| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 601,847 | A→T | 94.5% | I331I (ATT→ATA) | ybdK ← | weak gamma‑glutamyl:cysteine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 601,847 | 0 | A | T | 94.5% | 568.5 / 18.1 | 181 | I331I (ATT→ATA) | ybdK | weak gamma‑glutamyl:cysteine ligase |
| Reads supporting (aligned to +/- strand): ref base A (6/4); new base T (67/104); total (73/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
CTGTAAGGCAATTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGAAACGG > CP009273/601702‑601991 | aGGCAATTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCgcgc > 1:460719/1‑148 (MQ=255) ggCAATTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCt < 1:640548/148‑1 (MQ=255) gttCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGAt > 2:1789388/2‑148 (MQ=255) aTTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGAt < 2:932162/148‑1 (MQ=255) aTTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGAt > 2:716731/1‑148 (MQ=255) tCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGc < 1:1002908/148‑1 (MQ=255) tCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGc > 2:2051030/1‑148 (MQ=255) tCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGc > 2:1253704/1‑148 (MQ=255) tCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGc < 1:2113687/148‑1 (MQ=255) tCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGc < 1:1002907/148‑1 (MQ=255) ggCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCa > 2:428585/1‑148 (MQ=255) gCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCaa > 2:3074085/1‑148 (MQ=255) aGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAAtttt < 2:2708738/148‑1 (MQ=255) gTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTa < 2:347956/148‑1 (MQ=255) tCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTAt < 1:1572928/148‑1 (MQ=255) cACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTAtg < 2:2450978/148‑1 (MQ=255) ccGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTAtgtg > 2:2914359/1‑148 (MQ=255) ccGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTAtgtg < 1:2776094/148‑1 (MQ=255) ccGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTAtgtg > 2:2090969/1‑148 (MQ=255) cGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGc > 1:286116/1‑148 (MQ=255) cccAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGa < 2:3116885/148‑1 (MQ=255) ccAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGaa < 2:637614/148‑1 (MQ=255) ccAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGaa < 1:866289/148‑1 (MQ=255) ccAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGaa < 1:860720/148‑1 (MQ=255) cAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAg < 1:1527503/148‑1 (MQ=255) cAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAg > 2:422038/1‑148 (MQ=255) cAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAg > 2:726473/1‑148 (MQ=255) cAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAg < 1:1527473/148‑1 (MQ=255) aGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGaacg < 2:2844653/148‑3 (MQ=255) aGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAgg < 2:1256245/148‑1 (MQ=255) aGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAgg < 2:885892/148‑1 (MQ=255) gATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAggg > 2:3154847/1‑148 (MQ=255) gATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAggg > 2:1600472/1‑148 (MQ=255) ctcACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCg > 1:2373067/1‑148 (MQ=255) ctcACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCg > 1:2373148/1‑148 (MQ=255) ctcACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCg < 2:1551028/148‑1 (MQ=255) cacaATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAt > 1:2988922/1‑148 (MQ=255) cacaATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAt > 1:3106498/1‑148 (MQ=255) acaATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAtt > 1:20085/1‑148 (MQ=255) caATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAttt < 1:1604426/148‑1 (MQ=255) caATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAttt < 1:1604519/148‑1 (MQ=255) aaTGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAtttt > 1:1179585/1‑148 (MQ=255) aTGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCCCCAATTTTCTGTGCGGAAGGGGCGAttttt < 2:1125778/148‑1 (MQ=255) aTGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGAttttt > 2:724659/1‑148 (MQ=255) tGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGGAGGGGCGAtttttt < 2:764741/148‑1 (MQ=255) gCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTc < 2:384211/148‑1 (MQ=255) cTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTcc < 2:825119/148‑1 (MQ=255) cTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTcc < 2:2523283/148‑1 (MQ=255) cTTGTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTCTGTGCGGAAGGGGCGATTTTTTcc < 2:2483872/148‑1 (MQ=255) ttCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCa < 1:243759/148‑1 (MQ=255) cAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGc > 1:2134331/1‑148 (MQ=255) gCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCaa > 2:1394158/1‑148 (MQ=255) cccAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAg > 1:56406/1‑148 (MQ=255) cccAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAg > 1:583577/1‑148 (MQ=255) cAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGt > 1:1818836/1‑148 (MQ=255) cAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGt < 1:3182505/148‑1 (MQ=255) cAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGt < 1:3301979/148‑1 (MQ=255) aaTCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTa > 2:2638335/1‑148 (MQ=255) aTCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTAt < 2:2387770/148‑1 (MQ=255) tCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATc < 2:643650/148‑1 (MQ=255) tCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATc < 2:3000125/148‑1 (MQ=255) tCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATc < 1:2774688/148‑1 (MQ=255) gAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCg < 2:1366744/148‑1 (MQ=255) gAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCg < 2:2707579/148‑1 (MQ=255) gccgccATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGtt > 1:2458561/1‑148 (MQ=255) ccgccATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTa > 1:2164979/1‑148 (MQ=255) ccgccATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTa > 1:2645507/1‑148 (MQ=255) cATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCgg < 1:1618356/148‑1 (MQ=255) aTCGTCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGt < 1:900019/148‑1 (MQ=255) tCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTc > 2:2258306/1‑148 (MQ=255) tCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTc > 2:596584/1‑148 (MQ=255) acgaAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGAt < 2:2006403/148‑1 (MQ=255) aaaTCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGAtctc < 2:2804799/148‑1 (MQ=255) gcgcATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAgtg < 2:2134331/148‑1 (MQ=255) cgcATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAgtgt < 1:226489/148‑1 (MQ=255) cgcATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAgtgt < 1:226525/148‑1 (MQ=255) cATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGc < 1:1521970/148‑1 (MQ=255) cATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGc < 1:1521350/148‑1 (MQ=255) tAGCTGCGCTTCTTTCAGACCGCTGACGCGCTGTCGAGGCAGGGGCTGTATCGCGCTCGATGCACCAATTTGATNTGCTGAAGGGGGGATTTTTTCCAGCAATCGGAAGGTATCTTCCGTTAGAGGTCGACGATCTCCAGTGTGCGGa < 1:1679200/148‑1 (MQ=255) aGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGAt > 2:818676/1‑148 (MQ=255) gcgcTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGt < 1:1507696/148‑1 (MQ=255) cgcTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGtg < 2:330260/148‑1 (MQ=255) cgcTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGtg < 2:1847772/148‑1 (MQ=255) cgcTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGtg < 1:170864/148‑1 (MQ=255) tcaGACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGcc < 1:1253704/148‑1 (MQ=255) gACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTc > 2:3305914/1‑148 (MQ=255) gACCGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGGATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTc > 1:2516551/1‑148 (MQ=255) ccGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCaa < 1:422038/148‑1 (MQ=255) ccGCTGACGACCTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCaa > 2:1863568/1‑148 (MQ=255) cTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGa < 2:514772/148‑1 (MQ=255) cTGGCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGa < 2:1362759/148‑1 (MQ=255) tGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGAc < 1:52988/148‑1 (MQ=255) ggCGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACa > 2:658515/1‑148 (MQ=255) cGATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAgg < 2:3201944/148‑1 (MQ=255) gATGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCACTCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGc < 1:2647552/148‑1 (MQ=255) aTGCAGGGCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGcc < 1:684788/148‑1 (MQ=255) ggCCTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGaaa > 2:30454/1‑148 (MQ=255) ccTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGAAACg < 2:2140849/148‑1 (MQ=255) ccTCTATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGAAACg > 1:3053370/1‑148 (MQ=255) ctctATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGAAACgg < 2:2882578/148‑1 (MQ=255) | CTGTAAGGCAATTCCCGGCTTAGTCACCGGCCCAGATCTCACAATGCTTTTTCACCAGCCCAATCAGCGAGCCGCCATCGGCGACGAAATCGCGCATTAGCTGCGCTTCATTCAGACCGCTGACGACCTGGCGATGCAGGGCCTCAATCGCGCTCGATGCACCAATTTTATGTGCGGAAGGGGCGATTTTTTCCAGCAATCGCAAGGTATCTTCCGTTAGCGGTCGACGATCTCCAGTGTGCGGATCGGTGATGACGCCTTCAAGCCCATAGCGACAGGCCTGGAAACGG > CP009273/601702‑601991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |