| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,194,861 | G→T | 11.9% | G333G (GGC→GGA) | purD ← | phosphoribosylglycinamide synthetase phosphoribosylamine‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,194,861 | 0 | G | T | 11.9% | 470.1 / 28.2 | 145 | G333G (GGC→GGA) | purD | phosphoribosylglycinamide synthetase phosphoribosylamine‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base G (61/66); new base T (11/7); total (72/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 150 total aligned reads displayed.
CCCGCCGTTGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCAATA > CP009273/4194714‑4195008 | cccgccGTTGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACg > 2:2559249/1‑148 (MQ=255) gccgTTGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCg < 2:1139202/148‑1 (MQ=255) ttGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCgagag > 2:424733/1‑148 (MQ=255) ttGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCgagag > 2:1433495/1‑148 (MQ=255) ggTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGaa < 1:628022/148‑1 (MQ=255) cACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAgcg > 1:111620/1‑148 (MQ=255) cACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAgcg > 1:2981447/1‑148 (MQ=255) cTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGcgcg > 2:1021041/1‑148 (MQ=255) cTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGcgcg > 1:2453005/1‑148 (MQ=255) tACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGt > 2:3231180/1‑148 (MQ=255) ccTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTc > 1:155807/1‑148 (MQ=255) cTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCa > 1:3215062/1‑148 (MQ=255) tGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCAt > 1:80286/1‑148 (MQ=255) gCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATc > 1:3099799/1‑148 (MQ=255) gCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATc > 1:3099782/1‑148 (MQ=255) cTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATcc > 1:2963231/1‑148 (MQ=255) cGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCa < 2:579611/148‑1 (MQ=255) tCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACt < 2:1295718/148‑1 (MQ=255) cATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTc > 1:1923000/1‑148 (MQ=255) tCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCgg > 2:2050739/1‑148 (MQ=255) ccGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGa < 1:2422364/148‑1 (MQ=255) ccAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGt < 2:3027802/148‑1 (MQ=255) cAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGtt < 2:911413/148‑1 (MQ=255) aGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGttt < 1:2103776/148‑1 (MQ=255) gTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGtttt > 1:1955979/1‑148 (MQ=255) gTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGtttt < 2:238709/148‑1 (MQ=255) tgCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTAGTc < 2:2233178/148‑1 (MQ=255) cgcgTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGTAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGt < 2:2304197/148‑1 (MQ=255) cgcgTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGt < 2:34531/148‑1 (MQ=255) gcgTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGtt < 2:938454/148‑1 (MQ=255) cgTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGttt > 1:2176435/1‑148 (MQ=255) cgTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGttt > 1:2176662/1‑148 (MQ=255) gTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTg < 2:1631275/148‑1 (MQ=255) tGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGc < 2:2225512/148‑1 (MQ=255) ggAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCt > 1:1229353/1‑148 (MQ=255) ggAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCt > 1:1229347/1‑148 (MQ=255) gAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCtt > 2:1190945/1‑148 (MQ=255) aaCACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCttt < 1:1921714/148‑1 (MQ=255) aaCACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCttt > 1:396792/1‑148 (MQ=255) aaCACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCttt < 1:1921749/148‑1 (MQ=255) acacTTTGCCGCCTGCCACGTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAAGCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTc < 2:2207152/148‑1 (MQ=255) cacTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTca > 1:2476741/1‑148 (MQ=255) acTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTcac < 2:1600814/148‑1 (MQ=255) cTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTcaca > 1:56590/1‑148 (MQ=255) cTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTcaca < 1:3210197/148‑1 (MQ=255) ttGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAgg > 2:3190546/1‑148 (MQ=255) gccTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGgccgcc < 2:2450331/148‑1 (MQ=255) ccACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCa > 1:2724891/1‑148 (MQ=255) ttcttcCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGc > 2:446493/1‑148 (MQ=255) tcttcCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCt > 2:2416329/1‑148 (MQ=255) tcCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCaa < 1:1403879/148‑1 (MQ=255) tcCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCaa < 1:1405540/148‑1 (MQ=255) gCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAg < 1:2068733/148‑1 (MQ=255) gCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATc < 2:1465190/148‑1 (MQ=255) cAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCg < 1:264167/148‑1 (MQ=255) gCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGAc < 2:2702477/148‑1 (MQ=255) gTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTc < 1:716872/148‑1 (MQ=255) tCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACCGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATgcg > 1:2697543/1‑148 (MQ=255) tCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATgcg > 2:504222/1‑148 (MQ=255) cACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCAt > 2:1885126/1‑148 (MQ=255) cACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCAt > 2:216755/1‑148 (MQ=255) cACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTGTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCAt > 2:1441865/1‑148 (MQ=255) aCCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATa > 2:780108/1‑148 (MQ=255) ccGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATaa < 2:1295664/148‑1 (MQ=255) ccGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATaa > 2:1531390/1‑148 (MQ=255) cGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAAt > 2:612602/1‑148 (MQ=255) tGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCgg < 1:2671863/148‑1 (MQ=255) gCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGc < 1:3297634/148‑1 (MQ=255) tAATCACCCGGATATCCACCCGCAGCCATCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTggg > 2:1138132/1‑148 (MQ=255) aTCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGtt < 2:2689470/148‑1 (MQ=255) aTCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGtt > 2:1285877/1‑148 (MQ=255) aTCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGAACGGACTTCATGCGCAGCATAATCGGCTGGGtt > 2:505829/1‑148 (MQ=255) tCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGttt < 1:2337176/148‑1 (MQ=255) tCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGttt < 2:3099782/148‑1 (MQ=255) cACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTc > 2:797498/1‑148 (MQ=255) cACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACGCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTc < 1:1004739/148‑1 (MQ=255) cGGATATCCACCCGCAGCCATCACCCCGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCCCAGGCCGCCAGGCAGAGCTCACCCAGATCGGACTGCATGCGCAGCATAATCGGCTGGGTTTCCGGa < 2:2777184/148‑1 (MQ=255) cGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGTGTTTCCGGa < 2:1739384/148‑1 (MQ=255) tatCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGc > 2:198062/1‑148 (MQ=255) ccACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCaa < 2:1603563/148‑1 (MQ=255) cACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCaaa < 1:142328/148‑1 (MQ=255) aCCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAg < 1:1308913/148‑1 (MQ=255) aCCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAg < 1:716757/148‑1 (MQ=255) aCCCGAAGCCTTCCCCCCGCCGAGAGAAGCGCGTTCATCCCACTCGGACTTTTTCTCGTCCTGTTTGCTTGCACAGGCCGCCTGGCAGAGGTCAACCAGAGCGGAATTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAg < 1:717125/148‑1 (MQ=255) gCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCACCCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGt < 1:1046339/148‑1 (MQ=255) gCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGAGCGGACTTCTTGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGt < 1:738203/148‑1 (MQ=255) ccATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGtt > 2:2593873/1‑148 (MQ=255) ccATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAAGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGtt > 2:1132972/1‑148 (MQ=255) caaTCACCACTCCTAGAGAAGCGCGTTCATCCCACTCGGACTTTTTCTCGTCCAGTTTGCTTACACAGGCCGCCCGGCAGCGCTCAACCCGATCGGACTTCATGCGCAGAATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGtt < 1:646122/146‑1 (MQ=255) aTCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTaa < 2:2176662/148‑1 (MQ=255) aTCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTaa < 2:396340/148‑1 (MQ=255) aTCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCACGTCCTGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCACATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTaa < 1:424733/148‑1 (MQ=255) aTCACCACGCCGAGAGAAGCGCGTTCATCCCACACCGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCATATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTaa < 1:1290969/148‑1 (MQ=255) tCACCACTCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTaaa > 1:3150247/1‑148 (MQ=255) caccacGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAAt > 2:2918858/1‑148 (MQ=255) cacGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCCGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCa < 1:2050305/148‑1 (MQ=255) cacGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCa < 1:2050739/148‑1 (MQ=255) cGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCACGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGAATTCATGCGCACCATAAACGGCTGGGTTTCCGGATCGCCCAACCGGCAGTTAAAATCAAt > 1:1176942/1‑148 (MQ=255) gCCGAGAGACGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGAATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCAATa < 1:80760/148‑1 (MQ=255) gCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCAATa < 1:490407/148‑1 (MQ=255) | CCCGCCGTTGGTCACTACCTGCTCGTCATCCGCCAGTTTTGTGCCCGCGTGGAACACTTTGCCGCCTGCCACTTCTTCCAGCGGCAGGCCGTGGATCACGTCACCGGTGCGGTAATCACCCGGATATCCACCCGCAGCCATCACCACGCCGAGAGAAGCGCGTTCATCCCACTCGGACGTTTTCTCGTCCAGTTTGCTTTCACAGGCCGCCAGGCAGAGCTCAACCAGATCGGACTTCATGCGCAGCATAATCGGCTGGGTTTCCGGATCGCCAAAGCGGCAGTTAAATTCAATA > CP009273/4194714‑4195008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |