| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,705,228 | T→A | 7.8% | Q47L (CAG→CTG) | yhjX ← | pyruvate‑inducible inner membrane protein, putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,705,228 | 0 | T | A | 7.8% | 537.5 / 30.4 | 179 | Q47L (CAG→CTG) | yhjX | pyruvate‑inducible inner membrane protein, putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (101/63); new base A (7/7); total (108/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
AATGCGCTGTCAGGAAGAAGCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATGGCAGTAT > CP009273/3705082‑3705375 | aaTGCGCTGTCAGGAAGAAGCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTg > 1:2246547/1‑148 (MQ=255) tCAGGACGACGCCTAAGCCCACCAAAAGGCCGCACGCCTTGGTGACGCGTTTAACGCAAAAACGTTCCTTTAATGGGCCCCCACCAGAAGACGAAATGGCCACCCCCAGAATTAACACGCCCAAACAGAAAGCGACCTGGCTTACCgg < 2:3063698/148‑1 (MQ=255) ggAAGAAGCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGgcgc > 1:688614/1‑148 (MQ=255) gaagCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATcc > 2:3246404/1‑148 (MQ=255) gaagCCTAATCCCAGCAAAAGGCCGGAAGCCTTGGTGACGCTTTAAACGCCAAAACGTTCCTGTAATTTGCCCGCAACCGAAGACGAATTTGCCAGCCCCAGACTTAACACGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATcc < 2:328082/148‑1 (MQ=255) gCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGc > 1:2807408/1‑148 (MQ=255) ccTAATCCCAGCAAAATGCGGGACGCCTTGGTGACGCGTTTAACGCCAAAAGGTTCCTGTAATTTGCCCGCACCATAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGACAACGCGACCTGGCTTACCGGCGCATCCAGCt < 1:1106337/148‑1 (MQ=255) ccTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGAAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGATAAAGCGACCTGGCTTACCGGCGCATCCAGCt < 2:2981977/148‑1 (MQ=255) aaTCCCAGCAAACTGCCGGAAGCCATGGTGACGCGTTTAACGCCAAACCGTTCCTGTAATTTGCCCGCACCAGAAGACGAAATTGCCAGCCCCAGACTTAACACGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTgg < 2:1053639/148‑1 (MQ=255) aaTCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTgg > 2:876279/1‑148 (MQ=255) aaTCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTgg > 2:2541960/1‑148 (MQ=255) tCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCg > 2:801562/1‑148 (MQ=255) tCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCg > 2:1999791/1‑148 (MQ=255) tCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCg > 1:1500750/1‑148 (MQ=255) tCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCg > 1:2710473/1‑148 (MQ=255) cAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAgc > 1:1230367/1‑148 (MQ=255) aTGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGACAgcgcgc > 2:1186938/1‑148 (MQ=255) aTGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAgcgcgc > 2:2197366/1‑148 (MQ=255) tGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGcc > 2:2541632/1‑148 (MQ=255) tGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGcc > 1:225449/1‑148 (MQ=255) gCCGGAACCCTTGGTGACGCTTTTAACGCCAAAACGTTCCTGTAATTGGCCCGCAACCGAACACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAACGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCa < 1:2437983/148‑1 (MQ=255) aaGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGATAGCGCGCCATTaaa > 1:1814339/1‑148 (MQ=255) gCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACa > 1:3018622/1‑148 (MQ=255) gCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACa > 1:3018453/1‑148 (MQ=255) aaTGGTGCCGCTTTAAACGAAAAATCGTTCCTTTAATTGGCCCCCAACCCAAGCCCAATTTGCCCGCCCCATAATAACCCCGCCTAAATACAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAgg < 1:49306/147‑1 (MQ=255) aTGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGc > 2:194880/1‑148 (MQ=255) ggTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTc < 2:130556/148‑1 (MQ=255) ggTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTc > 2:2892030/1‑148 (MQ=255) cgcgTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGt > 2:2662666/1‑148 (MQ=255) cttttAACGCAAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCTAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGtat < 2:1601342/146‑1 (MQ=255) cgTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGtat > 2:213956/1‑148 (MQ=255) ttAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATaaa > 1:566277/1‑148 (MQ=255) ttAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATaaa > 1:2862922/1‑148 (MQ=255) ttAACGCAAAAAGGTTCCTTTATTTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACACGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATaaa < 1:134866/148‑1 (MQ=255) ttAACGCAAAAACTTTCCTGTATTTTGCCCGAAACAGAAGACTAATTGGCCAGCCCCAGATTTAAAACGCCTAAAGAGAACGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATaaa < 1:1562671/148‑1 (MQ=255) ttAACCACAAAAGGTTCCTTTAATTGGCCCGCAACAGAAGACTAAATTGCCAGCCCCAGACTTAACAAGCCCAAAGACAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATaaa < 1:3202642/148‑1 (MQ=255) aCGCCAAACCGTTCCTTTAATTTCCCCCCAACACCACACGAAATTGCCAGCCCCACACTTAACCCCCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCg < 2:2132733/148‑1 (MQ=255) aCGCCAAAACGTTCCTTTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGAATTAACAAGCCTAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCg < 2:774779/148‑1 (MQ=255) aCGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCg > 1:1583281/1‑148 (MQ=255) aCGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCg > 1:1926734/1‑148 (MQ=255) aaCGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAg > 2:240550/1‑148 (MQ=255) gtttCCTTTATTTTGCCCCAAACATAAAACGAAATGGCCACCCCCAGAATAAAAACGCCGAAAGACAACGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAgcg < 1:2630394/146‑1 (MQ=255) cGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAgcg > 1:3230367/1‑148 (MQ=255) ttCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCa > 1:2937754/1‑148 (MQ=255) ttCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCa > 1:1417586/1‑148 (MQ=255) tCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAACGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCaa > 2:1717555/1‑148 (MQ=255) tCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCaa > 2:1715877/1‑148 (MQ=255) ccTGTAATTGGCCCGCAACAGAAGACTAATTTGCCACCCCCAGACTTAACAACCCTAAAGACAACGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCaaa < 1:1027533/148‑1 (MQ=255) tGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACt > 2:3109023/1‑148 (MQ=255) gTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTg > 1:1499849/1‑148 (MQ=255) gTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTg > 1:3130828/1‑148 (MQ=255) gTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTg > 1:859433/1‑148 (MQ=255) aaTTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTggg > 2:1499480/1‑148 (MQ=255) aaTTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTggg > 1:886812/1‑148 (MQ=255) aaTTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTggg > 2:579738/1‑148 (MQ=255) aTTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGt > 2:3047675/1‑148 (MQ=255) tttGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTa > 1:965880/1‑148 (MQ=255) ttgcccccCACCATAACACCAAATTCCCCCCCCCACACTAAACACCCCTAACGACAACGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTa < 1:1720826/144‑1 (MQ=255) tgggCCCGAAACACAACACGAAATGGCCAGCCCCATCATAACCAACCCCAAAGACAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTa < 1:2600930/145‑1 (MQ=255) ccccAACAGACGACGATATTGCCCGCCCCAGACTTAACACGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGAt < 2:1992248/145‑1 (MQ=255) ccGCACCAGAAGACGAAATGCCCAGCCCCACAATAAACACGCCCAAAGACAACGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGAt < 2:1992123/148‑1 (MQ=255) aaCAGAAGACGAAATTGCCACCCCCACACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTa < 2:201031/148‑1 (MQ=255) aCAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTAc > 1:2116367/1‑148 (MQ=255) aagaCGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGAt > 2:1259533/1‑148 (MQ=255) aagaCGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGAt > 2:1739523/1‑148 (MQ=255) aagaCGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGAt > 2:1967019/1‑148 (MQ=255) aacactaaaTTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCAGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGAt < 2:2865315/142‑1 (MQ=255) aaTTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTc > 2:55404/1‑148 (MQ=255) ttGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTcag > 2:213334/1‑148 (MQ=255) ttGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTcag > 1:359587/1‑148 (MQ=255) ttGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTcag > 2:1886916/1‑148 (MQ=255) gCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCg > 2:25071/1‑148 (MQ=255) ccAGACTTAACACGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGt < 2:1007168/148‑1 (MQ=255) ccAGAATTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGt < 2:1995132/148‑1 (MQ=255) cAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTa > 1:3178651/1‑148 (MQ=255) cAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTa > 2:1177859/1‑148 (MQ=255) aCTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGc > 1:287399/1‑148 (MQ=255) aCTTAACAACCCGAAAGACAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGc < 2:731508/148‑1 (MQ=255) ttAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTg < 2:2989744/148‑1 (MQ=255) aCAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATa > 2:482166/1‑148 (MQ=255) aCAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATa > 1:395240/1‑148 (MQ=255) aCAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATa > 2:1364170/1‑148 (MQ=255) gCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAAttt > 2:3287756/1‑148 (MQ=255) gCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAAttt > 1:2648174/1‑148 (MQ=255) cctaaaGATAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGATAGCGCGCCATTAAACAGGCTCCAGTTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACTCTGATAATTTg < 2:2472019/145‑1 (MQ=255) gAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGaa < 2:2111216/148‑1 (MQ=255) gAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGaa < 2:2111592/148‑1 (MQ=255) agagAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGgt > 2:1351473/1‑148 (MQ=255) acagaAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGgt < 2:688614/146‑1 (MQ=255) gagaAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGgtg > 2:2871859/1‑148 (MQ=255) gagaAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGgtg > 1:337106/1‑148 (MQ=255) agaAAGCGGCCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGgtgt < 2:2814613/148‑1 (MQ=255) ccacgCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTc < 1:571737/144‑1 (MQ=255) aGCGACCTGGCTTACCGGCGCATCCCGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATg < 2:2292373/148‑1 (MQ=255) aGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATg > 2:3166845/1‑148 (MQ=255) gCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATgg > 2:1366576/1‑148 (MQ=255) gCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATgg > 1:1827173/1‑148 (MQ=255) cGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATGGc > 2:2887571/1‑148 (MQ=255) ccTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATGGCAGt < 1:213349/148‑1 (MQ=255) ccTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATGGCAGt < 1:1886916/148‑1 (MQ=255) | AATGCGCTGTCAGGAAGAAGCCTAATCCCAGCAAAATGCCGGAAGCCATGGTGACGCGTTTAACGCCAAAACGTTCCTGTAATTTGCCCGCAACAGAAGACGAAATTGCCAGCCCCAGACTTAACAAGCCGAAAGAGAAAGCGACCTGGCTTACCGGCGCATCCAGCTTGGCGGAAAGCGCGCCATTAAACAGGCTCCAGGTATAAACCGACCCCAGCGCAAACTGGGTAATGATAGTACCGATGAGTGTCAGCCAGCGGGTACGCTGATAATTTGAAGGTGTCATGGCAGTAT > CP009273/3705082‑3705375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |