| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,692,994 | T→A | 91.1% | F474Y (TTC→TAC) | bcsG → | DUF3260 family inner membrane protein associated with cellulose production |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,692,994 | 0 | T | A | 91.1% | 479.0 / 31.3 | 158 | F474Y (TTC→TAC) | bcsG | DUF3260 family inner membrane protein associated with cellulose production |
| Reads supporting (aligned to +/- strand): ref base T (9/5); new base A (62/82); total (71/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
TGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCA > CP009273/3692851‑3693137 | ttaaCTTGAGAAATCGGGTCGTATAGTTATGGTGGTCGTGGTGCCGGAACACGGCGGCGCTCTGAAGGGCGACAGAATGCATGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCAGTTGGGGTGAAAtacttc < 1:2151297/146‑1 (MQ=255)tGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtacttc > 1:2172359/1‑148 (MQ=255)tGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtacttc < 1:211098/148‑1 (MQ=255)tGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtacttc > 1:2089433/1‑148 (MQ=255)tGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtacttc > 1:2172664/1‑148 (MQ=255) atattGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTTTCACCGACGTCCCCGTTGGGGTGAAATACTTCgg < 2:1533971/145‑1 (MQ=255) aCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGc < 1:395559/148‑1 (MQ=255) aCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGc < 1:380674/148‑1 (MQ=255) ttGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCAt > 1:2455103/1‑148 (MQ=255) agaAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGaa < 1:2417572/148‑1 (MQ=255) aaaTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAgg > 1:115189/1‑148 (MQ=255) aaaTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAgg > 1:2002323/1‑148 (MQ=255) aaTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGc < 2:2063926/148‑1 (MQ=255) aTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCa < 1:1078715/148‑1 (MQ=255) tCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCAc > 2:2636578/1‑148 (MQ=255) ggTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGc < 1:78898/148‑1 (MQ=255) tAAAGTGATGGTGGTCGTGGTGACGGAACACGGCGGCGCGCTGAAGTGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGAACCGCATCAg > 2:2284717/1‑148 (MQ=255) aaGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGGTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAggg > 2:2129899/1‑148 (MQ=255) tGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGc > 1:1970871/1‑148 (MQ=255) tggtggTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCAcc > 1:2157778/1‑148 (MQ=255) tggtCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGAt < 2:2826797/148‑1 (MQ=255) ggtCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGAtt > 2:551016/1‑148 (MQ=255) ggtCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGAtt > 2:57947/1‑148 (MQ=255) gtCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTg < 1:944265/148‑1 (MQ=255) gtCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTg > 1:1543162/1‑148 (MQ=255) tCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGt > 1:713499/1‑148 (MQ=255) cGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaaca < 2:1798103/148‑1 (MQ=255) gAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaacaac > 1:3305536/1‑148 (MQ=255) cacGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGa > 2:2778420/1‑148 (MQ=255) acGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGag < 1:870585/148‑1 (MQ=255) acGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGag < 1:3045048/148‑1 (MQ=255) gcggcgCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGagcag < 2:2809494/148‑1 (MQ=255) cggcgCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGagcagc < 1:3248591/148‑1 (MQ=255) cgcTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCt < 2:649015/148‑1 (MQ=255) cTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTgg < 1:600387/148‑1 (MQ=255) cTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTgg < 2:797060/148‑1 (MQ=255) tGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGc < 1:329870/148‑1 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 2:2780971/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc < 1:49767/148‑1 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 2:1265169/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 1:1903786/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 1:1631642/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 1:1408302/1‑148 (MQ=255) ggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtct > 1:1443868/1‑148 (MQ=255) gCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtctc < 1:797205/148‑1 (MQ=255) gCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtctc < 2:377961/148‑1 (MQ=255) cAGAATGCAGGTATCTGGCCTACGTGATATCACTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGAt < 1:2390038/148‑1 (MQ=255) aGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATc < 1:2616953/148‑1 (MQ=255) aGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATc < 1:2616962/148‑1 (MQ=255) cAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCtggtgg < 1:1725810/148‑1 (MQ=255) cAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACAGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCtggtgg < 1:1095815/148‑1 (MQ=255) cAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCtggtgg < 2:1146599/148‑1 (MQ=255) aGGTATCTGGCCTACGTGATATCCCTAGCCCCTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTggtggt < 2:1205692/148‑1 (MQ=255) gTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTCTCTCCGATCTGGTGGTTc > 2:1717794/1‑148 (MQ=255) cTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGt > 1:441637/1‑148 (MQ=255) ccTACGTGATATCCCTAGCCCGTCTATCACTGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTtctc < 2:1021134/148‑1 (MQ=255) ccTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTtctc > 1:2793276/1‑148 (MQ=255) cTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCg > 1:1636429/1‑148 (MQ=255) cTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCg < 2:577620/148‑1 (MQ=255) tACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGa < 1:804165/148‑1 (MQ=255) aCGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGAt > 1:3083349/1‑148 (MQ=255) aCGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGAt > 1:3085947/1‑148 (MQ=255) tGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGc > 1:404855/1‑148 (MQ=255) gATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCa > 1:673311/1‑148 (MQ=255) tatCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAg > 2:337162/1‑148 (MQ=255) tatCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAg < 1:1114822/148‑1 (MQ=255) tatCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAg < 1:3139091/148‑1 (MQ=255) atCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGa > 1:1765570/1‑148 (MQ=255) atCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGa > 1:2892882/1‑148 (MQ=255) tCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAt < 1:176687/148‑1 (MQ=255) tCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAt < 2:225294/148‑1 (MQ=255) cccTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtt > 2:170747/1‑148 (MQ=255) cccTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtt < 1:2373044/148‑1 (MQ=255) cccTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtt < 1:20292/148‑1 (MQ=255) cccTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtt < 2:2609261/148‑1 (MQ=255) cTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtttt > 1:482354/1‑148 (MQ=255) cTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAtttt < 1:1123378/148‑1 (MQ=255) tAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTc > 2:406316/1‑148 (MQ=255) aGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCa < 1:1265169/148‑1 (MQ=255) cGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGa < 1:3074536/148‑1 (MQ=255) tCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAg > 2:2140436/1‑148 (MQ=255) tCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAg > 1:215005/1‑148 (MQ=255) cTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGa < 2:2576214/148‑1 (MQ=255) aTCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACa < 2:2424015/148‑1 (MQ=255) tCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACaa < 2:1970871/148‑1 (MQ=255) aCCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATg < 2:2951869/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 2:2455103/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 1:3103110/148‑1 (MQ=255) aCGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGa < 2:838297/148‑1 (MQ=255) gTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACt < 2:2302874/148‑1 (MQ=255) ccccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTgg > 2:3075522/1‑148 (MQ=255) ccccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTgg > 1:133218/1‑148 (MQ=255) gggTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACt < 1:551016/148‑1 (MQ=255) ggTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTc < 2:3085947/148‑1 (MQ=255) ggTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTc < 2:2002323/148‑1 (MQ=255) ggTCAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGACAACGAAAAACCTATCAGCTACCTGGCTATCTCCGATCTGGTGGTTCTCTTTCTCGATTGCAAGATTTTCACCGAAGACAAAGTTGACTGGAAAAAACTc > 2:697688/1‑148 (MQ=255) gTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCa < 2:3057905/148‑1 (MQ=255) tGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCAc < 1:1557354/148‑1 (MQ=255) gAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCAcc > 2:2324591/1‑148 (MQ=255) aaaTACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCa < 1:851323/148‑1 (MQ=255) | TGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCA > CP009273/3692851‑3693137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |