Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,822,340 A→C 20.1% Q12H (CAA→CAC) ‡ xanP → xanthine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,822,3400AC20.1% 265.4 / 21.7 178Q12H (CAA→CAC) ‡xanPxanthine permease
Reads supporting (aligned to +/- strand):  ref base A (93/45);  new base C (5/35);  total (98/80)
Fisher's exact test for biased strand distribution p-value = 4.05e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 180 total aligned reads displayed.

ATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCA  >  CP009273/3822193‑3822480
                                                                                                                                                    |                                                                                                                                            
ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCa‑a                                                                                                                                              >  1:2400156/1‑148 (MQ=255)
  aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCa‑aac                                                                                                                                            >  1:2334966/1‑146 (MQ=255)
    aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑Acccc                                                                                                                                          >  1:747606/1‑146 (MQ=255)
    aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCgg                                                                                                                                          >  2:514572/1‑148 (MQ=255)
    aaaaGTGCATATATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCAACGCTCGAGGCAGAAAATGCGCA‑ACCgg                                                                                                                                          >  2:3283357/1‑148 (MQ=255)
      aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGtt                                                                                                                                        >  2:2802535/1‑148 (MQ=255)
      aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCgggt                                                                                                                                        >  1:2603894/1‑146 (MQ=255)
       aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTg                                                                                                                                       >  2:1814102/1‑148 (MQ=255)
       aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGGTg                                                                                                                                       >  1:3118251/1‑148 (MQ=255)
         tGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCA‑ACCGGTTgcg                                                                                                                                     >  1:2207820/1‑148 (MQ=255)
         tGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACACCGGtgcg                                                                                                                                      >  1:2100669/1‑145 (MQ=255)
         tGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTgcg                                                                                                                                     >  2:1807901/1‑148 (MQ=255)
              ttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGAc                                                                                                                                >  2:185265/1‑148 (MQ=255)
                aTCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTGCGCAGACTc                                                                                                                              >  2:2537603/1‑148 (MQ=255)
                   tcATTTAAATATTTTGATGTGGTTGTGGCAAACGTTTGCTTTTCTGTTTCGGTCAGCTTAAATGCCCGCTTTGCTACCACGTGTTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCA‑ACCGGTTGCGCAGACTCaaa                                                                                                                           <  2:2850344/148‑1 (MQ=255)
                   tcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCaaa                                                                                                                           <  2:2849830/148‑1 (MQ=255)
                   taaTTTAAATATTTAGATGAGGATGTGGAAAACTTTTGCTTTTCTCTTTCGGTCAGTTAAAATGCCGGCTTTGCTACCACGGTATTGTTTTCGATTTCTGTTTCCACCCTCGAGTCATAAAATGCGCA‑ACCGGTTGCGCAGACTCaaa                                                                                                                           <  2:3057568/146‑1 (MQ=255)
                    aaTTTAAATTTTTAGATGAGGATGTGGAAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCaaaa                                                                                                                          <  2:3055050/147‑1 (MQ=255)
                     aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAAc                                                                                                                         >  2:3112417/1‑148 (MQ=255)
                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTGCGCCGACTCAAAACa                                                                                                                        >  1:185070/1‑148 (MQ=255)
                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTGCGCAGACTCAAAACa                                                                                                                        >  2:3097000/1‑148 (MQ=255)
                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCaaaaaa                                                                                                                        >  1:1640492/1‑146 (MQ=255)
                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCCGGTGCGCAGACTCAAAACa                                                                                                                        >  1:186070/1‑148 (MQ=255)
                       ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACac                                                                                                                       >  1:2922281/1‑147 (MQ=255)
                         aaaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCg                                                                                                                     >  2:1281546/1‑148 (MQ=255)
                          aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAAAAGCGa                                                                                                                    >  2:861032/1‑148 (MQ=255)
                             atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACt                                                                                                                 >  2:3120840/1‑148 (MQ=255)
                             atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACt                                                                                                                 >  2:2191560/1‑148 (MQ=255)
                             atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGGTGCGCAGACTCAAAACAGCGAACt                                                                                                                 >  2:3046859/1‑148 (MQ=255)
                             atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGCTTGCGCAGACTCAAAACACCGAACt                                                                                                                 >  2:1161444/1‑148 (MQ=255)
                              tttAGATGTGGATGTGGCAAACGTTTTCTTTTCTATTTCGGTCAGCTAAAATGCCCGCTTTGCTACCAGGGGTTTTTTTTCTTTGTCTGTTTCCACCCTCGAGTCAGAAAAGGCGCA‑ACCGTTTGCGCAGACTCAAAACAGCGAACTg                                                                                                                <  2:1437263/148‑1 (MQ=255)
                              tttAGATGATGATGTGGCAAACGTTTGATTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTGTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTg                                                                                                                <  2:2239961/148‑1 (MQ=255)
                               ttAGTTGAGGTTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCAGGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                               <  2:615692/148‑1 (MQ=255)
                                tAGTTGAGGATGTGGCAAACGTTTGGTTTTCTGTTTCGGTCAGCTAAAATGCCCGGTTTGCTACCACGGGTTTGTTTTCTATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGAt                                                                                                              <  2:3099780/148‑1 (MQ=255)
                                tAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGAt                                                                                                              <  2:3071874/148‑1 (MQ=255)
                                   aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCCGTTGCGCAGACTCAAAAAACCCAACAGATTTa                                                                                                           >  1:1218544/1‑148 (MQ=255)
                                   aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCCAACTGAtata                                                                                                           >  2:854073/1‑148 (MQ=255)
                                        gATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGGTGCGCAGACTCAAAAAACCGCACTGAttttaagtc                                                                                                      >  1:1432548/1‑142 (MQ=255)
                                        gATGTGGCAAACGTTTGCTTTTCTCGTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTTTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTc                                                                                                      <  2:2451702/148‑1 (MQ=255)
                                         aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCA‑AACGGGTGCGCAGACTCAAAAAATCGAACTGtttttaaggct                                                                                                     >  1:645297/1‑141 (MQ=255)
                                            tgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTTCGCAGACACAAAACACCGAACAGATTTACCGTCTTGa                                                                                                  >  1:517551/1‑148 (MQ=255)
                                              gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCCGTTGCGCAGAAACAAAAAACCCAACAGATTTAACGTCtttatt                                                                                                >  1:2593436/1‑144 (MQ=255)
                                              gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAg                                                                                                <  2:217341/148‑1 (MQ=255)
                                                  aCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTGCGCAGACTCAAAAAAGCGCACAGATTTAACGTCTTTAAGATCg                                                                                            >  1:2302584/1‑148 (MQ=255)
                                                   cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCCGACTCAAAACAGCGAACGGATTTACCGGCTTGAAGATCGt                                                                                           >  1:3227754/1‑148 (MQ=255)
                                                   cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                           >  1:2964493/1‑148 (MQ=255)
                                                      ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAATATGGGCA‑CCCGGTTGCGCAGACTCAAAACAGCGCACAGATTTACCGTCTTGAATATAGTccg                                                                                        >  1:594534/1‑148 (MQ=255)
                                                      ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATGGTTTTCGATGTCTGGTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACCGCGCCCTGATTTACCGGCTTGATGAGCGGccg                                                                                        >  2:2027745/1‑148 (MQ=255)
                                                         cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGGCTTGAAGATCGTccgccg                                                                                     >  1:134936/1‑148 (MQ=255)
                                                           tttCTCTTGCGGTCAGAAAACAGGCCCGGTTTGCTACCACGGTTTTGTTTTCGTTGTGTGTTTCCACCCTCGTGTCAGAAATTGCGCA‑CCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCt                                                                                   <  1:2701423/148‑1 (MQ=255)
                                                             tctcTTTCGGTAAGCTAAAATGCCCGCTTTGCTACCTCGGGTTTTTTTTCGTTGTCTTTTTCCACCGTCGTGTCAGAAAATGCTCA‑AGGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                 <  2:1949747/148‑1 (MQ=255)
                                                               tctTGCGGTCAGCTAAAATGCCCGCTGTGCTCCCACGGGTTTGTTTTCGTTGTCGGTTCCCCCCCTCGAGGCACAAAAGGCGCA‑ACGGGTGGCGCAGACTCAAAATAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                               <  1:1974644/148‑1 (MQ=255)
                                                                   tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCaaa                                                                           <  2:1286934/148‑1 (MQ=255)
                                                                   tCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCaaa                                                                           <  2:1288808/148‑1 (MQ=255)
                                                                    cGGTCCGCTAAAAGGCCCGCTTTGCTACCCCGGTTTTGTTTTCGATGTTTGTTTCCACCCTCGAGTAACAAAATGCGCA‑CCCGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAc                                                                          <  1:3018504/148‑1 (MQ=255)
                                                                     ggTCAGCTAAACTGCCCGATTTGCTACCTCGGGATTGTTTTCGTTGTCTGTTACCACCCTCGAGACAGAAAATGCGCA‑CCCGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcc                                                                         <  1:1917715/148‑1 (MQ=255)
                                                                       tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑AACGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAACCt                                                                       >  2:30328/1‑148 (MQ=255)
                                                                        cAGCTAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                      <  2:2984113/148‑1 (MQ=255)
                                                                        cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGACAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcccgg                                                                      >  2:2901777/1‑146 (MQ=255)
                                                                         agatAAAATGCCCGATTTGCTACCACGGTTTTTTTTTCGATGTCTTTTTCCACCCTCGAGTCAGAAATTGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGt                                                                     <  1:2759497/145‑1 (MQ=255)
                                                                                aTGCCCGGTTTCCTACCCGGGTTTTGTTTTCGTTGTCTGTTACCACCCTCGAGTCATAAAAGGCCCA‑CCCGGGGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgc                                                              <  1:1226587/148‑1 (MQ=255)
                                                                                aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑CCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTgccgc                                                              >  2:985597/1‑148 (MQ=255)
                                                                                 tGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                             <  2:2781455/148‑1 (MQ=255)
                                                                                    cggttttGCTACCTGGGGTTTTTTTTCTTTGTCTGTTCCCACCCTCGAGACATAAAATGCGCA‑CCCGGGGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGt                                                          <  1:975669/144‑1 (MQ=255)
                                                                                    ccGCTTTGCTACCAGGGTATTGTTTTCTATGTCTGTTTCCCCCCTCGAGTCATAAAATGCGCC‑ACCGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGt                                                          <  1:975667/148‑1 (MQ=255)
                                                                                         ttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGGTTGCGCCGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                     >  2:1421729/1‑148 (MQ=255)
                                                                                            cTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCCGTTGCGCCGACACAAAAAACCGAACTGATTTACACTCTTTAAGATAGTCCGCCGCGTCCTCAAACCCAGTTTGCCGCCGGTCCGCATct                                                  >  1:409523/1‑148 (MQ=255)
                                                                                               ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTCTTTGCCGCCTGTCAGCATctgct                                               >  2:457100/1‑148 (MQ=255)
                                                                                               ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCAGTTTGCCGCCTGTCAGCATctgct                                               >  2:388430/1‑148 (MQ=255)
                                                                                                    ttttttttttGGATGTCTGTTACCACCCACGAGTCACAAAATGCGCA‑CCGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                          <  1:703610/142‑1 (MQ=255)
                                                                                                    ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                          >  2:1631259/1‑148 (MQ=255)
                                                                                                     gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCC‑ACCGCTTGCGCAGACTCAAAAAACCGAACAGATTTAACCGCTTGAAGATCGTCCCCCGCGTCCTCAAACCCGGTTTGGCGCCGGGCAGCCTCTGCTGGCGag                                         >  1:950532/1‑147 (MQ=255)
                                                                                                       ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                       <  2:873427/148‑1 (MQ=255)
                                                                                                       tcggtttCGAGGTCTGTTTCCCCCCTCGCGTCAGAAAATGCGCA‑CCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                       <  2:2525574/144‑1 (MQ=255)
                                                                                                          ttttCGATGTGTGTCTCCACCCTCGAGTCACAAACGGCGCC‑CCGGGGCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCg                                    <  1:1143399/148‑1 (MQ=255)
                                                                                                             tCGATGTCTGTTTCCACCCTCGAGTCACAACCTGCGCC‑CCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTg                                 <  1:824721/148‑1 (MQ=255)
                                                                                                             tCGATGTCTGTTACCACCCCCGAGACACAAAATGCGCA‑CGGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTg                                 <  1:1028230/148‑1 (MQ=255)
                                                                                                                aTGTCTTTTACCACCCTCGAGTCAGAAACTGCGCA‑CCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                              <  2:1045283/148‑1 (MQ=255)
                                                                                                                aTGTCTGGTACCACCCTCGAGACAGAAATGGCGCA‑CCGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                              <  1:2191560/148‑1 (MQ=255)
                                                                                                                   tCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAAAAGCGAACAGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCAAAAACCCTGTTTGGCGCCTGTCACCCTCAGCTGGCGATGTTAGTTGCGGTGa                           >  2:85740/1‑148 (MQ=255)
                                                                                                                   tCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCCGTTGCGCAGACTCAAAACAGCGAACAGATTTACAGTCTTTAAGATCGTCCGCCGCTTCCTCAAAAACTGTTTTCCGCCAGTAAGCATCTGCTGGCGATGTTAGTTGCGGTGa                           >  2:1310327/1‑148 (MQ=255)
                                                                                                                    cTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACACAAAACATCGAAATGATTTAACGTGTTGTATATAGTCCGCCGCGTCCTCAAACCCTGTTTGGCGCCTGTCAGCATCTGCTGGGGATGTTCGTTGGGGTGAt                          >  1:500523/1‑148 (MQ=255)
                                                                                                                         tCCACCCTCGAGTCAGAAAATGCGCA‑CCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                     <  2:157596/148‑1 (MQ=255)
                                                                                                                             cccTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgc                 >  2:2727769/1‑148 (MQ=255)
                                                                                                                              ccTCGAGTCAGAAAATGCGCA‑CCCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcg                <  2:1417875/148‑1 (MQ=255)
                                                                                                                               cTCGCGTCAGAAAAGGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgc               <  2:2400447/148‑1 (MQ=255)
                                                                                                                               cTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgc               <  2:2593436/148‑1 (MQ=255)
                                                                                                                               cTCGAGTCAGAAAATGCGCA‑ACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgc               <  2:2400156/148‑1 (MQ=255)
                                                                                                                                tCGAGTCAGAAAATGCGCA‑AACGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCTCAAAACCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGAACACGCCAGCGCt              >  2:1417123/1‑148 (MQ=255)
                                                                                                                                     tCAGACAAGGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTGACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCGGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTaa         <  2:2603903/148‑1 (MQ=255)
                                                                                                                                     tCACAAAATGCGCC‑CCGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTaa         <  1:1052344/148‑1 (MQ=255)
                                                                                                                                      cAGAATAGGCGCA‑CCGGTTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt        <  1:3283357/148‑1 (MQ=255)
                                                                                                                                      cAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt        <  2:2100669/148‑1 (MQ=255)
                                                                                                                                      cAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt        <  2:2100816/148‑1 (MQ=255)
                                                                                                                                         aataTGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg     <  2:934764/145‑1 (MQ=255)
                                                                                                                                         aaaaTGCGCC‑ACCGGTTGCGCAGACTCAAAAAACCGAAATGATTTAACCTCTTTAAGATAGTACGCCGCTTCCACAAAACCAGTTTGCCGCCTGTCAGCAAATGCTGGCGATTTTAGTTGCGGTGATAAACCCAGCGCTATTAATATg     >  2:6856/1‑148 (MQ=255)
                                                                                                                                         aaaaTGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg     >  2:1364065/1‑148 (MQ=255)
                                                                                                                                          aaaGGCGCA‑CCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc    <  1:1001246/148‑1 (MQ=255)
                                                                                                                                            ttGCGCA‑CCGGGTTCCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa  <  1:1281546/147‑1 (MQ=255)
                                                                                                                                            aggcgcA‑CCGGGTTCCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa  <  1:45721/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                            
ATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCA‑ACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCA  >  CP009273/3822193‑3822480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑