| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,869,943 | A→T | 15.5% | Y124N (TAC→AAC) | yidA ← | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,869,943 | 0 | A | T | 15.5% | 492.4 / 72.7 | 179 | Y124N (TAC→AAC) | yidA | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (82/69); new base T (16/12); total (98/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 186 total aligned reads displayed.
CGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTG > CP009273/3869800‑3870090 | cGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTg < 1:927731/148‑1 (MQ=255) cgcgcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCAc < 2:1035648/148‑1 (MQ=255) gcgcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACg < 1:268904/148‑1 (MQ=255) gcgcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACg < 1:268935/148‑1 (MQ=255) gcgcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACg < 1:503515/148‑1 (MQ=255) gcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGt < 2:1202132/148‑1 (MQ=255) aTAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTgg > 2:1602928/1‑148 (MQ=255) tAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGc > 2:2764007/1‑148 (MQ=255) ccTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGgt < 1:2468980/148‑1 (MQ=255) ccTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGgt < 1:2761388/148‑1 (MQ=255) ccTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGgt > 1:3011993/1‑148 (MQ=255) tGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGgtgt < 1:2767371/148‑1 (MQ=255) tGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGgtgt > 2:1270690/1‑148 (MQ=255) ggTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTa > 1:1801083/1‑148 (MQ=255) gTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTAc > 2:3275130/1‑148 (MQ=255) gTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTAc > 2:3275140/1‑148 (MQ=255) cGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAg > 1:603579/1‑148 (MQ=255) cGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAg < 1:1979500/148‑1 (MQ=255) ggATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCgt < 1:1938894/148‑1 (MQ=255) gATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCgtg > 1:1690958/1‑148 (MQ=255) aTGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCgtgg > 1:2475315/1‑148 (MQ=255) cGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCg < 2:2361577/148‑1 (MQ=255) gggTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCgg < 1:1090339/148‑1 (MQ=255) ggTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGt > 1:2440445/1‑148 (MQ=255) gTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTc < 1:25758/148‑1 (MQ=255) gTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTc < 2:419940/148‑1 (MQ=255) tcatcaATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCa < 1:2362503/148‑1 (MQ=255) atcaatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAgg > 1:1253201/1‑148 (MQ=255) atcaatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAgg > 1:1253526/1‑148 (MQ=255) atcaatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAgg > 1:1914286/1‑148 (MQ=255) caatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGc > 2:745442/1‑148 (MQ=255) tcatcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTg > 1:1905046/1‑148 (MQ=255) catcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTgg > 2:2419469/1‑148 (MQ=255) tcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaa > 1:1032444/1‑148 (MQ=255) tcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaa > 1:1032434/1‑148 (MQ=255) tcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaa < 2:3018596/148‑1 (MQ=255) tcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaa > 2:92649/1‑148 (MQ=255) catcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaaa > 1:2551575/1‑148 (MQ=255) catcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGaaa > 1:1169488/1‑148 (MQ=255) atcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAAt > 2:83343/1‑148 (MQ=255) tcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATg > 2:1498860/1‑148 (MQ=255) aCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgag < 2:3183542/148‑1 (MQ=255) aCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgag < 1:776649/148‑1 (MQ=255) cTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgaga > 2:2369894/1‑148 (MQ=255) tttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGaa < 2:848836/148‑1 (MQ=255) tttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGaa < 2:1039905/148‑1 (MQ=255) ttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAAc > 2:2682703/1‑148 (MQ=255) ttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAAc > 1:628598/1‑148 (MQ=255) ttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGAGGAATGGTGTCAACGAAGGATACATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAAc > 1:1655253/1‑148 (MQ=255) cAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCg < 2:772359/148‑1 (MQ=255) cAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCg < 2:537864/148‑1 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGa > 1:2006682/1‑148 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGa > 1:263875/1‑148 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGAc > 2:1066173/1‑148 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGAc > 2:1314886/1‑148 (MQ=255) gggTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTcgcg > 1:168787/1‑148 (MQ=255) gTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCgag < 1:98394/148‑1 (MQ=255) gTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCgag < 1:2419469/148‑1 (MQ=255) gTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGtttt > 1:2433339/1‑148 (MQ=255) ccATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATGTCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTc > 1:1952459/1‑148 (MQ=255) cATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTcc > 2:336874/1‑148 (MQ=255) ttttCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAg > 1:816744/1‑148 (MQ=255) tttCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAgg > 2:1712013/1‑148 (MQ=255) ctcCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGaaa > 1:1311591/1‑148 (MQ=255) ctcCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGaaa < 2:2412038/148‑1 (MQ=255) tcCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAAc > 2:531414/1‑148 (MQ=255) ccGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACg < 1:1452144/148‑1 (MQ=255) cGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGa < 1:2306411/148‑1 (MQ=255) gCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGAt < 1:104662/148‑1 (MQ=255) gCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGAt < 1:1983842/148‑1 (MQ=255) cTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGaga > 2:1838150/1‑146 (MQ=255) cTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATa > 2:2355376/1‑148 (MQ=255) cTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATa > 2:2588589/1‑148 (MQ=255) cTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGAAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAACTGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATa > 2:301533/1‑148 (MQ=255) tCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAgt > 2:2287584/1‑148 (MQ=255) cGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAgtc < 1:1192322/148‑1 (MQ=255) cAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAgtcgt < 1:1517133/148‑1 (MQ=255) acacCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATa < 2:221665/148‑1 (MQ=255) acCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTTTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGc < 1:2958131/148‑1 (MQ=255) aGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTga < 1:467016/148‑1 (MQ=255) gCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTgag < 2:401482/148‑1 (MQ=255) gCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTgag < 1:1168884/148‑1 (MQ=255) aTGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAg > 1:836965/1‑148 (MQ=255) tggtggCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGt < 1:2314868/148‑1 (MQ=255) ggtggCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGtt < 1:2511665/148‑1 (MQ=255) gCAACGAAGGATTCATGCACCGTGTAGTTGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTgcg > 1:1787249/1‑148 (MQ=255) cAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTgcgc < 2:643034/148‑1 (MQ=255) cAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTgcgc < 1:2839057/148‑1 (MQ=255) aCGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCa > 2:284331/1‑148 (MQ=255) cGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCAc > 1:219688/1‑148 (MQ=255) aaGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACgg > 2:334575/1‑148 (MQ=255) aGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTACAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGt > 2:3006936/1‑148 (MQ=255) ggATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTg > 1:1995414/1‑148 (MQ=255) gATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGc > 2:2130742/1‑148 (MQ=255) aTGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCa < 1:3231120/148‑1 (MQ=255) ccGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGc < 2:2004621/148‑1 (MQ=255) gtgtAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCgg > 1:515163/1‑148 (MQ=255) gtagCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTc < 2:3160074/148‑1 (MQ=255) gtagCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTc < 1:1606472/148‑1 (MQ=255) agCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTg > 2:574858/1‑148 (MQ=255) | CGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTG > CP009273/3869800‑3870090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |