| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,193,578 | G→T | 93.6% | D111Y (GAT→TAT) | zraR → | fused DNA‑binding response regulator in two‑component regulatory system with ZraS: response regulator/sigma54 interaction protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,193,578 | 0 | G | T | 93.6% | 442.4 / 20.6 | 155 | D111Y (GAT→TAT) | zraR | fused DNA‑binding response regulator in two‑component regulatory system with ZraS: response regulator/sigma54 interaction protein |
| Reads supporting (aligned to +/- strand): ref base G (4/6); new base T (77/68); total (81/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GGACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCTCGTCG > CP009273/4193433‑4193722 | ggACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTAt < 1:3132738/148‑1 (MQ=255) gACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCtata > 2:576632/1‑148 (MQ=255) gtcATAGCCACGCTGTAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGGGTACTCCAGCGTCGTGACGGCGGTAGAGGCACTGAAAACTGGGGCTCTGGATTATGTCTTCAATCCGCTGGATTTCTATAAcc < 1:2968095/146‑1 (MQ=255) gCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCt < 1:1286940/148‑1 (MQ=255) cATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTa < 2:847780/148‑1 (MQ=255) aTCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTAc < 2:3065916/148‑1 (MQ=255) tCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACa < 1:381627/148‑1 (MQ=255) gAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTg > 2:2812248/1‑148 (MQ=255) aaaGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTgg > 1:1287253/1‑148 (MQ=255) aaGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACATACAGGCGACGCTGGa > 2:920354/1‑148 (MQ=255) agagATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaa > 2:1653143/1‑148 (MQ=255) agagATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaa > 2:1653050/1‑148 (MQ=255) agagATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaa > 2:1128899/1‑148 (MQ=255) agaTCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaaaa < 1:898398/148‑1 (MQ=255) agaTCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaaaa < 1:898363/148‑1 (MQ=255) agaTCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaaaa < 1:710624/148‑1 (MQ=255) agaTCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGaaaa < 1:2371059/148‑1 (MQ=255) tCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAgc > 1:2375900/1‑148 (MQ=255) cAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAgcg < 2:2613719/148‑1 (MQ=255) aaGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCt > 2:2956064/1‑148 (MQ=255) aaGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCt > 2:433353/1‑148 (MQ=255) tAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCa > 1:3258986/1‑148 (MQ=255) tAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCa < 1:102733/148‑1 (MQ=255) tAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCa < 1:102671/148‑1 (MQ=255) aaaCCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCAt < 1:377847/148‑1 (MQ=255) aaCCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATa < 1:2265940/148‑1 (MQ=255) cccGGCAATTCCGGTGCTTATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACg < 1:295088/148‑1 (MQ=255) cccGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACg < 2:1997069/148‑1 (MQ=255) cccGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACg < 2:1997063/148‑1 (MQ=255) cccGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACg > 1:1556058/1‑148 (MQ=255) cGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGca < 1:576632/148‑1 (MQ=255) ggCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGcac > 1:2809083/1‑148 (MQ=255) gCAATTCCGGTGCTGATTCTGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGcaca < 2:2366880/148‑1 (MQ=255) cAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAg > 2:1890254/1‑148 (MQ=255) aaTTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGt < 1:2399409/148‑1 (MQ=255) aaTTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCGGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGt < 1:1399702/148‑1 (MQ=255) ttCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTAt > 2:2308531/1‑148 (MQ=255) ttCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTAt < 2:2184863/148‑1 (MQ=255) ttCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTAt > 2:1735823/1‑148 (MQ=255) ccGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTg < 2:158138/148‑1 (MQ=255) ccGGTGCTGATTATCACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTg < 1:563507/148‑1 (MQ=255) gTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATg < 2:2213961/148‑1 (MQ=255) gTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATg < 2:2728400/148‑1 (MQ=255) tGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGc < 2:3171329/148‑1 (MQ=255) tGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGc > 1:1281711/1‑148 (MQ=255) gCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCt > 1:2793522/1‑148 (MQ=255) aTTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGaaa > 2:808756/1‑148 (MQ=255) tATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAaca < 2:2113192/148‑1 (MQ=255) tGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCg > 1:289699/1‑148 (MQ=255) tGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCg > 1:289994/1‑148 (MQ=255) tACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTCTTGATGCTGAAACACCTGCGGTGa > 2:40570/1‑148 (MQ=255) tACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGa < 2:2014226/148‑1 (MQ=255) cGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTgccagc > 2:1879449/1‑148 (MQ=255) gagaCGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGt < 1:726376/148‑1 (MQ=255) aCGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCg < 1:2521119/148‑1 (MQ=255) aCGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCg > 2:822782/1‑148 (MQ=255) aCGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCg > 2:822623/1‑148 (MQ=255) ggcggTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGt > 2:3216847/1‑148 (MQ=255) tAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGt < 1:2155280/148‑1 (MQ=255) tAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGt > 1:3021345/1‑148 (MQ=255) tAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGt < 1:2155006/148‑1 (MQ=255) tAGAGGAACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAAACTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACAACTGCGGTGACTGCCAGCCAGTTCGTGATGGt > 1:1374159/1‑148 (MQ=255) agagGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTCTGGTc > 2:340673/1‑148 (MQ=255) agagGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTc > 2:340642/1‑148 (MQ=255) agagGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTc > 1:2889743/1‑148 (MQ=255) agagGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTc > 2:379446/1‑148 (MQ=255) gagGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCg < 1:1860241/148‑1 (MQ=255) agGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCgg > 2:3161301/1‑148 (MQ=255) aCTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTaaa < 1:2004618/148‑1 (MQ=255) gAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGc < 2:1286896/148‑1 (MQ=255) gAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGc < 2:1287253/148‑1 (MQ=255) aaaCTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGccc > 1:2006361/1‑148 (MQ=255) aaCTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCg > 2:2050172/1‑148 (MQ=255) aaCTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCg > 2:2049201/1‑148 (MQ=255) aCTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGcc > 1:134220/1‑145 (MQ=255) tGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCg < 1:2812248/148‑1 (MQ=255) gggCGCTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGAt > 1:2518737/1‑148 (MQ=255) cgcTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCa < 1:1128899/148‑1 (MQ=255) cgcTGGATTATCTAATCTAGCCGCTGGATTTCTATAACCTTCAGGCGACGCTGGAAAAAGCGCTCGAGCATACGCACAGTATTGATGCTGAAACACATGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCa < 2:2521747/148‑1 (MQ=255) gcTGGATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCaa < 2:1947523/148‑1 (MQ=255) tGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAaca < 2:1260055/148‑1 (MQ=255) gATTATCTCATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACAcc > 2:2197216/1‑148 (MQ=255) aTTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCt > 1:3110002/1‑148 (MQ=255) tctcATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTc > 2:3290655/1‑148 (MQ=255) ctcATCAAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCa > 2:1971349/1‑148 (MQ=255) tcatcaAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAg > 2:294986/1‑148 (MQ=255) catcaAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGt > 2:1558365/1‑148 (MQ=255) catcaAGCCGCGGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGt > 2:61757/1‑148 (MQ=255) atcaAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTg > 1:3230929/1‑148 (MQ=255) atcaAGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTg > 1:2720608/1‑148 (MQ=255) aaGCCGCTGGATTTCTATAACCTACCGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGaaa < 2:244137/148‑1 (MQ=255) aaGCCGCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGaaa > 2:1149663/1‑148 (MQ=255) gCTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGcc < 1:1803220/148‑1 (MQ=255) cTGGATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGccc < 1:433353/148‑1 (MQ=255) ggATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtc > 2:2513073/1‑148 (MQ=255) ggATTTCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtc > 2:2513109/1‑148 (MQ=255) tttCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtcgtc > 1:155883/1‑148 (MQ=255) ttCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtcgtcg > 1:2512616/1‑148 (MQ=255) ttCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtcgtcg < 1:3052101/148‑1 (MQ=255) ttCTATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCtcgtcg > 1:2585648/1‑148 (MQ=255) | GGACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCTCGTCG > CP009273/4193433‑4193722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |