| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 809,212 | G→T | 92.4% | M77I (ATG→ATT) | uvrB → | excinulease of nucleotide excision repair, DNA damage recognition component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 809,212 | 0 | G | T | 92.4% | 472.1 / 31.7 | 171 | M77I (ATG→ATT) | uvrB | excinulease of nucleotide excision repair, DNA damage recognition component |
| Reads supporting (aligned to +/- strand): ref base G (4/9); new base T (67/91); total (71/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
AAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTCCG > CP009273/809067‑809357 | aaGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTaa > 1:1965500/1‑148 (MQ=255) gATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAag < 2:566633/148‑1 (MQ=255) aaggCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACAATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGAATGTCGAAATTAAaga > 2:1715761/3‑148 (MQ=255) aTGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAACACGCTGGCGGCCCAGCTGTATGGCGAAATTAAaga < 2:1136527/148‑1 (MQ=255) aTGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAaga > 2:1716513/1‑148 (MQ=255) tGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAagag < 2:225038/148‑1 (MQ=255) ggCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGt > 1:2726457/1‑148 (MQ=255) gcgcACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTcc > 2:2140142/1‑148 (MQ=255) gcgcACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTcc < 2:3019428/148‑1 (MQ=255) cgcACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTccc < 1:3165081/148‑1 (MQ=255) ccAGACGTTACTTGGCGTGACAGGCTCAGGGAAAACCTTCACCATTGCCAATGTCAATGCTGACCTTCAGCGCCCCACCATGGTACTTGCGCCCAACAAAACGCTCGCGGCCCAGCAGAATGGCGCAATTAAAGAGTTCTTCCCGCaa > 2:2535814/1‑148 (MQ=255) cAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaa < 1:3301930/148‑1 (MQ=255) cAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaa < 1:3301797/148‑1 (MQ=255) aGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAGCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaaa > 2:2356920/1‑148 (MQ=255) aGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaaa < 2:92857/148‑1 (MQ=255) aGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaaa < 2:40018/148‑1 (MQ=255) cGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAAcgc > 1:236779/1‑148 (MQ=255) ttACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCgg > 1:251468/1‑148 (MQ=255) tGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGaa < 1:2307635/148‑1 (MQ=255) gCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAata < 2:2334969/148‑1 (MQ=255) cGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAatat < 1:1621999/148‑1 (MQ=255) cGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAatat < 1:2911022/148‑1 (MQ=255) tGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATAttt < 1:1492697/148‑1 (MQ=255) tGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATAttt < 2:773859/148‑1 (MQ=255) tGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATAttt < 1:1166929/148‑1 (MQ=255) cAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCcta < 2:555022/148‑1 (MQ=255) aGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctac < 2:649907/148‑1 (MQ=255) aGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctac < 2:908731/148‑1 (MQ=255) ggAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctacta > 1:1788055/1‑148 (MQ=255) aCCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGact > 2:1256702/1‑148 (MQ=255) cTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAACCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGactac < 2:422751/148‑1 (MQ=255) cTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGactac > 2:1102606/1‑148 (MQ=255) ttCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGactact < 1:377517/148‑1 (MQ=255) aCCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATc < 1:1319280/148‑1 (MQ=255) tGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCg < 1:373357/148‑1 (MQ=255) gCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCgg < 1:2509389/148‑1 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc > 2:2583334/1‑148 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc < 2:2944801/148‑1 (MQ=255) tGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGcc > 1:1146108/1‑148 (MQ=255) gTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCt > 1:1828328/1‑148 (MQ=255) cATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTAt > 1:274717/1‑148 (MQ=255) cATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTAt > 1:813991/1‑148 (MQ=255) cATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTAt > 1:3071646/1‑148 (MQ=255) cATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTAt > 2:2545306/1‑148 (MQ=255) cATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTAt > 1:1428500/1‑148 (MQ=255) aTTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATg > 1:1923148/1‑148 (MQ=255) tGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTa > 1:1527553/1‑148 (MQ=255) tGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTa > 1:365619/1‑148 (MQ=255) tGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTa < 1:2445567/148‑1 (MQ=255) gCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTAc < 1:1077365/148‑1 (MQ=255) gCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTAc < 1:1076996/148‑1 (MQ=255) aCCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAg < 2:52466/148‑1 (MQ=255) ccTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGt > 2:1154388/1‑148 (MQ=255) ttCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTc > 1:975787/1‑148 (MQ=255) tCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTcc > 1:1125477/1‑148 (MQ=255) cgcCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGaca > 2:3070127/1‑148 (MQ=255) cgcCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGaca > 1:1987344/1‑148 (MQ=255) gcCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGacac < 2:2448858/148‑1 (MQ=255) cccAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt < 2:1333476/148‑1 (MQ=255) cccAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt > 1:2131746/1‑148 (MQ=255) ccAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACtt > 2:14120/1‑148 (MQ=255) ccAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACtt < 2:2027899/148‑1 (MQ=255) cAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACttt > 2:1772014/1‑148 (MQ=255) aaCCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTc > 2:2512052/1‑148 (MQ=255) ccATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCAt > 1:124132/1‑148 (MQ=255) ccATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTAAt < 2:3247318/148‑1 (MQ=255) tGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTga > 2:729455/1‑148 (MQ=255) tACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGaa < 2:2155172/148‑1 (MQ=255) aacaacCCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCgg < 2:3010220/148‑1 (MQ=255) aacaaAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCgg < 2:1362843/148‑1 (MQ=255) caaAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGtt > 1:1250742/1‑148 (MQ=255) caaAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGtt > 2:2794826/1‑148 (MQ=255) aaaCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTaa < 1:3080179/148‑1 (MQ=255) aaaCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTaa < 1:860710/148‑1 (MQ=255) aaaCGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTaa > 2:3302034/1‑148 (MQ=255) cTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAAc < 1:1905720/148‑1 (MQ=255) cTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAAc < 1:253793/148‑1 (MQ=255) tGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACa < 1:2704326/148‑1 (MQ=255) tGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACa < 2:2821984/148‑1 (MQ=255) ggcggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACat < 2:1656039/148‑1 (MQ=255) ggcggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACat < 1:2152130/148‑1 (MQ=255) ggcggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACat < 1:2604618/148‑1 (MQ=255) cggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACatat < 1:2564103/148‑1 (MQ=255) cggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACatat < 1:520299/148‑1 (MQ=255) gcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTg < 1:2664666/148‑1 (MQ=255) cAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGc < 2:1787660/148‑1 (MQ=255) cAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGc < 2:1787658/148‑1 (MQ=255) cAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGc < 2:1787668/148‑1 (MQ=255) cAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGc < 1:2923115/148‑1 (MQ=255) gCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAg < 2:1080649/148‑1 (MQ=255) cTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGa < 2:1495890/148‑1 (MQ=255) tGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGAt < 1:425273/148‑1 (MQ=255) gTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATg > 1:3015716/1‑148 (MQ=255) gTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATg > 1:2924177/1‑148 (MQ=255) gTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATg < 1:1608622/148‑1 (MQ=255) tGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGt > 2:2033361/1‑148 (MQ=255) tGGCGAAATTAAAGAGTTCGTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGt < 2:1965500/148‑1 (MQ=255) ggCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGtt < 2:2087968/148‑1 (MQ=255) gAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGt < 2:1270496/148‑1 (MQ=255) aTGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTCCg > 1:2030550/1‑148 (MQ=255) | AAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTCCG > CP009273/809067‑809357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |