| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 408,142 | C→A | 8.4% | R1023L (CGT→CTT) | sbcC ← | exonuclease, dsDNA, ATP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 408,142 | 0 | C | A | 8.4% | 884.7 / 35.3 | 261 | R1023L (CGT→CTT) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (120/118); new base A (10/13); total (130/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
TGCAGGATAACGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACGTGTTT > CP009273/407996‑408289 | tGCAGTATAACGACCAGCAAGGCCAAGAGATAAGTCGCCCCTCTTTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACg < 2:1223800/148‑1 (MQ=255) gATAACGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCtt > 1:2490976/1‑148 (MQ=255) tAACGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTc < 1:913681/148‑1 (MQ=255) tAACGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTc < 1:1008134/148‑1 (MQ=255) aaCGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCa > 1:1650336/1‑148 (MQ=255) cGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTttcttc > 1:448533/1‑148 (MQ=255) cGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATc > 2:3223180/1‑148 (MQ=255) cAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCtt < 2:1538458/148‑1 (MQ=255) aGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATCTTTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCtt > 1:1880616/1‑148 (MQ=255) ggCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGt > 1:500710/1‑148 (MQ=255) gCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTg < 1:2006103/148‑1 (MQ=255) agagATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTa < 2:2358195/148‑1 (MQ=255) gagaTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTaa > 1:1782643/1‑148 (MQ=255) gagaTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTaa > 1:765662/1‑148 (MQ=255) gagaTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTACCAGTTTGCTGTAGCCCAGGCCGATGATC‑TTTTTAACTTTGATCTGCACCGGAATACGCTCTTTCATCGCATCTAAGTGGCTaa > 2:2097676/1‑148 (MQ=255) agaTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAAt > 1:1945438/1‑148 (MQ=255) agaTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAAt < 1:1636361/148‑1 (MQ=255) aTAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATca > 1:2157241/1‑148 (MQ=255) tAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATcac < 1:206657/148‑1 (MQ=255) ttCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCAAAcc > 2:2054417/1‑148 (MQ=255) tCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCg > 2:3029427/1‑148 (MQ=255) tCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCg > 2:3100844/1‑148 (MQ=255) gCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGAt > 2:1614406/1‑148 (MQ=255) ccccTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTAACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATg > 1:1261420/1‑148 (MQ=255) ccTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTGACTTTGATCTGCACCGGAATACGCTCTTTCATCGCGTCTACGTGGCTAATCACACCGATGGt > 1:2778987/1‑148 (MQ=255) ccTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGt > 1:2225926/1‑148 (MQ=255) tctGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGttt > 2:1013502/1‑148 (MQ=255) gTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTaa < 1:1555508/130‑1 (MQ=255) aTTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCa > 2:57637/1‑148 (MQ=255) aTTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTCCCa > 2:1731727/1‑148 (MQ=255) cATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTg < 1:134652/148‑1 (MQ=255) tATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCg < 1:3204200/148‑1 (MQ=255) ccTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTc > 2:2161497/1‑148 (MQ=255) ccTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTc > 2:1168137/1‑148 (MQ=255) ctgctgAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCa > 2:1380976/1‑148 (MQ=255) ctgctgAATAGTTATTTCACTGCAAACGTACTTTCCAGTTGGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCa < 2:1808780/148‑1 (MQ=255) tgAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGc < 2:3017082/148‑1 (MQ=255) aaTAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCAt < 2:502523/148‑1 (MQ=255) aTAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATc < 2:2434976/148‑1 (MQ=255) aTAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATc < 2:267033/148‑1 (MQ=255) tAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATcc < 1:3252570/148‑1 (MQ=255) tAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATcc < 2:2585570/148‑1 (MQ=255) ttATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAgc > 2:2479120/1‑148 (MQ=255) ttATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATATGCCCCGGTATACGCTCTTTAATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAgc > 1:989798/1‑148 (MQ=255) aTTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAgcgc > 2:1936203/1‑148 (MQ=255) aTTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAgcgc < 1:579799/148‑1 (MQ=255) tttCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCa > 2:2167305/1‑148 (MQ=255) cACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCa < 1:2719546/148‑1 (MQ=255) cTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAg > 2:9616/1‑148 (MQ=255) cTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATA‑TTTTTCACTTTGATCTGCACCGGAATACGCTCGTTCATCGCTTCTACGTGGCGAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCCTCAAg > 1:873872/1‑148 (MQ=255) tGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAgg < 2:3161598/148‑1 (MQ=255) aaCGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGGGTTCAGGGCATCCAGCGCATCAAGGGCgg > 2:3303110/1‑148 (MQ=255) aCGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGt > 2:2407727/1‑148 (MQ=255) aCGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGt > 2:2089286/1‑148 (MQ=255) aCGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGt > 2:2908107/1‑148 (MQ=255) aCGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGt < 1:2150369/148‑1 (MQ=255) cGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTCTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTa > 2:114856/1‑148 (MQ=255) aCTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATcc > 2:758297/1‑148 (MQ=255) aCTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATcc < 1:1826218/148‑1 (MQ=255) tttCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAg < 2:2931683/148‑1 (MQ=255) ttCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGc > 2:260780/1‑148 (MQ=255) tCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCg < 2:181159/148‑1 (MQ=255) tttGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCg < 2:1901045/148‑1 (MQ=255) tttGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGGATCCAGCGTTTCg > 1:1378368/1‑148 (MQ=255) gCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTa < 1:85428/148‑1 (MQ=255) gCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTa > 2:1186065/1‑148 (MQ=255) cTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTAt < 2:1927133/148‑1 (MQ=255) tGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATc < 2:1591496/148‑1 (MQ=255) gTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATcc < 1:2638501/148‑1 (MQ=255) cAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTg > 2:2149243/1‑148 (MQ=255) cGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCaaa > 1:338317/1‑148 (MQ=255) cGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTATACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCaaa > 1:3087784/1‑148 (MQ=255) cGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCaaa < 2:141691/148‑1 (MQ=255) tGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAAcc < 2:939519/148‑1 (MQ=255) tGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAAcc > 1:2441665/1‑148 (MQ=255) gATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCt < 1:1085826/148‑1 (MQ=255) aTC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCCAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCtt > 1:970561/1‑148 (MQ=255) tC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGt > 2:913190/1‑121 (MQ=255) tC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTtc > 2:1800957/1‑148 (MQ=255) c‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTtca < 1:2609954/148‑1 (MQ=255) c‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTtca > 1:380203/1‑148 (MQ=255) ttttCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTtcatc > 1:284352/1‑148 (MQ=255) cACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAgg < 1:828924/148‑1 (MQ=255) cTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGaa < 1:2079777/148‑1 (MQ=255) cTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGaa > 2:1491422/1‑148 (MQ=255) tttGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAAc < 1:1516135/148‑1 (MQ=255) ttGATCTGCACCGGAATAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACa < 1:1186065/148‑1 (MQ=255) tCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGa > 1:1819797/1‑148 (MQ=255) cTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAg < 1:2329695/148‑1 (MQ=255) tGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGTGAGt < 2:2489826/148‑1 (MQ=255) cACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCa > 1:2355014/1‑148 (MQ=255) cACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCa > 2:1863069/1‑148 (MQ=255) cGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATa > 2:396488/1‑148 (MQ=255) gAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCTATGGTTTTGACACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTAACCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACg > 1:267181/1‑148 (MQ=255) gAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACg > 1:3039042/1‑148 (MQ=255) aaTACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACgt > 1:2020156/1‑148 (MQ=255) aTACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACgtg < 2:1512005/148‑1 (MQ=255) aTAAGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACgtg < 2:2230331/148‑1 (MQ=255) aCGCTCTTTCTTCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACGTGtt < 2:448533/148‑1 (MQ=255) aCGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACGTGtt < 1:1886131/148‑1 (MQ=255) | TGCAGGATAACGACCAGCAAGGCCAAGAGATAATTCGCCCCTCTGTATTCATTATCCTGCTGAATAGTTATTTCACTGCAAACGTACTTTCCAGTTTGCTGTAGCCCAGGCCGTTGATC‑TTTTTCACTTTGATCTGCACCGGAATACGCTCTTTCATCGCTTCTACGTGGCTAATCACACCGATGGTTTTGCCACTGGCGTTCAGGGCATCCAGCGCATCAAGGGCGGTATCCAGCGTTTCGCTATCCAGCGTGCCAAAACCTTCATCAAGGAACAGCGAGTCAATACGTGTTT > CP009273/407996‑408289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |