| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,563,702 | T→A | 10.1% | E326D (GAA→GAT) | glgX ← | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,563,702 | 0 | T | A | 10.1% | 578.0 / 47.3 | 197 | E326D (GAA→GAT) | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base T (73/104); new base A (7/13); total (80/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
Only 100 of 201 total aligned reads displayed.
ATATCCCACGGTTCAGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAG > CP009273/3563556‑3563849 | tCCCACGGTTCAGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTa > 1:123341/1‑148 (MQ=255) tCCCACGGTTCAGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTa < 1:1986807/148‑1 (MQ=255) tCCCACGGTTCAGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTa > 2:3222858/1‑148 (MQ=255) aGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgc < 2:3107357/148‑1 (MQ=255) aGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgc > 2:1250226/1‑148 (MQ=255) gCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgca < 2:1172847/148‑1 (MQ=255) ttAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgcaggca < 2:3279616/148‑1 (MQ=255) tAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgcaggcag < 1:1536756/148‑1 (MQ=255) tAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACgcaggcag < 1:3255867/148‑1 (MQ=255) aCTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCaggcaggc > 1:3302224/1‑148 (MQ=255) cTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGgcg < 2:1526495/148‑1 (MQ=255) aCCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTgg > 1:380280/1‑148 (MQ=255) cTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCa < 1:937165/148‑1 (MQ=255) gCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGAGGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATa < 2:153604/148‑1 (MQ=255) agagCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATc > 1:257210/1‑148 (MQ=255) agagCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATc > 1:57389/1‑148 (MQ=255) gagCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATcc < 1:2811137/148‑1 (MQ=255) gagCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATcc < 1:2426298/148‑1 (MQ=255) agCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATcca > 2:861265/1‑148 (MQ=255) gCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCAccgcc > 2:390165/1‑148 (MQ=255) tCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATg < 1:598033/148‑1 (MQ=255) tCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATg > 2:583581/1‑148 (MQ=255) ggATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACt > 2:3258348/1‑148 (MQ=255) ggATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACt < 2:1590688/148‑1 (MQ=255) gATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTc > 2:560822/1‑148 (MQ=255) aGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCaaa > 1:3102462/1‑148 (MQ=255) aGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCaaa > 2:1342427/1‑148 (MQ=255) gCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAAt > 1:3079158/1‑148 (MQ=255) gCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAAt < 1:3222858/148‑1 (MQ=255) gCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAAt > 2:3171385/1‑148 (MQ=255) aacaacGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCg > 2:1987644/1‑148 (MQ=255) acaacGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCgt > 2:10062/1‑148 (MQ=255) caacGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCCCCGCCGGATGACTCAAATTGAGCgtg < 2:60252/148‑1 (MQ=255) cGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTg > 2:2317591/1‑148 (MQ=255) gcgcATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGcc > 2:1787973/1‑148 (MQ=255) gcgcATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGcc > 2:2748840/1‑148 (MQ=255) ccTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGACATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAAcc > 2:182849/1‑148 (MQ=255) ccTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAAcc < 1:2183387/148‑1 (MQ=255) cTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCg < 1:808258/148‑1 (MQ=255) tGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCgg > 1:630930/1‑148 (MQ=255) aCGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTc < 1:1904249/148‑1 (MQ=255) gAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAg > 1:847005/1‑148 (MQ=255) aaCTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGt > 2:2860608/1‑148 (MQ=255) aaCTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGt < 2:1071003/148‑1 (MQ=255) tctGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTtgt < 2:3282192/148‑1 (MQ=255) ctGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTtgtg > 2:568203/1‑148 (MQ=255) ctGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTtgtg < 1:2487654/148‑1 (MQ=255) gCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATa < 2:3170465/148‑1 (MQ=255) gCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATa < 1:1726403/148‑1 (MQ=255) gCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATa < 2:3170258/148‑1 (MQ=255) cGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATaa < 2:667166/148‑1 (MQ=255) cGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATaa < 2:2672234/148‑1 (MQ=255) gTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAAt < 2:270285/148‑1 (MQ=255) cccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGt < 1:703124/148‑1 (MQ=255) ccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtc < 1:937081/148‑1 (MQ=255) ccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtc < 2:2884888/148‑1 (MQ=255) ccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtc < 2:1441686/148‑1 (MQ=255) ccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtc < 1:565703/148‑1 (MQ=255) ccATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtc < 1:927689/148‑1 (MQ=255) cATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtct < 2:3146908/148‑1 (MQ=255) aTGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtctt < 2:1036384/148‑1 (MQ=255) aTGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtctt > 1:493420/1‑148 (MQ=255) tGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGtcttc < 2:239028/148‑1 (MQ=255) aCTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTtctc < 2:1144086/148‑1 (MQ=255) cTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTctct < 1:10062/148‑1 (MQ=255) tGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCtt > 1:1668668/1‑148 (MQ=255) tGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCtt < 2:1344751/148‑1 (MQ=255) gccgccAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTa < 1:1365527/148‑1 (MQ=255) cAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaa < 2:2483780/148‑1 (MQ=255) aGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaat < 1:3260903/148‑1 (MQ=255) gATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaata < 1:2330390/148‑1 (MQ=255) aTCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaataa < 2:2036998/148‑1 (MQ=255) aTCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaataa < 1:2597145/148‑1 (MQ=255) aTCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaataa > 2:1399633/1‑148 (MQ=255) tCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaataat > 2:1628991/1‑148 (MQ=255) tCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCaataat > 2:2980689/1‑148 (MQ=255) cAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAataata < 1:2461204/148‑1 (MQ=255) cAAAGCGGAAACCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAataata < 2:1914840/148‑1 (MQ=255) aaaGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAg < 2:1952594/148‑1 (MQ=255) aaaGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAg < 1:2987403/148‑1 (MQ=255) aaGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTtctc < 2:187270/133‑1 (MQ=255) aaGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTtctc > 1:1858012/1‑133 (MQ=255) aaGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGc < 1:2014881/148‑1 (MQ=255) gCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTa < 2:3140331/148‑1 (MQ=255) gAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACgg > 2:283216/1‑148 (MQ=255) gAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACgg < 1:1790858/148‑1 (MQ=255) gAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGACATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACgg < 1:1250578/148‑1 (MQ=255) aaaCCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGt < 1:486246/148‑1 (MQ=255) aaaCCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGt < 1:2238122/148‑1 (MQ=255) aCCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTa > 1:1488889/1‑148 (MQ=255) aCCATCGACGTGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTa > 1:2163487/1‑148 (MQ=255) tCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGa > 2:2103800/1‑148 (MQ=255) aCGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATcc < 1:2081395/148‑1 (MQ=255) tGGCAGGTATCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCAc > 1:3132408/1‑148 (MQ=255) cAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCa > 1:2535490/1‑148 (MQ=255) ggTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGc > 2:2380781/1‑148 (MQ=255) gattCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTAAGGTTATCGATCCCACGCAGCg > 1:520165/3‑148 (MQ=255) gTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCg > 2:3043751/1‑148 (MQ=255) gTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCg > 1:2185971/1‑148 (MQ=255) ttCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCgag > 1:2647402/1‑148 (MQ=255) | ATATCCCACGGTTCAGCAATTAACTTCACCTGCGAGAGCACCGGGCAGTTCTGGATAGCGGTAAACAACGGCGCATCCTGACGGAACTCTGGCGTACGGCCCATGACTGCCGCCAGATCAAAGCGGAAACCATCGACGTGGCAGGTTTCTACCCAATAACGCAGGCAGGCGCTGGCATAATCCACCACCGCCGGATGACTCAAATTGAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAG > CP009273/3563556‑3563849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |