaaaa < 1:2326415/148‑1 (MQ=255) ccATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGc < 2:575193/148‑1 (MQ=255) aTCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCg > 1:3057221/1‑148 (MQ=255) tCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGa > 1:1370553/1‑148 (MQ=255) tCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACAGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGa > 2:1882600/1‑148 (MQ=255) tCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAAc > 2:1272052/1‑148 (MQ=255) tCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAAc > 1:3100303/1‑148 (MQ=255) cAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAAcc < 1:2397968/148‑1 (MQ=255) cAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAAcc > 1:2706500/1‑148 (MQ=255) cAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAAcc < 1:2397718/148‑1 (MQ=255) cGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTg < 2:1018329/148‑1 (MQ=255) ttCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCTATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGCCg > 2:2137021/1‑148 (MQ=255) ttCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCg > 2:1912972/1‑148 (MQ=255) tCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGa > 1:607255/1‑148 (MQ=255) tCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGa > 1:607137/1‑148 (MQ=255) gCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCTATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGaaa < 2:296550/148‑1 (MQ=255) ggATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTg > 1:1496656/1‑148 (MQ=255) ggATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTg > 1:922465/1‑148 (MQ=255) gATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGt > 2:1431438/1‑148 (MQ=255) aTAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGtt > 2:888460/1‑148 (MQ=255) aTAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGtt > 1:1459118/1‑148 (MQ=255) tAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGttt < 2:462519/148‑1 (MQ=255) tGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATc > 1:386990/1‑148 (MQ=255) cAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGa > 2:2537190/1‑148 (MQ=255) gAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACa < 2:221016/148‑1 (MQ=255) aaaCCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACaa > 1:1832399/1‑148 (MQ=255) aaCCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAAc < 1:101507/148‑1 (MQ=255) ccTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACtt > 1:1337188/1‑148 (MQ=255) ccTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACtt > 1:2297385/1‑148 (MQ=255) tCACTCTGCCGATGTTTAACCTGGCTATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGa > 2:3086941/1‑148 (MQ=255) tCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGACACCCTGGCGAAACTGTTTATCGACAACTTCGa > 2:473337/1‑148 (MQ=255) tCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGa > 1:536343/1‑148 (MQ=255) ctGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAAt > 1:2814024/1‑148 (MQ=255) ctGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAAt < 1:1173644/148‑1 (MQ=255) tGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATa < 1:2789277/148‑1 (MQ=255) ccGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATaca < 1:2132767/148‑1 (MQ=255) aTGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCg > 2:1196203/1‑148 (MQ=255) aTGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCg > 2:1520448/1‑148 (MQ=255) gTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGac > 2:15088/1‑148 (MQ=255) tttAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGaca > 1:423853/1‑148 (MQ=255) ttAACCTGGCTATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGacac > 1:862374/1‑148 (MQ=255) ttAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGacac > 2:708428/1‑148 (MQ=255) aCCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACAcccc < 2:2202224/148‑1 (MQ=255) ccTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCt > 1:2604061/1‑148 (MQ=255) ccTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCt > 1:2601211/1‑148 (MQ=255) tGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGc > 2:209144/1‑148 (MQ=255) ggCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCg > 1:2732135/1‑148 (MQ=255) gCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCgg > 1:143686/1‑148 (MQ=255) gCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCgg > 2:2258866/1‑148 (MQ=255) | GGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGG > CP009273/3527473‑3527764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |