| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 503,944 | G→T | 90.9% | E91* (GAA→TAA) | ybaQ → | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 503,944 | 0 | G | T | 90.9% | 410.7 / 31.3 | 192 | E91* (GAA→TAA) | ybaQ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (9/10); new base T (79/89); total (93/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
GCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGCC > CP009273/503800‑504088 | gCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAAt < 1:105599/148‑1 (MQ=255) cACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAAtt < 1:454788/148‑1 (MQ=255) cACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAAACACCACGCGGCGGGTGATCTTTTGGTAGTTGAAAACAACAATCGCACCCACGAATAAtt > 1:1310114/1‑148 (MQ=255) cTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTgg < 2:1420333/148‑1 (MQ=255) cTGATCAATAACAATCGTAAACTCACGACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTAGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAATCAACATGCGCACCCAGGAATAATTgg < 2:3134455/148‑1 (MQ=255) gATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAACCTCCAGGCGGCGGTTGTTAGTTGGGAAGGTGAAAACAAAATGCGCACCCCCGCATAATTgggg > 2:294847/1‑147 (MQ=255) aTAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGGTAAAACTCCAGGCGGCGGTTGTTGTTTTGGAAATTGAAAACAAAAATCGCACCCAGGAATAAATGGGAAGGAt > 1:2144749/1‑148 (MQ=255) aTAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAAACTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCCGGAATAATTGGGCCGGAt > 2:2299959/1‑148 (MQ=255) tAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGAtt > 2:2216093/1‑148 (MQ=255) tAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGAGTTTTTTCTAAAACTACAGGCGGCCGTTGTTGTTTTGGTAGGTTTAAACAACAATCGCACCCAGGCATAATTTGGTCGGAtt > 1:376153/1‑148 (MQ=255) aaTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGaaa < 1:67800/148‑1 (MQ=255) aaTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGaaa < 1:1670717/148‑1 (MQ=255) gaaaaCTCACGACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGt < 1:1702343/146‑1 (MQ=255) aaaCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGTTCTTTGGGAAGTTTAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTTAAACAGTgg > 2:33436/1‑148 (MQ=255) aaaCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTgg < 1:716142/148‑1 (MQ=255) aaaCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAAGTGGGACGGATTGAAACAGTgg > 2:821981/1‑148 (MQ=255) aaaCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTgg < 1:2003423/148‑1 (MQ=255) aaaCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCACCAGGCGGCGGGTGTTCGTTGGGAAGTTGAAAACAAAATGCGCACCCAGGAATCATTGGGCCGGATTGAAAAAGTgg > 2:2478603/1‑148 (MQ=255) cTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGGTAAAACTACAGGCGGCGGGTGTTCTTTGGGTAGTTGTAAACAACATGCGCACCCCGGCAAAATTTGGACGGATTTAAAAAGTGGcgg > 1:1756309/1‑146 (MQ=255) tCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGa < 1:2677655/148‑1 (MQ=255) cACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAAACTCCAGGCGGCGGGTGATCTTTGGGAAGTTGAAAACAACAGGCGCACCCACGAAAAATTGGGACGGATTGAAACAGTgggggaa > 2:3208471/1‑143 (MQ=255) cACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGaa < 2:711806/148‑1 (MQ=255) ctactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACTGTCGATTTTTGGCTAAACCTCCAGGCGTCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAata < 2:990609/148‑1 (MQ=255) ctactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAata < 1:2392219/148‑1 (MQ=255) tactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGTTCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACCGTGGCTGAatat > 2:2980960/1‑148 (MQ=255) actGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGGTTAACCTCCCGGCGGCGGTTGTTATTTGGGGAGTTGTTAACAACATGCGCCCCCCGGGAGGATTGGGGCGGGGTGAGACAGGGGGGGGATAtt > 1:2339769/1‑148 (MQ=255) tGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACg < 2:457061/148‑1 (MQ=255) tGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACg < 2:2322507/148‑1 (MQ=255) ggCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGAGTTTTGGGTAAAACACCAGGCGGCGGGTGTTGGTTGGGAAGTTGAAAAAAACATTCGCACCCAGGAAAAATTGGGGCGGGTTTAAAAAGTGGCTGAATATTTTGGACGc > 1:3253258/1‑148 (MQ=255) ttCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATACTTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGa < 1:3208471/148‑1 (MQ=255) ttCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCACCAGGCGGCGGGTGATCTTTGGGAAGTTGAAAAAAAAATGCGCACCCAGGAATAATTGGGACGGATTTAAACAGTGGCTGTATATTTGGCACGCCGTGa > 2:813505/1‑148 (MQ=255) cGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAag < 1:1391307/148‑1 (MQ=255) ggCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGt < 1:1085527/148‑1 (MQ=255) cGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAAAAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGTCACGCCGTGAAGAGCGTGc > 2:1651082/1‑148 (MQ=255) aaaGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCaa < 1:2075800/148‑1 (MQ=255) aaGTTTTTGATACCACAGTCGATTTTTGGCTAAACCACCAGGCGGCGGTTTATCTTTGGGAAGTTGAAAACAAACTGCGCACCCCGGAATAATTGGGACGGATTGAAACAGTGGCGGGATATTTGGCACGCCGTGAATAGCGGGCaaa > 2:718031/1‑148 (MQ=255) gTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATATTTGGGAAGTTGAAAACAACAAGCGCACCCCGGAATAATTGGGACGGATTGAAACAGTTGCTGAATATTTGGCACGCCGTGCAGAGCGTGCaaaaa > 2:1495836/1‑148 (MQ=255) tttttGATACCACAGTCGATTTTTGGCTAAAACACCAGGCGGCGGTTGTTCTTTTGGAAGTTGAAAAAAACAAGCGCAACCAGGAAAAAATGGGACGGATTTTAACAGTGGCTGTATAATTTGCACGCCCTGAAGAGCGGGCaaaaaa > 1:1633853/1‑148 (MQ=255) tttGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAgg < 1:2216093/148‑1 (MQ=255) tttGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAgg < 1:697870/148‑1 (MQ=255) tttGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAgg < 1:2111319/148‑1 (MQ=255) tttGATACCACAGTCGATTTTTGGCTAAAACTCCAGGCGGCGGTTGGTAGTTGGGAAGTTGTAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCGGAATATTTGGCCCGCCGTGAAGAGCGTGCAAAAAAgg > 2:3171199/1‑148 (MQ=255) ttGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGt < 1:911307/148‑1 (MQ=255) aTACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGTTGTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTTGCACGCCGTGCAGAGCGTGCCAAAAAGGTcgc > 2:349518/1‑148 (MQ=255) aTACCACAGTCGATTTTTGGCTAAACCACCAGGCGGCGGTTGATCGTTGGGAAGTTGAAAACAACATGCGCCCCCACGCATAAATGGGGCGGATTGAAACAGTGGCGGAATAATTGGCACGCCGTGAAGAGCGGGCAAAAAATGTcgc > 2:741946/1‑148 (MQ=255) aCCACAGTCGATTTTTTGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACCTGCGCACCCAGGAAGAAGTGGGACGGGTTGAAACAGTGGCTGAATATTTTGCACGCCGTGAAGTGGGTGCCAAAAAGGTCGCGt > 2:1628366/1‑148 (MQ=255) cacaGTCGATTTTTTGCTAAACCTCCAGGCGGCGGTTTTTCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGGTGAATATTTTGCACGCCGTGGAGAGCGTGCAAAAAAGGGAGCGTaa > 2:3161538/1‑148 (MQ=255) cacaGTCGATTTTTGGCTAAACCACCAGGCGGCGGTTGTTCATTGGGAACTTTAAAAAAACATGCGCACCCACGCCTAAATGGGACGGAGTGAAACAGTGGCTGAAAATTTGGCACGCCGTGAAGACCCTGCAAAAAACGTCGCGTaa > 2:3161623/1‑148 (MQ=255) gTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTTGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGATCGTGCAAAAAAGGTCGCGTAAGGcc > 1:1332176/1‑148 (MQ=255) cGATTTTTGGCTAAACCTCCATGCGGCGGTTGATCGTTTGGAAGTTGTAAACAACATTCGCACCCAGGAATAATTGGGACGGATTGAAACAGTTGCTGAATATTTTGCACGCCGTGAAGATCGTGCAAAAAAGGTAGCGTAAGGCCaa > 1:1410699/1‑148 (MQ=255) gATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCaaa < 1:522063/148‑1 (MQ=255) aTTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCaaaa > 2:2753132/1‑148 (MQ=255) tttttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAAc > 2:1791527/1‑148 (MQ=255) ttttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTTGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACa > 1:2235901/1‑148 (MQ=255) tttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACAt < 2:1428845/148‑1 (MQ=255) tttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACAt < 2:1437125/148‑1 (MQ=255) tGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCg < 1:1013722/148‑1 (MQ=255) cTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCACACAAGGTCGCGTCCGGCCAAAACATCGCtt > 2:2380357/1‑148 (MQ=255) cTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCtt < 2:39270/148‑1 (MQ=255) aaaCCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGCCGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCa > 1:3092236/1‑148 (MQ=255) aaaCCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCa > 2:2683373/1‑148 (MQ=255) aaCCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGCTTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCAt > 1:2291318/1‑148 (MQ=255) ccTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCAtct > 2:2061640/1‑148 (MQ=255) tCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCg > 1:1534110/1‑148 (MQ=255) tCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCg > 1:382156/1‑148 (MQ=255) ccAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGt < 2:343151/148‑1 (MQ=255) cAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTa < 2:1310114/148‑1 (MQ=255) cAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTa < 1:1122593/148‑1 (MQ=255) cAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACAGGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTa < 2:140642/148‑1 (MQ=255) ggcggcGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAgg > 1:2919248/1‑148 (MQ=255) gcggcgGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGc > 2:132479/1‑148 (MQ=255) gcggcgGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGc > 1:3013586/1‑148 (MQ=255) cggTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGa < 1:2639255/148‑1 (MQ=255) gTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATa < 2:1685683/148‑1 (MQ=255) gTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATa < 1:2529124/148‑1 (MQ=255) ttGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATaa > 1:122586/1‑148 (MQ=255) gATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAgg > 2:1943603/1‑148 (MQ=255) tCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCg < 1:2327382/148‑1 (MQ=255) ttGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTc < 1:2097100/148‑1 (MQ=255) ttGGGAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTc < 2:1766093/148‑1 (MQ=255) ggAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcg > 1:1264748/1‑148 (MQ=255) gAAGTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcgc < 1:1409424/148‑1 (MQ=255) gTTGAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcgccgc < 1:584968/148‑1 (MQ=255) gAAAACAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatc < 2:1275645/148‑1 (MQ=255) aaaCAACATGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccg < 2:1892918/148‑1 (MQ=255) aaaCAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccg > 1:2511914/1‑148 (MQ=255) acaacaTGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggc < 2:2144749/148‑1 (MQ=255) acaTGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcatc > 1:1325601/1‑148 (MQ=255) aTGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcatccg < 2:1147412/148‑1 (MQ=255) tGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCTCCGa > 1:3173967/1‑148 (MQ=255) tGCGCACCCAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGa > 1:912822/1‑148 (MQ=255) aCCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCAcc < 2:2845983/148‑1 (MQ=255) ccAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCAt < 1:1833905/148‑1 (MQ=255) ccAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCAt < 1:2753131/148‑1 (MQ=255) ccAGGAATAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCAt < 1:2753137/148‑1 (MQ=255) ccAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCAt < 2:538754/148‑1 (MQ=255) ggAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGc > 1:3102806/1‑148 (MQ=255) gaataaTTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGcc < 1:668831/148‑1 (MQ=255) gaataaTTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGcc < 1:2299959/148‑1 (MQ=255) gaataaTTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGcc > 1:101301/1‑148 (MQ=255) | GCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGCC > CP009273/503800‑504088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |