| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,236,666 | C→A | 93.2% | intergenic (‑319/‑46) | malE ← / → malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,236,666 | 0 | C | A | 93.2% | 421.3 / 19.0 | 160 | intergenic (‑319/‑46) | malE/malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Reads supporting (aligned to +/- strand): ref base C (6/6); new base A (73/73); total (79/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
TTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCGTGGT > CP009273/4236521‑4236809 | ttttGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcataat > 1:1671299/1‑148 (MQ=255) caagcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATaatgaatg < 1:970038/148‑1 (MQ=255) caagcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATaatgaatg < 1:1871369/148‑1 (MQ=255) agcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGtt > 1:1030590/1‑148 (MQ=255) agcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGtt > 2:1119027/1‑148 (MQ=255) agcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAGTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGtt > 2:2332453/1‑148 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGc > 1:1478682/1‑148 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGc > 1:1478779/1‑148 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGc > 1:1957940/1‑148 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGc > 1:1900073/1‑148 (MQ=255) cATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGt > 2:2180406/1‑148 (MQ=255) cATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGt > 2:14438/1‑148 (MQ=255) tCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCg < 1:141373/148‑1 (MQ=255) cACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTTTACTAATCCTCCCGCCTCCTCACCCATAAAAAAGCCAGGGGGAGGAGGATTAAAGCCATCTCATCAACACGCATAGTCAGCACAAAAAGAATGTAGATGTCGa > 1:418206/1‑148 (MQ=255) cACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGa > 1:2336065/1‑148 (MQ=255) cACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGa > 1:2336070/1‑148 (MQ=255) cACGAAATTCATTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTAATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGa < 2:418206/148‑1 (MQ=255) aCGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGAt < 1:2624465/148‑1 (MQ=255) cGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATg < 2:3197857/148‑1 (MQ=255) cGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATg < 2:551599/148‑1 (MQ=255) gAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGa > 2:2097160/1‑148 (MQ=255) aaTTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACa < 1:820437/148‑1 (MQ=255) tCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGgt > 1:2457267/1‑148 (MQ=255) tCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGgt > 1:1422460/1‑148 (MQ=255) ccTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGgtt < 1:1395642/148‑1 (MQ=255) cTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGgttg < 2:257698/148‑1 (MQ=255) aCCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAg > 2:2749814/1‑148 (MQ=255) tCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGga < 2:3163871/148‑1 (MQ=255) ttAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAgg > 2:1609859/1‑148 (MQ=255) tAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAggg < 2:3069797/148‑1 (MQ=255) aGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGc < 1:3103694/148‑1 (MQ=255) aGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCACCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGc < 1:3103728/148‑1 (MQ=255) gTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCa < 1:1599752/148‑1 (MQ=255) ttCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCAt > 2:2966847/1‑148 (MQ=255) tCACAGAAGACGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATCACGCATAGACAGCCCATCATGAATGTTGCTGTCGATGAAAGGTTGTTAAAAAGGGAGAACAGCAtc > 2:1682459/1‑147 (MQ=255) acaGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGc > 1:2060859/1‑148 (MQ=255) caGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCg > 1:762893/1‑148 (MQ=255) gAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAg < 2:2113732/148‑1 (MQ=255) aaGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGc > 1:312546/1‑148 (MQ=255) aGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCg > 1:785049/1‑148 (MQ=255) tgtTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAg > 2:237822/1‑148 (MQ=255) cATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTCCAGCTGCaa > 2:2907816/1‑148 (MQ=255) aTCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCaaa < 1:2320917/148‑1 (MQ=255) ctccCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATGATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATg < 2:62935/148‑1 (MQ=255) ctccCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATg > 1:540872/1‑148 (MQ=255) tccCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGt > 1:2177474/1‑148 (MQ=255) tccCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGt > 2:228056/1‑148 (MQ=255) tccCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGt > 2:127030/1‑148 (MQ=255) cccGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTa < 2:2794954/148‑1 (MQ=255) ccGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTaa < 2:3026469/148‑1 (MQ=255) ctcctcCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGaa < 1:2754293/148‑1 (MQ=255) tcctccCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTCCAGCTGCAAAATGTAACGaaa > 2:884473/1‑148 (MQ=255) cctccCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAg < 2:1093238/148‑1 (MQ=255) ctccCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGc > 1:483676/1‑148 (MQ=255) ctccCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGc > 1:2146875/1‑148 (MQ=255) tccCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGcc < 2:2104293/148‑1 (MQ=255) ccATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTggg < 2:2325805/148‑1 (MQ=255) aTAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGc > 1:2204408/1‑148 (MQ=255) aTAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGc > 2:198934/1‑148 (MQ=255) aTAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGc > 1:398323/1‑148 (MQ=255) taataaAGCCTGGGGGTTGTTTATTTAAGACATCTCCTGATGACGAATAGTCAGCCCATTATGAATGTTGCTGTCGATGACAGGTTGTTACATAGGGAGAAGGTCATGGCTAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCg < 1:2823644/148‑1 (MQ=255) tAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCg < 1:2979190/148‑1 (MQ=255) aaaaGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAgg < 2:1899120/148‑1 (MQ=255) aGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACACAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAACTGTAACGAAAGCCTGGGGCGAGGTct < 2:3249486/148‑2 (MQ=255) gCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGt < 1:891565/148‑1 (MQ=255) cAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTgg < 1:1072500/148‑1 (MQ=255) gggggTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTa < 1:519405/148‑1 (MQ=255) ggggTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTAt < 1:657285/148‑1 (MQ=255) ggggTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTAt > 2:2669601/1‑148 (MQ=255) ggggTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTAt < 1:114542/148‑1 (MQ=255) ggggTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTAt > 1:2686660/1‑148 (MQ=255) gaggaTTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAg < 2:953240/148‑1 (MQ=255) gaggaTTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAg > 1:3193098/1‑148 (MQ=255) gaggaTTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAg < 2:1810322/148‑1 (MQ=255) ttAAGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCa < 1:1016385/148‑1 (MQ=255) aGCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAAtc < 2:1264835/148‑1 (MQ=255) gCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTCCAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAAtct > 1:2812192/1‑148 (MQ=255) gCCATCTCCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAAtct > 2:2125834/1‑148 (MQ=255) tctcCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGat < 2:2686660/148‑1 (MQ=255) ctcCTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGata > 1:3211518/1‑148 (MQ=255) ccTGATGACGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACCGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATc > 2:2770953/1‑148 (MQ=255) aCGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAg > 2:2643487/1‑148 (MQ=255) aCGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAg > 2:2643596/1‑148 (MQ=255) aCGCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAg < 2:799184/148‑1 (MQ=255) gCATAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCATGGTATCGAAAGATATCAATCTCGATATCCATGAAGGt < 2:1030590/148‑1 (MQ=255) tAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGaa < 2:1985306/148‑1 (MQ=255) tAGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGaa < 2:1876843/148‑1 (MQ=255) aGTCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAAt < 2:2204408/148‑1 (MQ=255) tCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTc > 1:2398036/1‑148 (MQ=255) tCAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTc > 2:2908745/1‑148 (MQ=255) cAGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCg > 2:511304/1‑148 (MQ=255) aGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgt < 2:2910345/148‑1 (MQ=255) aGCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgt > 2:1248534/1‑148 (MQ=255) gCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtg < 1:2675172/148‑1 (MQ=255) gCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtg < 1:1797686/148‑1 (MQ=255) gCCCATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtg < 1:125494/148‑1 (MQ=255) cccATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtgg > 2:2530398/1‑148 (MQ=255) cccATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATATCGATATCCATGAAGGTGAATTCgtgg > 2:2530379/1‑148 (MQ=255) ccATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtggt < 1:2416283/148‑1 (MQ=255) ccATAATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCgtggt > 1:166479/1‑148 (MQ=255) | TTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGATGACAGGTTGTTACAAAGGGAGAAGGGCATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCGTGGT > CP009273/4236521‑4236809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |